RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.06□□□□□ -1.76
HOXA9-204ENST00000487384 ATOH7Q8N100 152 aa4.06□□□□□ -1.76
HOXA9-204ENST00000487384 NEBP20929 6669 aa4.06□□□□□ -1.76
HOXA9-204ENST00000487384 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
HOXA9-204ENST00000487384 COLCA2A8K830 154 aa4.05□□□□□ -1.76
HOXA9-204ENST00000487384 LINC00313P59037 77 aa4.05□□□□□ -1.76
HOXA9-204ENST00000487384 KRTDAPP60985 99 aa4.05□□□□□ -1.76
HOXA9-204ENST00000487384 Q8N9P0 234 aaPredicted RBP4.05□□□□□ -1.76
HOXA9-204ENST00000487384 C9JAW5 83 aa4.04□□□□□ -1.76
HOXA9-204ENST00000487384 HSD52Q0P140 79 aa4.04□□□□□ -1.76
HOXA9-204ENST00000487384 BATFQ16520 125 aa4.04□□□□□ -1.76
HOXA9-204ENST00000487384 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
HOXA9-204ENST00000487384 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BKO60814 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BJP06899 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BOP23527 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BBP33778 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BDP58876 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BCP62807 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST2H2BEQ16778 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.03□□□□□ -1.76
HOXA9-204ENST00000487384 PPDPFLQ8WWR9 84 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BHQ93079 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BNQ99877 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 HIST1H2BMQ99879 126 aa4.03□□□□□ -1.76
HOXA9-204ENST00000487384 PMAIP1Q13794 54 aa4.02□□□□□ -1.77
HOXA9-204ENST00000487384 IGKV4-1P06312 121 aa4.01□□□□□ -1.77
HOXA9-204ENST00000487384 A8MWP4 228 aa4□□□□□ -1.77
HOXA9-204ENST00000487384 NDUFV3P56181 108 aaKnown RBP4□□□□□ -1.77
HOXA9-204ENST00000487384 DEFB116Q30KQ4 102 aa4□□□□□ -1.77
HOXA9-204ENST00000487384 BVES-AS1Q5T3Y7 98 aa4□□□□□ -1.77
HOXA9-204ENST00000487384 H3BMG7 143 aa3.99□□□□□ -1.77
HOXA9-204ENST00000487384 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
HOXA9-204ENST00000487384 LYRM7Q5U5X0 104 aa3.99□□□□□ -1.77
HOXA9-204ENST00000487384 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
HOXA9-204ENST00000487384 IGHV6-1A0A0B4J1U7 121 aa3.98□□□□□ -1.77
HOXA9-204ENST00000487384 A0A1W2PNM2 257 aa3.98□□□□□ -1.77
HOXA9-204ENST00000487384 HIST3H2BBQ8N257 126 aa3.98□□□□□ -1.77
HOXA9-204ENST00000487384 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
HOXA9-204ENST00000487384 KRTAP4-7Q9BYR0 210 aa3.98□□□□□ -1.77
HOXA9-204ENST00000487384 SPINK7P58062 85 aa3.96□□□□□ -1.78
HOXA9-204ENST00000487384 ANKRD29Q8N6D5 301 aa3.96□□□□□ -1.78
HOXA9-204ENST00000487384 FAM218AQ96MZ4 157 aa3.96□□□□□ -1.78
HOXA9-204ENST00000487384 FABP2P12104 132 aa3.95□□□□□ -1.78
HOXA9-204ENST00000487384 SNCGO76070 127 aa3.94□□□□□ -1.78
HOXA9-204ENST00000487384 WFDC13Q8IUB5 93 aa3.94□□□□□ -1.78
HOXA9-204ENST00000487384 ZCCHC13Q8WW36 166 aaKnown RBP3.94□□□□□ -1.78
HOXA9-204ENST00000487384 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
HOXA9-204ENST00000487384 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
HOXA9-204ENST00000487384 CCDC179H3BU77 68 aa3.92□□□□□ -1.78
HOXA9-204ENST00000487384 HIST1H4GQ99525 98 aa3.92□□□□□ -1.78
HOXA9-204ENST00000487384 LINC00472Q9H8W2 130 aa3.92□□□□□ -1.78
HOXA9-204ENST00000487384 TRBV7-4A0A0J9YYF1 115 aa3.91□□□□□ -1.78
HOXA9-204ENST00000487384 COA6Q5JTJ3 125 aaKnown RBP3.91□□□□□ -1.78
HOXA9-204ENST00000487384 HIST1H2BLQ99880 126 aa3.91□□□□□ -1.78
HOXA9-204ENST00000487384 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
HOXA9-204ENST00000487384 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
HOXA9-204ENST00000487384 A6NN06 94 aa3.9□□□□□ -1.79
HOXA9-204ENST00000487384 H0YGX0 51 aa3.9□□□□□ -1.79
HOXA9-204ENST00000487384 Q6ZVQ6 151 aa3.9□□□□□ -1.79
HOXA9-204ENST00000487384 C8orf87E5RJ46 101 aa3.89□□□□□ -1.79
HOXA9-204ENST00000487384 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
HOXA9-204ENST00000487384 TRACP01848 142 aa3.88□□□□□ -1.79
HOXA9-204ENST00000487384 CCKP06307 115 aa3.88□□□□□ -1.79
HOXA9-204ENST00000487384 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
HOXA9-204ENST00000487384 K7EP34 96 aa3.87□□□□□ -1.79
HOXA9-204ENST00000487384 TMEM258P61165 79 aa3.87□□□□□ -1.79
HOXA9-204ENST00000487384 PSMB2P49721 201 aa3.86□□□□□ -1.79
HOXA9-204ENST00000487384 KMT2DO14686 5537 aa3.86□□□□□ -1.79
HOXA9-204ENST00000487384 FAM236AA0A1B0GUQ0 79 aa3.85□□□□□ -1.79
HOXA9-204ENST00000487384 FAM236BA0A1B0GV22 79 aa3.85□□□□□ -1.79
HOXA9-204ENST00000487384 TAX1BP3O14907 124 aa3.85□□□□□ -1.79
HOXA9-204ENST00000487384 NDUFS5O43920 106 aa3.85□□□□□ -1.79
HOXA9-204ENST00000487384 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
HOXA9-204ENST00000487384 A0A0B4J2C4 111 aa3.84□□□□□ -1.79
HOXA9-204ENST00000487384 PRR15Q8IV56 129 aa3.84□□□□□ -1.79
HOXA9-204ENST00000487384 IMUPQ9GZP8 106 aa3.84□□□□□ -1.79
HOXA9-204ENST00000487384 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HOXA9-204ENST00000487384 BRK1Q8WUW1 75 aa3.83□□□□□ -1.8
HOXA9-204ENST00000487384 ORMDL1Q9P0S3 153 aa3.83□□□□□ -1.8
HOXA9-204ENST00000487384 UQCRQO14949 82 aa3.82□□□□□ -1.8
HOXA9-204ENST00000487384 DNAL4O96015 105 aa3.82□□□□□ -1.8
HOXA9-204ENST00000487384 MT1BP07438 61 aa3.82□□□□□ -1.8
HOXA9-204ENST00000487384 COX8AP10176 69 aa3.82□□□□□ -1.8
HOXA9-204ENST00000487384 F8W1H4 67 aa3.81□□□□□ -1.8
HOXA9-204ENST00000487384 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
HOXA9-204ENST00000487384 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
HOXA9-204ENST00000487384 IGKV3D-7A0A0C4DH55 119 aa3.8□□□□□ -1.8
HOXA9-204ENST00000487384 Q5VV11 94 aa3.8□□□□□ -1.8
HOXA9-204ENST00000487384 PRO1854Q9UHT4 67 aa3.8□□□□□ -1.8
HOXA9-204ENST00000487384 TMEM256-PLSCR3K7ERE1 68 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 NDUFB1O75438 58 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 SPATA45Q537H7 98 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 C8orf17Q9NRJ1 99 aa3.79□□□□□ -1.8
HOXA9-204ENST00000487384 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
HOXA9-204ENST00000487384 DSCR8Q96T75 97 aa3.78□□□□□ -1.8
HOXA9-204ENST00000487384 SPCS1Q9Y6A9 102 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms