RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 A0A087X002 238 aa8.01□□□□□ -1.13
PKD1-219ENST00000486339 FBN1P35555 2871 aaKnown RBP8□□□□□ -1.13
PKD1-219ENST00000486339 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
PKD1-219ENST00000486339 UQCR11O14957 56 aa7.99□□□□□ -1.13
PKD1-219ENST00000486339 HRES1P13985 223 aa7.97□□□□□ -1.13
PKD1-219ENST00000486339 TENM2Q9NT68 2774 aa7.97□□□□□ -1.13
PKD1-219ENST00000486339 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
PKD1-219ENST00000486339 VWFP04275 2813 aa7.95□□□□□ -1.14
PKD1-219ENST00000486339 SMG1Q96Q15 3661 aaKnown RBP7.94□□□□□ -1.14
PKD1-219ENST00000486339 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
PKD1-219ENST00000486339 Q5W150 140 aa7.92□□□□□ -1.14
PKD1-219ENST00000486339 LCA10Q71F78 164 aa7.9□□□□□ -1.14
PKD1-219ENST00000486339 CSMD1Q96PZ7 3565 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 NBPF19A0A087WUL8 3843 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 ZFHX3Q15911 3703 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 SPINK7P58062 85 aa7.89□□□□□ -1.15
PKD1-219ENST00000486339 TGP01266 2768 aa7.86□□□□□ -1.15
PKD1-219ENST00000486339 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
PKD1-219ENST00000486339 Q75L30 129 aa7.83□□□□□ -1.16
PKD1-219ENST00000486339 KRTAP29-1A8MX34 341 aaPredicted RBP7.82□□□□□ -1.16
PKD1-219ENST00000486339 SVEP1Q4LDE5 3571 aa7.81□□□□□ -1.16
PKD1-219ENST00000486339 KRTAP13-2Q52LG2 175 aa7.81□□□□□ -1.16
PKD1-219ENST00000486339 Q5VV11 94 aa7.81□□□□□ -1.16
PKD1-219ENST00000486339 LINC01554Q52M75 96 aa7.8□□□□□ -1.16
PKD1-219ENST00000486339 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
PKD1-219ENST00000486339 NOTCH2NLQ7Z3S9 236 aa7.78□□□□□ -1.16
PKD1-219ENST00000486339 CUBNO60494 3623 aa7.78□□□□□ -1.16
PKD1-219ENST00000486339 RPS29P62273 56 aaKnown RBP7.76□□□□□ -1.17
PKD1-219ENST00000486339 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
PKD1-219ENST00000486339 A0A0D9SG42 100 aa7.75□□□□□ -1.17
PKD1-219ENST00000486339 M0R2T5 61 aa7.75□□□□□ -1.17
PKD1-219ENST00000486339 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
PKD1-219ENST00000486339 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
PKD1-219ENST00000486339 S4R3F8 94 aa7.7□□□□□ -1.18
PKD1-219ENST00000486339 A0A1B0GU33 70 aa7.69□□□□□ -1.18
PKD1-219ENST00000486339 CSMD2Q7Z408 3487 aa7.69□□□□□ -1.18
PKD1-219ENST00000486339 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
PKD1-219ENST00000486339 DMAC1Q96GE9 116 aa7.65□□□□□ -1.18
PKD1-219ENST00000486339 PRAC1Q96KF2 57 aa7.64□□□□□ -1.19
PKD1-219ENST00000486339 CRIPTQ9P021 101 aa7.61□□□□□ -1.19
PKD1-219ENST00000486339 H3BS24 57 aa7.61□□□□□ -1.19
PKD1-219ENST00000486339 KRTAP1-4P0C5Y4 121 aa7.58□□□□□ -1.2
PKD1-219ENST00000486339 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
PKD1-219ENST00000486339 SRRM2Q9UQ35 2752 aaKnown RBP7.55□□□□□ -1.2
PKD1-219ENST00000486339 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
PKD1-219ENST00000486339 ANK3Q12955 4377 aaKnown RBP7.53□□□□□ -1.2
PKD1-219ENST00000486339 R4GN34 69 aa7.53□□□□□ -1.2
PKD1-219ENST00000486339 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
PKD1-219ENST00000486339 A8MU10 97 aa7.46□□□□□ -1.21
PKD1-219ENST00000486339 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
PKD1-219ENST00000486339 A8MUU9 505 aa7.43□□□□□ -1.22
PKD1-219ENST00000486339 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
PKD1-219ENST00000486339 C20orf166-AS1Q96NR2 134 aa7.41□□□□□ -1.22
PKD1-219ENST00000486339 FBN3Q75N90 2809 aa7.4□□□□□ -1.22
PKD1-219ENST00000486339 A6NN06 94 aa7.4□□□□□ -1.23
PKD1-219ENST00000486339 M0QZ58 72 aa7.39□□□□□ -1.23
PKD1-219ENST00000486339 A0A1B0GVY2 172 aa7.38□□□□□ -1.23
PKD1-219ENST00000486339 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
PKD1-219ENST00000486339 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
PKD1-219ENST00000486339 XP32Q5T750 250 aa7.31□□□□□ -1.24
PKD1-219ENST00000486339 MEGF8Q7Z7M0 2845 aa7.27□□□□□ -1.25
PKD1-219ENST00000486339 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
PKD1-219ENST00000486339 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
PKD1-219ENST00000486339 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
PKD1-219ENST00000486339 VPS13CQ709C8 3753 aa7.22□□□□□ -1.25
PKD1-219ENST00000486339 KRTAP10-8P60410 259 aa7.21□□□□□ -1.26
PKD1-219ENST00000486339 KRTAP16-1A8MUX0 517 aa7.2□□□□□ -1.26
PKD1-219ENST00000486339 KRTAP13-3Q3SY46 172 aa7.17□□□□□ -1.26
PKD1-219ENST00000486339 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
PKD1-219ENST00000486339 ROMO1P60602 79 aa7.15□□□□□ -1.27
PKD1-219ENST00000486339 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
PKD1-219ENST00000486339 ZNF469Q96JG9 3925 aaPredicted RBP7.03□□□□□ -1.28
PKD1-219ENST00000486339 HUWE1Q7Z6Z7 4374 aaKnown RBP6.94□□□□□ -1.3
PKD1-219ENST00000486339 A0A0A0MQY5 61 aa6.86□□□□□ -1.31
PKD1-219ENST00000486339 AKAP9Q99996 3911 aa6.85□□□□□ -1.31
PKD1-219ENST00000486339 NDUFAF8A1L188 74 aa6.81□□□□□ -1.32
PKD1-219ENST00000486339 P0C880 135 aa6.79□□□□□ -1.32
PKD1-219ENST00000486339 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
PKD1-219ENST00000486339 DNHD1Q96M86 4753 aa6.78□□□□□ -1.32
PKD1-219ENST00000486339 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
PKD1-219ENST00000486339 H0YAA0 97 aa6.77□□□□□ -1.33
PKD1-219ENST00000486339 TNP1P09430 55 aa6.77□□□□□ -1.33
PKD1-219ENST00000486339 DNAH9Q9NYC9 4486 aa6.76□□□□□ -1.33
PKD1-219ENST00000486339 KRTAP10-4P60372 401 aaPredicted RBP6.74□□□□□ -1.33
PKD1-219ENST00000486339 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
PKD1-219ENST00000486339 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
PKD1-219ENST00000486339 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
PKD1-219ENST00000486339 CSMD3Q7Z407 3707 aa6.62□□□□□ -1.35
PKD1-219ENST00000486339 PLECQ15149 4684 aaKnown RBP6.56□□□□□ -1.36
PKD1-219ENST00000486339 DNAH5Q8TE73 4624 aa6.55□□□□□ -1.36
PKD1-219ENST00000486339 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
PKD1-219ENST00000486339 ALMS1Q8TCU4 4167 aa6.52□□□□□ -1.37
PKD1-219ENST00000486339 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
PKD1-219ENST00000486339 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.37
PKD1-219ENST00000486339 DNAH1Q9P2D7 4330 aa6.46□□□□□ -1.38
PKD1-219ENST00000486339 VPS13DQ5THJ4 4388 aa6.41□□□□□ -1.38
PKD1-219ENST00000486339 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
PKD1-219ENST00000486339 PRKDCP78527 4128 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms