RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 APC2O95996 2303 aa1.28□□□□□ -2.2
PHC3-211ENST00000486042 ACACAQ13085 2346 aa1.28□□□□□ -2.2
PHC3-211ENST00000486042 NF1P21359 2839 aa1.28□□□□□ -2.2
PHC3-211ENST00000486042 BOD1L1Q8NFC6 3051 aa1.28□□□□□ -2.2
PHC3-211ENST00000486042 NBPF19A0A087WUL8 3843 aa1.27□□□□□ -2.21
PHC3-211ENST00000486042 IGLV5-48A0A075B6I7 105 aa1.27□□□□□ -2.21
PHC3-211ENST00000486042 TFF3Q07654 80 aa1.27□□□□□ -2.21
PHC3-211ENST00000486042 Q5VSD8 79 aa1.27□□□□□ -2.21
PHC3-211ENST00000486042 ITPR2Q14571 2701 aa1.27□□□□□ -2.21
PHC3-211ENST00000486042 TLN1Q9Y490 2541 aaKnown RBP1.27□□□□□ -2.21
PHC3-211ENST00000486042 CELSR1Q9NYQ6 3014 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 CELSR2Q9HCU4 2923 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 PDZD2O15018 2839 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 Q6ZSA8 131 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 Q9Y3F1 56 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 CSMD1Q96PZ7 3565 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 TENM1Q9UKZ4 2725 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 LRRK2Q5S007 2527 aa1.26□□□□□ -2.21
PHC3-211ENST00000486042 NBEAL1Q6ZS30 2694 aa1.25□□□□□ -2.21
PHC3-211ENST00000486042 SPG11Q96JI7 2443 aa1.25□□□□□ -2.21
PHC3-211ENST00000486042 MAP1AP78559 2803 aaPredicted RBP1.25□□□□□ -2.21
PHC3-211ENST00000486042 C10orf95Q9H7T3 257 aa1.25□□□□□ -2.21
PHC3-211ENST00000486042 SPENQ96T58 3664 aaKnown RBP1.25□□□□□ -2.21
PHC3-211ENST00000486042 MTORP42345 2549 aa1.25□□□□□ -2.21
PHC3-211ENST00000486042 NBASA2RRP1 2371 aa1.25□□□□□ -2.21
PHC3-211ENST00000486042 SPTBN1Q01082 2364 aaKnown RBP1.25□□□□□ -2.21
PHC3-211ENST00000486042 ADGRG4Q8IZF6 3080 aa1.24□□□□□ -2.21
PHC3-211ENST00000486042 USP9YO00507 2555 aaPredicted RBP1.24□□□□□ -2.21
PHC3-211ENST00000486042 PRRC2CQ9Y520 2896 aaKnown RBP1.24□□□□□ -2.21
PHC3-211ENST00000486042 RP1L1Q8IWN7 2480 aaPredicted RBP1.24□□□□□ -2.21
PHC3-211ENST00000486042 NIPBLQ6KC79 2804 aaeCLIP1.24□□□□□ -2.21
PHC3-211ENST00000486042 F8P00451 2351 aa1.24□□□□□ -2.21
PHC3-211ENST00000486042 POLR2KP53803 58 aaKnown RBP1.24□□□□□ -2.21
PHC3-211ENST00000486042 SMR3AQ99954 134 aa1.24□□□□□ -2.21
PHC3-211ENST00000486042 C6orf48Q9UBA6 75 aa1.24□□□□□ -2.21
PHC3-211ENST00000486042 ABCA2Q9BZC7 2435 aa1.24□□□□□ -2.21
PHC3-211ENST00000486042 TACC2O95359 2948 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 MEGF8Q7Z7M0 2845 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 RPS27P42677 84 aaKnown RBP1.23□□□□□ -2.21
PHC3-211ENST00000486042 DEFB109BQ30KR1 87 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 MINOS1Q5TGZ0 78 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 RPS27LQ71UM5 84 aaKnown RBP1.23□□□□□ -2.21
PHC3-211ENST00000486042 OTOGQ6ZRI0 2925 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 HIVEP1P15822 2718 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 CSMD2Q7Z408 3487 aa1.23□□□□□ -2.21
PHC3-211ENST00000486042 KNL1Q8NG31 2342 aa1.22□□□□□ -2.21
PHC3-211ENST00000486042 KRTAP21-3Q3LHN1 58 aa1.22□□□□□ -2.21
PHC3-211ENST00000486042 PCNX1Q96RV3 2341 aa1.22□□□□□ -2.21
PHC3-211ENST00000486042 ANKHD1Q8IWZ3 2542 aaKnown RBP1.22□□□□□ -2.21
PHC3-211ENST00000486042 TGP01266 2768 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 DEFB133Q30KQ1 61 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 LINC01590Q5TEZ4 76 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 ARHGAP5-AS1Q96IT6 56 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 APCP25054 2843 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 ATRQ13535 2644 aa1.21□□□□□ -2.22
PHC3-211ENST00000486042 IAPPP10997 89 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 SPRR1AP35321 89 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 H1FX-AS1Q4G0G2 97 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 NBEAL2Q6ZNJ1 2754 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 DCHS2Q6V1P9 2916 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 PLCE1Q9P212 2302 aa1.2□□□□□ -2.22
PHC3-211ENST00000486042 STAB1Q9NY15 2570 aa1.19□□□□□ -2.22
PHC3-211ENST00000486042 ACANP16112 2415 aa1.19□□□□□ -2.22
PHC3-211ENST00000486042 WNK2Q9Y3S1 2297 aa1.19□□□□□ -2.22
PHC3-211ENST00000486042 PKDREJQ9NTG1 2253 aa1.18□□□□□ -2.22
PHC3-211ENST00000486042 FLNAP21333 2647 aaKnown RBP1.18□□□□□ -2.22
PHC3-211ENST00000486042 DEFB131AP59861 70 aa1.18□□□□□ -2.22
PHC3-211ENST00000486042 PRB3Q04118 309 aaPredicted RBP1.18□□□□□ -2.22
PHC3-211ENST00000486042 ROS1P08922 2347 aa1.18□□□□□ -2.22
PHC3-211ENST00000486042 DNHD1Q96M86 4753 aa1.18□□□□□ -2.22
PHC3-211ENST00000486042 HIVEP3Q5T1R4 2406 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 COL6A5A8TX70 2615 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 DEFB130BP0DP73 79 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 DEFB130AP0DP74 79 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 SPINK9Q5DT21 86 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 LELP1Q5T871 98 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 AKAP9Q99996 3911 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 PKD1L1Q8TDX9 2849 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 TLN2Q9Y4G6 2542 aa1.17□□□□□ -2.22
PHC3-211ENST00000486042 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
PHC3-211ENST00000486042 NOTCH1P46531 2555 aa1.16□□□□□ -2.22
PHC3-211ENST00000486042 AKAP6Q13023 2319 aa1.16□□□□□ -2.22
PHC3-211ENST00000486042 WT1-ASQ06250 92 aa1.16□□□□□ -2.22
PHC3-211ENST00000486042 USF3Q68DE3 2245 aa1.16□□□□□ -2.22
PHC3-211ENST00000486042 BSNQ9UPA5 3926 aa1.15□□□□□ -2.22
PHC3-211ENST00000486042 HRNRQ86YZ3 2850 aaPredicted RBP1.15□□□□□ -2.22
PHC3-211ENST00000486042 CSPG4Q6UVK1 2322 aa1.15□□□□□ -2.23
PHC3-211ENST00000486042 CUBNO60494 3623 aa1.15□□□□□ -2.23
PHC3-211ENST00000486042 MMP24-AS1A0A0U1RRL7 71 aa1.15□□□□□ -2.23
PHC3-211ENST00000486042 PRO0255Q9UI72 69 aa1.15□□□□□ -2.23
PHC3-211ENST00000486042 U3KQA8 63 aa1.15□□□□□ -2.23
PHC3-211ENST00000486042 H3BUA1 57 aa1.14□□□□□ -2.23
PHC3-211ENST00000486042 WFDC13Q8IUB5 93 aa1.14□□□□□ -2.23
PHC3-211ENST00000486042 VPS13CQ709C8 3753 aa1.14□□□□□ -2.23
PHC3-211ENST00000486042 NSD1Q96L73 2696 aaPredicted RBP1.13□□□□□ -2.23
PHC3-211ENST00000486042 AHNAK2Q8IVF2 5795 aa1.13□□□□□ -2.23
PHC3-211ENST00000486042 MGAM2Q2M2H8 2515 aa1.13□□□□□ -2.23
PHC3-211ENST00000486042 RPL39P62891 51 aaKnown RBP1.13□□□□□ -2.23
PHC3-211ENST00000486042 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms