RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SNURFQ9Y675 71 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 KIF25-AS1Q9Y6Z4 181 aa3.3□□□□□ -1.88
SF1-217ENST00000486960 DEFB131AP59861 70 aa3.29□□□□□ -1.88
SF1-217ENST00000486960 LINC00322Q6ZN03 302 aaPredicted RBP3.29□□□□□ -1.88
SF1-217ENST00000486960 M0R2N4 97 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 SPINK4O60575 86 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 DNAL4O96015 105 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 SLPIP03973 132 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 CRIP1P50238 77 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 PRR9Q5T870 116 aa3.28□□□□□ -1.88
SF1-217ENST00000486960 A8MTW9 85 aa3.27□□□□□ -1.89
SF1-217ENST00000486960 F8VRH5 84 aa3.27□□□□□ -1.89
SF1-217ENST00000486960 IGKV3-20P01619 116 aa3.27□□□□□ -1.89
SF1-217ENST00000486960 Q6ZTI0 123 aa3.27□□□□□ -1.89
SF1-217ENST00000486960 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
SF1-217ENST00000486960 TRBV30A0A0K0K1B3 111 aa3.26□□□□□ -1.89
SF1-217ENST00000486960 A0A1B0GUT8 65 aa3.26□□□□□ -1.89
SF1-217ENST00000486960 SMR3BP02814 79 aaPredicted RBP3.26□□□□□ -1.89
SF1-217ENST00000486960 COX7B2Q8TF08 81 aa3.26□□□□□ -1.89
SF1-217ENST00000486960 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
SF1-217ENST00000486960 R4GN34 69 aa3.26□□□□□ -1.89
SF1-217ENST00000486960 NDUFB1O75438 58 aa3.25□□□□□ -1.89
SF1-217ENST00000486960 SPINK13Q1W4C9 94 aa3.25□□□□□ -1.89
SF1-217ENST00000486960 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
SF1-217ENST00000486960 IGKV2D-30A0A075B6S6 120 aa3.24□□□□□ -1.89
SF1-217ENST00000486960 A0A087WVE0 104 aa3.24□□□□□ -1.89
SF1-217ENST00000486960 KRTAP5-3Q6L8H2 238 aa3.24□□□□□ -1.89
SF1-217ENST00000486960 LINC00612Q8N6U2 182 aa3.24□□□□□ -1.89
SF1-217ENST00000486960 LINC01558Q9Y6Z2 57 aa3.24□□□□□ -1.89
SF1-217ENST00000486960 IGKV3D-7A0A0C4DH55 119 aa3.23□□□□□ -1.89
SF1-217ENST00000486960 PDE6GP18545 87 aa3.23□□□□□ -1.89
SF1-217ENST00000486960 NEBP20929 6669 aa3.23□□□□□ -1.89
SF1-217ENST00000486960 FCER1GP30273 86 aa3.23□□□□□ -1.89
SF1-217ENST00000486960 CCL18P55774 89 aa3.23□□□□□ -1.89
SF1-217ENST00000486960 UQCR11O14957 56 aa3.22□□□□□ -1.89
SF1-217ENST00000486960 MGPP08493 103 aa3.22□□□□□ -1.89
SF1-217ENST00000486960 CNFNQ9BYD5 112 aa3.22□□□□□ -1.89
SF1-217ENST00000486960 JMJD7-PLA2G4BH0Y9G9 81 aa3.21□□□□□ -1.9
SF1-217ENST00000486960 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
SF1-217ENST00000486960 LINC00846Q9NV44 126 aa3.21□□□□□ -1.9
SF1-217ENST00000486960 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
SF1-217ENST00000486960 TRAV21A0A0B4J279 112 aa3.2□□□□□ -1.9
SF1-217ENST00000486960 TRBV6-4A0A1B0GX49 114 aa3.2□□□□□ -1.9
SF1-217ENST00000486960 HAMPP81172 84 aa3.2□□□□□ -1.9
SF1-217ENST00000486960 APLNQ9ULZ1 77 aa3.2□□□□□ -1.9
SF1-217ENST00000486960 HTN1P15515 57 aa3.19□□□□□ -1.9
SF1-217ENST00000486960 NREPQ16612 68 aa3.19□□□□□ -1.9
SF1-217ENST00000486960 DEFB135Q30KP9 77 aa3.19□□□□□ -1.9
SF1-217ENST00000486960 TIMM8BQ9Y5J9 83 aaPredicted RBP3.19□□□□□ -1.9
SF1-217ENST00000486960 USH2AO75445 5202 aa3.19□□□□□ -1.9
SF1-217ENST00000486960 IGKV3OR2-268A0A0C4DH90 116 aa3.18□□□□□ -1.9
SF1-217ENST00000486960 LRCOL1A6NCL2 159 aa3.18□□□□□ -1.9
SF1-217ENST00000486960 DEFB4AO15263 64 aa3.18□□□□□ -1.9
SF1-217ENST00000486960 MT1HL1P0DM35 61 aa3.18□□□□□ -1.9
SF1-217ENST00000486960 PLNP26678 52 aa3.18□□□□□ -1.9
SF1-217ENST00000486960 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 H0Y9P7 68 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 LINC00315P59091 139 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 C14orf177Q52M58 125 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 TMEM263Q8WUH6 116 aaKnown RBP3.17□□□□□ -1.9
SF1-217ENST00000486960 LINC00208Q96KT6 92 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 NOP10Q9NPE3 64 aaKnown RBP3.17□□□□□ -1.9
SF1-217ENST00000486960 PLAC8Q9NZF1 115 aa3.17□□□□□ -1.9
SF1-217ENST00000486960 MACF1Q9UPN3 7388 aaKnown RBP3.17□□□□□ -1.9
SF1-217ENST00000486960 K7EMI3 77 aa3.16□□□□□ -1.9
SF1-217ENST00000486960 HRES1P13985 223 aa3.16□□□□□ -1.9
SF1-217ENST00000486960 UBL5Q9BZL1 73 aa3.16□□□□□ -1.9
SF1-217ENST00000486960 TRGV1A0A0A0MS02 117 aa3.15□□□□□ -1.91
SF1-217ENST00000486960 DEFB130BP0DP73 79 aa3.14□□□□□ -1.91
SF1-217ENST00000486960 DEFB130AP0DP74 79 aa3.14□□□□□ -1.91
SF1-217ENST00000486960 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
SF1-217ENST00000486960 COX17Q14061 63 aa3.14□□□□□ -1.91
SF1-217ENST00000486960 KRTAP9-8Q9BYQ0 159 aa3.14□□□□□ -1.91
SF1-217ENST00000486960 ENHOQ6UWT2 76 aa3.13□□□□□ -1.91
SF1-217ENST00000486960 DEFB104AQ8WTQ1 72 aa3.13□□□□□ -1.91
SF1-217ENST00000486960 RPL39LQ96EH5 51 aaKnown RBP3.13□□□□□ -1.91
SF1-217ENST00000486960 SPRR4Q96PI1 79 aa3.13□□□□□ -1.91
SF1-217ENST00000486960 A0A0G2JQZ4 141 aa3.12□□□□□ -1.91
SF1-217ENST00000486960 A0A1W2PNN7 141 aa3.12□□□□□ -1.91
SF1-217ENST00000486960 M0QY20 66 aa3.12□□□□□ -1.91
SF1-217ENST00000486960 KRTAP7-1Q8IUC3 87 aa3.12□□□□□ -1.91
SF1-217ENST00000486960 TRGV2A0A075B6R0 118 aa3.11□□□□□ -1.91
SF1-217ENST00000486960 KRTAP10-1P60331 282 aa3.11□□□□□ -1.91
SF1-217ENST00000486960 KRTAP10-4P60372 401 aaPredicted RBP3.11□□□□□ -1.91
SF1-217ENST00000486960 SPATA8Q6RVD6 105 aa3.11□□□□□ -1.91
SF1-217ENST00000486960 OBSCN-AS1Q96MR7 158 aa3.11□□□□□ -1.91
SF1-217ENST00000486960 A0A087WTM6 91 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 A0A087WYN8 130 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 NBDYA0A0U1RRE5 68 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 SPART-AS1P0CW21 52 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 HTN3P15516 51 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 POLR2KP53803 58 aaKnown RBP3.1□□□□□ -1.91
SF1-217ENST00000486960 SMIM2Q9BVW6 85 aa3.1□□□□□ -1.91
SF1-217ENST00000486960 TRGV4A0A0C4DH28 118 aa3.09□□□□□ -1.91
SF1-217ENST00000486960 IGIPA6NJ69 53 aa3.09□□□□□ -1.91
SF1-217ENST00000486960 SPINK7P58062 85 aa3.09□□□□□ -1.91
SF1-217ENST00000486960 TPRXLQ17RH7 258 aa3.09□□□□□ -1.91
SF1-217ENST00000486960 A0A096LPF7 62 aa3.08□□□□□ -1.92
SF1-217ENST00000486960 IGKV2-29A2NJV5 120 aaPredicted RBP3.08□□□□□ -1.92
SF1-217ENST00000486960 SPACA4Q8TDM5 124 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms