RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
TRA2B-214ENST00000487615 HRES1P13985 223 aa6.97□□□□□ -1.29
TRA2B-214ENST00000487615 ANK3Q12955 4377 aaKnown RBP6.97□□□□□ -1.29
TRA2B-214ENST00000487615 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-214ENST00000487615 LCE6AA0A183 80 aa6.95□□□□□ -1.3
TRA2B-214ENST00000487615 A0A087X002 238 aa6.94□□□□□ -1.3
TRA2B-214ENST00000487615 UQCR11O14957 56 aa6.94□□□□□ -1.3
TRA2B-214ENST00000487615 Q5W150 140 aa6.93□□□□□ -1.3
TRA2B-214ENST00000487615 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
TRA2B-214ENST00000487615 PKD1L1Q8TDX9 2849 aa6.92□□□□□ -1.3
TRA2B-214ENST00000487615 Q8N1X5 172 aa6.92□□□□□ -1.3
TRA2B-214ENST00000487615 VPS13CQ709C8 3753 aa6.9□□□□□ -1.3
TRA2B-214ENST00000487615 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
TRA2B-214ENST00000487615 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
TRA2B-214ENST00000487615 LINC01558Q9Y6Z2 57 aa6.87□□□□□ -1.31
TRA2B-214ENST00000487615 Q75L30 129 aa6.86□□□□□ -1.31
TRA2B-214ENST00000487615 CDC42SE1Q9NRR8 79 aa6.86□□□□□ -1.31
TRA2B-214ENST00000487615 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
TRA2B-214ENST00000487615 TRRAPQ9Y4A5 3859 aa6.84□□□□□ -1.31
TRA2B-214ENST00000487615 Q5VV11 94 aa6.83□□□□□ -1.32
TRA2B-214ENST00000487615 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
TRA2B-214ENST00000487615 TGP01266 2768 aa6.8□□□□□ -1.32
TRA2B-214ENST00000487615 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
TRA2B-214ENST00000487615 DMBT1Q9UGM3 2413 aaPredicted RBP6.8□□□□□ -1.32
TRA2B-214ENST00000487615 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
TRA2B-214ENST00000487615 TENM2Q9NT68 2774 aa6.78□□□□□ -1.32
TRA2B-214ENST00000487615 ZNF469Q96JG9 3925 aaPredicted RBP6.77□□□□□ -1.33
TRA2B-214ENST00000487615 Q6ZSA8 131 aa6.75□□□□□ -1.33
TRA2B-214ENST00000487615 J3QL48 77 aa6.74□□□□□ -1.33
TRA2B-214ENST00000487615 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
TRA2B-214ENST00000487615 SPINK7P58062 85 aa6.73□□□□□ -1.33
TRA2B-214ENST00000487615 RPS29P62273 56 aaKnown RBP6.72□□□□□ -1.33
TRA2B-214ENST00000487615 Q5VSD8 79 aa6.72□□□□□ -1.33
TRA2B-214ENST00000487615 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
TRA2B-214ENST00000487615 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.35
TRA2B-214ENST00000487615 A0A1B0GU33 70 aa6.64□□□□□ -1.35
TRA2B-214ENST00000487615 FLG2Q5D862 2391 aaPredicted RBP6.62□□□□□ -1.35
TRA2B-214ENST00000487615 LCA10Q71F78 164 aa6.58□□□□□ -1.36
TRA2B-214ENST00000487615 AKAP9Q99996 3911 aa6.58□□□□□ -1.36
TRA2B-214ENST00000487615 COX6B2Q6YFQ2 88 aa6.56□□□□□ -1.36
TRA2B-214ENST00000487615 A0A0D9SG42 100 aa6.56□□□□□ -1.36
TRA2B-214ENST00000487615 S4R3F8 94 aa6.53□□□□□ -1.36
TRA2B-214ENST00000487615 FBN3Q75N90 2809 aa6.5□□□□□ -1.37
TRA2B-214ENST00000487615 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
TRA2B-214ENST00000487615 A8MUU9 505 aa6.49□□□□□ -1.37
TRA2B-214ENST00000487615 C20orf166-AS1Q96NR2 134 aa6.48□□□□□ -1.37
TRA2B-214ENST00000487615 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
TRA2B-214ENST00000487615 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
TRA2B-214ENST00000487615 KRTAP16-1A8MUX0 517 aa6.47□□□□□ -1.37
TRA2B-214ENST00000487615 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.37
TRA2B-214ENST00000487615 A8MU10 97 aa6.46□□□□□ -1.37
TRA2B-214ENST00000487615 SPATA8Q6RVD6 105 aa6.46□□□□□ -1.37
TRA2B-214ENST00000487615 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
TRA2B-214ENST00000487615 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
TRA2B-214ENST00000487615 PRAC1Q96KF2 57 aa6.44□□□□□ -1.38
TRA2B-214ENST00000487615 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
TRA2B-214ENST00000487615 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
TRA2B-214ENST00000487615 HUWE1Q7Z6Z7 4374 aaKnown RBP6.41□□□□□ -1.38
TRA2B-214ENST00000487615 RPL37P61927 97 aaKnown RBP6.4□□□□□ -1.38
TRA2B-214ENST00000487615 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
TRA2B-214ENST00000487615 A6NN06 94 aa6.38□□□□□ -1.39
TRA2B-214ENST00000487615 A0A1B0GVY2 172 aa6.35□□□□□ -1.39
TRA2B-214ENST00000487615 R4GN34 69 aa6.29□□□□□ -1.4
TRA2B-214ENST00000487615 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
TRA2B-214ENST00000487615 COL7A1Q02388 2944 aa6.28□□□□□ -1.4
TRA2B-214ENST00000487615 XP32Q5T750 250 aa6.27□□□□□ -1.41
TRA2B-214ENST00000487615 ROMO1P60602 79 aa6.23□□□□□ -1.41
TRA2B-214ENST00000487615 DNAH9Q9NYC9 4486 aa6.22□□□□□ -1.41
TRA2B-214ENST00000487615 M0QZ58 72 aa6.21□□□□□ -1.41
TRA2B-214ENST00000487615 KRTAP10-8P60410 259 aa6.21□□□□□ -1.42
TRA2B-214ENST00000487615 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.42
TRA2B-214ENST00000487615 CSMD3Q7Z407 3707 aa6.17□□□□□ -1.42
TRA2B-214ENST00000487615 M0R2T5 61 aa6.15□□□□□ -1.43
TRA2B-214ENST00000487615 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
TRA2B-214ENST00000487615 H0YAA0 97 aa6.11□□□□□ -1.43
TRA2B-214ENST00000487615 PLECQ15149 4684 aaKnown RBP6.1□□□□□ -1.43
TRA2B-214ENST00000487615 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
TRA2B-214ENST00000487615 DNAH10Q8IVF4 4471 aa6.04□□□□□ -1.44
TRA2B-214ENST00000487615 KRTAP3-1Q9BYR8 98 aa6.01□□□□□ -1.45
TRA2B-214ENST00000487615 DNAH1Q9P2D7 4330 aa6.01□□□□□ -1.45
TRA2B-214ENST00000487615 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
TRA2B-214ENST00000487615 VPS13DQ5THJ4 4388 aa5.98□□□□□ -1.45
TRA2B-214ENST00000487615 P0C880 135 aa5.96□□□□□ -1.46
TRA2B-214ENST00000487615 STARD9Q9P2P6 4700 aa5.95□□□□□ -1.46
TRA2B-214ENST00000487615 ANK2Q01484 3957 aa5.92□□□□□ -1.46
TRA2B-214ENST00000487615 DNAH3Q8TD57 4116 aa5.92□□□□□ -1.46
TRA2B-214ENST00000487615 DNAH11Q96DT5 4516 aa5.91□□□□□ -1.46
TRA2B-214ENST00000487615 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.46
TRA2B-214ENST00000487615 DNAH17Q9UFH2 4485 aa5.9□□□□□ -1.46
TRA2B-214ENST00000487615 DNHD1Q96M86 4753 aa5.9□□□□□ -1.46
TRA2B-214ENST00000487615 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
TRA2B-214ENST00000487615 PRKDCP78527 4128 aaKnown RBP5.89□□□□□ -1.47
TRA2B-214ENST00000487615 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
TRA2B-214ENST00000487615 PLAC4Q8WY50 150 aa5.86□□□□□ -1.47
TRA2B-214ENST00000487615 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
TRA2B-214ENST00000487615 CMYA5Q8N3K9 4069 aa5.83□□□□□ -1.48
TRA2B-214ENST00000487615 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
TRA2B-214ENST00000487615 H3BS24 57 aa5.77□□□□□ -1.49
TRA2B-214ENST00000487615 DNAH2Q9P225 4427 aa5.77□□□□□ -1.49
TRA2B-214ENST00000487615 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms