RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 CASC2Q6XLA1 102 aa12.44□□□□□ -0.42
TRADD-202ENST00000486556 WFDC13Q8IUB5 93 aa12.44□□□□□ -0.42
TRADD-202ENST00000486556 KLKP1Q107X0 134 aa12.44□□□□□ -0.42
TRADD-202ENST00000486556 HSPG2P98160 4391 aa12.43□□□□□ -0.42
TRADD-202ENST00000486556 MMP24-AS1A0A0U1RRL7 71 aa12.42□□□□□ -0.42
TRADD-202ENST00000486556 C1orf195Q5TG92 126 aa12.42□□□□□ -0.42
TRADD-202ENST00000486556 IGHV6-1A0A0B4J1U7 121 aa12.4□□□□□ -0.42
TRADD-202ENST00000486556 C8orf17Q9NRJ1 99 aa12.4□□□□□ -0.42
TRADD-202ENST00000486556 RYR1P21817 5038 aa12.4□□□□□ -0.42
TRADD-202ENST00000486556 hDV103S1A0JD37 113 aa12.39□□□□□ -0.43
TRADD-202ENST00000486556 PKHD1L1Q86WI1 4243 aa12.38□□□□□ -0.43
TRADD-202ENST00000486556 H7BZZ5 65 aa12.37□□□□□ -0.43
TRADD-202ENST00000486556 Q8N1X5 172 aa12.34□□□□□ -0.43
TRADD-202ENST00000486556 SNURFQ9Y675 71 aa12.34□□□□□ -0.43
TRADD-202ENST00000486556 BIRC6Q9NR09 4857 aa12.34□□□□□ -0.43
TRADD-202ENST00000486556 C8orf87E5RJ46 101 aa12.32□□□□□ -0.44
TRADD-202ENST00000486556 NDUFC1O43677 76 aa12.32□□□□□ -0.44
TRADD-202ENST00000486556 TMEM254Q8TBM7 123 aa12.3□□□□□ -0.44
TRADD-202ENST00000486556 FAM236DA0A1B0GTK5 79 aa12.29□□□□□ -0.44
TRADD-202ENST00000486556 FAM236CP0DP71 79 aa12.29□□□□□ -0.44
TRADD-202ENST00000486556 C5orf47Q569G3 176 aa12.28□□□□□ -0.44
TRADD-202ENST00000486556 NOTCH2NLQ7Z3S9 236 aa12.28□□□□□ -0.44
TRADD-202ENST00000486556 MRPL34Q9BQ48 92 aaKnown RBP12.27□□□□□ -0.45
TRADD-202ENST00000486556 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
TRADD-202ENST00000486556 LINC00313P59037 77 aa12.25□□□□□ -0.45
TRADD-202ENST00000486556 KRTAP10-8P60410 259 aa12.25□□□□□ -0.45
TRADD-202ENST00000486556 A0A0U1RQV1 116 aa12.25□□□□□ -0.45
TRADD-202ENST00000486556 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
TRADD-202ENST00000486556 TP53AIP1Q9HCN2 124 aa12.24□□□□□ -0.45
TRADD-202ENST00000486556 OXTP01178 125 aa12.21□□□□□ -0.45
TRADD-202ENST00000486556 SERP1Q9Y6X1 66 aa12.18□□□□□ -0.46
TRADD-202ENST00000486556 MP68P56378 58 aa12.17□□□□□ -0.46
TRADD-202ENST00000486556 ATP5EP56381 51 aaPredicted RBP12.16□□□□□ -0.46
TRADD-202ENST00000486556 NDUFS5O43920 106 aa12.16□□□□□ -0.46
TRADD-202ENST00000486556 H3BPC8 53 aa12.13□□□□□ -0.47
TRADD-202ENST00000486556 TRAV22A0A0B4J277 110 aa12.11□□□□□ -0.47
TRADD-202ENST00000486556 H0Y9P7 68 aa12.11□□□□□ -0.47
TRADD-202ENST00000486556 Q8N9P0 234 aaPredicted RBP12.1□□□□□ -0.47
TRADD-202ENST00000486556 TNXBP22105 4242 aa12.09□□□□□ -0.47
TRADD-202ENST00000486556 ZCCHC13Q8WW36 166 aaKnown RBP12.09□□□□□ -0.47
TRADD-202ENST00000486556 LRP1Q07954 4544 aaKnown RBP12.08□□□□□ -0.47
TRADD-202ENST00000486556 KRTAP16-1A8MUX0 517 aa12.08□□□□□ -0.48
TRADD-202ENST00000486556 LINC00208Q96KT6 92 aa12.05□□□□□ -0.48
TRADD-202ENST00000486556 FAT3Q8TDW7 4589 aa12.05□□□□□ -0.48
TRADD-202ENST00000486556 SVIPQ8NHG7 77 aa12.04□□□□□ -0.48
TRADD-202ENST00000486556 FLG2Q5D862 2391 aaPredicted RBP12.02□□□□□ -0.49
TRADD-202ENST00000486556 MT1HL1P0DM35 61 aa12.01□□□□□ -0.49
TRADD-202ENST00000486556 C1orf64Q8NEQ6 169 aa12.01□□□□□ -0.49
TRADD-202ENST00000486556 RETNLBQ9BQ08 111 aa12□□□□□ -0.49
TRADD-202ENST00000486556 HERC2O95714 4834 aa11.99□□□□□ -0.49
TRADD-202ENST00000486556 SMIM26A0A096LP01 95 aa11.96□□□□□ -0.49
TRADD-202ENST00000486556 Q5W150 140 aa11.95□□□□□ -0.5
TRADD-202ENST00000486556 FP248Q71RG6 208 aaPredicted RBP11.95□□□□□ -0.5
TRADD-202ENST00000486556 KRTAP13-3Q3SY46 172 aa11.94□□□□□ -0.5
TRADD-202ENST00000486556 KRTAP4-5Q9BYR2 181 aa11.93□□□□□ -0.5
TRADD-202ENST00000486556 C4orf26Q17RF5 130 aa11.91□□□□□ -0.5
TRADD-202ENST00000486556 LOC101927531A0A1B0GV80 90 aa11.88□□□□□ -0.51
TRADD-202ENST00000486556 C9orf92A6NGG3 77 aa11.88□□□□□ -0.51
TRADD-202ENST00000486556 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
TRADD-202ENST00000486556 C20orf166-AS1Q96NR2 134 aa11.85□□□□□ -0.51
TRADD-202ENST00000486556 DMBT1Q9UGM3 2413 aaPredicted RBP11.84□□□□□ -0.51
TRADD-202ENST00000486556 A8MUU9 505 aa11.83□□□□□ -0.51
TRADD-202ENST00000486556 CYP4F30PQ9H0H9 118 aa11.83□□□□□ -0.52
TRADD-202ENST00000486556 SPANXA2-OT1Q8N9U9 137 aa11.8□□□□□ -0.52
TRADD-202ENST00000486556 IGLV7-46A0A075B6I9 117 aa11.79□□□□□ -0.52
TRADD-202ENST00000486556 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
TRADD-202ENST00000486556 IGKV2-30P06310 120 aa11.74□□□□□ -0.53
TRADD-202ENST00000486556 Q75L30 129 aa11.74□□□□□ -0.53
TRADD-202ENST00000486556 PCLOQ9Y6V0 5065 aa11.71□□□□□ -0.54
TRADD-202ENST00000486556 PRR4Q16378 134 aa11.68□□□□□ -0.54
TRADD-202ENST00000486556 ABCA13Q86UQ4 5058 aa11.68□□□□□ -0.54
TRADD-202ENST00000486556 IGKV2D-30A0A075B6S6 120 aa11.63□□□□□ -0.55
TRADD-202ENST00000486556 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
TRADD-202ENST00000486556 J3QL48 77 aa11.63□□□□□ -0.55
TRADD-202ENST00000486556 C7orf65Q6ZTY9 151 aa11.61□□□□□ -0.55
TRADD-202ENST00000486556 XP32Q5T750 250 aa11.6□□□□□ -0.55
TRADD-202ENST00000486556 HRES1P13985 223 aa11.58□□□□□ -0.56
TRADD-202ENST00000486556 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
TRADD-202ENST00000486556 Q1T7F1 81 aa11.58□□□□□ -0.56
TRADD-202ENST00000486556 RPL37P61927 97 aaKnown RBP11.58□□□□□ -0.56
TRADD-202ENST00000486556 ATP11AUNQ6ZP68 121 aa11.57□□□□□ -0.56
TRADD-202ENST00000486556 SPINK7P58062 85 aa11.47□□□□□ -0.57
TRADD-202ENST00000486556 V9GYY9 64 aa11.46□□□□□ -0.58
TRADD-202ENST00000486556 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
TRADD-202ENST00000486556 ACYP2P14621 99 aa11.43□□□□□ -0.58
TRADD-202ENST00000486556 PRO0628Q9UI54 55 aa11.43□□□□□ -0.58
TRADD-202ENST00000486556 COA5Q86WW8 74 aa11.42□□□□□ -0.58
TRADD-202ENST00000486556 PSPHP1O15172 72 aa11.33□□□□□ -0.6
TRADD-202ENST00000486556 BRK1Q8WUW1 75 aa11.33□□□□□ -0.6
TRADD-202ENST00000486556 A8MUN3 132 aa11.32□□□□□ -0.6
TRADD-202ENST00000486556 Q5VV11 94 aa11.24□□□□□ -0.61
TRADD-202ENST00000486556 LPAP08519 4548 aa11.23□□□□□ -0.61
TRADD-202ENST00000486556 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
TRADD-202ENST00000486556 COX6B2Q6YFQ2 88 aa11.21□□□□□ -0.61
TRADD-202ENST00000486556 LRP2P98164 4655 aa11.21□□□□□ -0.61
TRADD-202ENST00000486556 SEC61BP60468 96 aaKnown RBP11.19□□□□□ -0.62
TRADD-202ENST00000486556 PRR15LQ9BU68 103 aa11.19□□□□□ -0.62
TRADD-202ENST00000486556 KRTAP3-1Q9BYR8 98 aa11.19□□□□□ -0.62
TRADD-202ENST00000486556 HERC1Q15751 4861 aa11.18□□□□□ -0.62
TRADD-202ENST00000486556 LINC01558Q9Y6Z2 57 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms