RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 FP248Q71RG6 208 aaPredicted RBP7.08□□□□□ -1.28
HMG20B-211ENST00000486028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
HMG20B-211ENST00000486028 LOC110117498A0A087WWA1 95 aa7.06□□□□□ -1.28
HMG20B-211ENST00000486028 F8WEM9 126 aa7.05□□□□□ -1.28
HMG20B-211ENST00000486028 HRCT1Q6UXD1 115 aa7.05□□□□□ -1.28
HMG20B-211ENST00000486028 A0A087WVE0 104 aa7.04□□□□□ -1.28
HMG20B-211ENST00000486028 CD164Q04900 197 aa7.04□□□□□ -1.28
HMG20B-211ENST00000486028 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
HMG20B-211ENST00000486028 UBL5Q9BZL1 73 aa7.04□□□□□ -1.28
HMG20B-211ENST00000486028 PDE6GP18545 87 aa7.03□□□□□ -1.28
HMG20B-211ENST00000486028 LIMD2Q9BT23 127 aa7.03□□□□□ -1.28
HMG20B-211ENST00000486028 Q6ZQT0 140 aa7.02□□□□□ -1.29
HMG20B-211ENST00000486028 RNF213Q63HN8 5207 aa7.02□□□□□ -1.29
HMG20B-211ENST00000486028 RBM3P98179 157 aaKnown RBP7.01□□□□□ -1.29
HMG20B-211ENST00000486028 CYSTM1Q9H1C7 97 aa7.01□□□□□ -1.29
HMG20B-211ENST00000486028 TRAV7A0A075B6U4 112 aa6.99□□□□□ -1.29
HMG20B-211ENST00000486028 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
HMG20B-211ENST00000486028 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
HMG20B-211ENST00000486028 C5orf47Q569G3 176 aa6.98□□□□□ -1.29
HMG20B-211ENST00000486028 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
HMG20B-211ENST00000486028 Q5XG85 94 aa6.97□□□□□ -1.29
HMG20B-211ENST00000486028 CXCL6P80162 114 aa6.96□□□□□ -1.3
HMG20B-211ENST00000486028 Q6ZVQ6 151 aa6.95□□□□□ -1.3
HMG20B-211ENST00000486028 DSCR8Q96T75 97 aa6.95□□□□□ -1.3
HMG20B-211ENST00000486028 IGFL1Q6UW32 110 aa6.94□□□□□ -1.3
HMG20B-211ENST00000486028 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
HMG20B-211ENST00000486028 C1orf195Q5TG92 126 aa6.91□□□□□ -1.3
HMG20B-211ENST00000486028 FAM236DA0A1B0GTK5 79 aa6.9□□□□□ -1.3
HMG20B-211ENST00000486028 FAM236CP0DP71 79 aa6.9□□□□□ -1.3
HMG20B-211ENST00000486028 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
HMG20B-211ENST00000486028 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.3
HMG20B-211ENST00000486028 SEC61BP60468 96 aaKnown RBP6.89□□□□□ -1.31
HMG20B-211ENST00000486028 KLKP1Q107X0 134 aa6.89□□□□□ -1.31
HMG20B-211ENST00000486028 H7BZZ5 65 aa6.88□□□□□ -1.31
HMG20B-211ENST00000486028 NDUFC1O43677 76 aa6.87□□□□□ -1.31
HMG20B-211ENST00000486028 ASB16-AS1Q495Z4 193 aa6.87□□□□□ -1.31
HMG20B-211ENST00000486028 XP32Q5T750 250 aa6.85□□□□□ -1.31
HMG20B-211ENST00000486028 MUC2Q02817 5179 aa6.84□□□□□ -1.31
HMG20B-211ENST00000486028 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
HMG20B-211ENST00000486028 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
HMG20B-211ENST00000486028 C9orf92A6NGG3 77 aa6.83□□□□□ -1.32
HMG20B-211ENST00000486028 Q75L30 129 aa6.83□□□□□ -1.32
HMG20B-211ENST00000486028 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
HMG20B-211ENST00000486028 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
HMG20B-211ENST00000486028 NREPQ16612 68 aa6.81□□□□□ -1.32
HMG20B-211ENST00000486028 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
HMG20B-211ENST00000486028 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
HMG20B-211ENST00000486028 A0A1B0GW54 56 aa6.8□□□□□ -1.32
HMG20B-211ENST00000486028 A0A087WSZ3 146 aa6.79□□□□□ -1.32
HMG20B-211ENST00000486028 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
HMG20B-211ENST00000486028 BPY2O14599 106 aa6.78□□□□□ -1.32
HMG20B-211ENST00000486028 IGKV4-1P06312 121 aa6.78□□□□□ -1.32
HMG20B-211ENST00000486028 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
HMG20B-211ENST00000486028 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
HMG20B-211ENST00000486028 TMEM254Q8TBM7 123 aa6.75□□□□□ -1.33
HMG20B-211ENST00000486028 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
HMG20B-211ENST00000486028 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
HMG20B-211ENST00000486028 MPLKIPQ8TAP9 179 aa6.72□□□□□ -1.33
HMG20B-211ENST00000486028 RPL37P61927 97 aaKnown RBP6.7□□□□□ -1.34
HMG20B-211ENST00000486028 Q96NJ1 140 aa6.7□□□□□ -1.34
HMG20B-211ENST00000486028 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
HMG20B-211ENST00000486028 Q8N9L7 120 aa6.68□□□□□ -1.34
HMG20B-211ENST00000486028 PRO0628Q9UI54 55 aa6.67□□□□□ -1.34
HMG20B-211ENST00000486028 FAT4Q6V0I7 4981 aa6.66□□□□□ -1.34
HMG20B-211ENST00000486028 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
HMG20B-211ENST00000486028 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
HMG20B-211ENST00000486028 ATP11AUNQ6ZP68 121 aa6.63□□□□□ -1.35
HMG20B-211ENST00000486028 DSCR10P59022 87 aa6.62□□□□□ -1.35
HMG20B-211ENST00000486028 LINC00313P59037 77 aa6.62□□□□□ -1.35
HMG20B-211ENST00000486028 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
HMG20B-211ENST00000486028 C20orf166-AS1Q96NR2 134 aa6.6□□□□□ -1.35
HMG20B-211ENST00000486028 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
HMG20B-211ENST00000486028 hDV103S1A0JD37 113 aa6.58□□□□□ -1.36
HMG20B-211ENST00000486028 A8MUU9 505 aa6.58□□□□□ -1.36
HMG20B-211ENST00000486028 A0A1B0GVX0 72 aa6.56□□□□□ -1.36
HMG20B-211ENST00000486028 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
HMG20B-211ENST00000486028 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
HMG20B-211ENST00000486028 C8orf87E5RJ46 101 aa6.55□□□□□ -1.36
HMG20B-211ENST00000486028 K7EQZ3 153 aa6.55□□□□□ -1.36
HMG20B-211ENST00000486028 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
HMG20B-211ENST00000486028 NDUFB1O75438 58 aa6.54□□□□□ -1.36
HMG20B-211ENST00000486028 KRTAP16-1A8MUX0 517 aa6.53□□□□□ -1.36
HMG20B-211ENST00000486028 Q1T7F1 81 aa6.52□□□□□ -1.37
HMG20B-211ENST00000486028 A8MWP4 228 aa6.5□□□□□ -1.37
HMG20B-211ENST00000486028 H3BPC8 53 aa6.5□□□□□ -1.37
HMG20B-211ENST00000486028 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
HMG20B-211ENST00000486028 C1orf64Q8NEQ6 169 aa6.5□□□□□ -1.37
HMG20B-211ENST00000486028 BRK1Q8WUW1 75 aa6.49□□□□□ -1.37
HMG20B-211ENST00000486028 MP68P56378 58 aa6.48□□□□□ -1.37
HMG20B-211ENST00000486028 COX6B2Q6YFQ2 88 aa6.47□□□□□ -1.37
HMG20B-211ENST00000486028 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
HMG20B-211ENST00000486028 TRAV22A0A0B4J277 110 aa6.45□□□□□ -1.38
HMG20B-211ENST00000486028 PRR15Q8IV56 129 aa6.45□□□□□ -1.38
HMG20B-211ENST00000486028 SPANXA2-OT1Q8N9U9 137 aa6.45□□□□□ -1.38
HMG20B-211ENST00000486028 V9GYY9 64 aa6.45□□□□□ -1.38
HMG20B-211ENST00000486028 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
HMG20B-211ENST00000486028 MT1HP80294 61 aa6.42□□□□□ -1.38
HMG20B-211ENST00000486028 CASC2Q6XLA1 102 aa6.42□□□□□ -1.38
HMG20B-211ENST00000486028 H0Y9P7 68 aa6.41□□□□□ -1.38
HMG20B-211ENST00000486028 Q8N9P0 234 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms