RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ORMDL1Q9P0S3 153 aa3.7□□□□□ -1.82
VPS50-218ENST00000485994 A0A087WSZ3 146 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 A0A1W2PNM2 257 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 Q96NJ1 140 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
VPS50-218ENST00000485994 A8MUU9 505 aa3.68□□□□□ -1.82
VPS50-218ENST00000485994 MT1HP80294 61 aa3.68□□□□□ -1.82
VPS50-218ENST00000485994 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
VPS50-218ENST00000485994 ANKRD29Q8N6D5 301 aa3.68□□□□□ -1.82
VPS50-218ENST00000485994 OBSCN-AS1Q96MR7 158 aa3.68□□□□□ -1.82
VPS50-218ENST00000485994 A0A1W2PPM0 123 aa3.67□□□□□ -1.82
VPS50-218ENST00000485994 PCP4L1A6NKN8 68 aa3.67□□□□□ -1.82
VPS50-218ENST00000485994 BAALC-AS2P0C853 105 aa3.66□□□□□ -1.82
VPS50-218ENST00000485994 ATXN8Q156A1 80 aa3.66□□□□□ -1.82
VPS50-218ENST00000485994 C21orf62-AS1Q17RA5 79 aa3.66□□□□□ -1.82
VPS50-218ENST00000485994 LINC00472Q9H8W2 130 aa3.66□□□□□ -1.82
VPS50-218ENST00000485994 TRBV20-1A0A075B6N2 111 aa3.65□□□□□ -1.83
VPS50-218ENST00000485994 RBM3P98179 157 aaKnown RBP3.65□□□□□ -1.83
VPS50-218ENST00000485994 COL5A1-AS1Q5SY13 56 aa3.65□□□□□ -1.83
VPS50-218ENST00000485994 A0A1B0GW54 56 aa3.64□□□□□ -1.83
VPS50-218ENST00000485994 CCKP06307 115 aa3.64□□□□□ -1.83
VPS50-218ENST00000485994 LINC00313P59037 77 aa3.64□□□□□ -1.83
VPS50-218ENST00000485994 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
VPS50-218ENST00000485994 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
VPS50-218ENST00000485994 A0A1B0GV72 72 aa3.62□□□□□ -1.83
VPS50-218ENST00000485994 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
VPS50-218ENST00000485994 C9JAW5 83 aa3.62□□□□□ -1.83
VPS50-218ENST00000485994 IGKV4-1P06312 121 aa3.62□□□□□ -1.83
VPS50-218ENST00000485994 DSCR8Q96T75 97 aa3.62□□□□□ -1.83
VPS50-218ENST00000485994 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
VPS50-218ENST00000485994 KRTAP10-6P60371 365 aaPredicted RBP3.61□□□□□ -1.83
VPS50-218ENST00000485994 COX6B2Q6YFQ2 88 aa3.61□□□□□ -1.83
VPS50-218ENST00000485994 MTURNQ8N3F0 131 aa3.61□□□□□ -1.83
VPS50-218ENST00000485994 PRO0461Q9UI25 63 aa3.61□□□□□ -1.83
VPS50-218ENST00000485994 SPCS1Q9Y6A9 102 aa3.61□□□□□ -1.83
VPS50-218ENST00000485994 H3BT86 120 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 J3KT08 172 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 K7EP34 96 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 PDE6GP18545 87 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 DSCR10P59022 87 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 Q6ZQT0 140 aa3.6□□□□□ -1.83
VPS50-218ENST00000485994 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
VPS50-218ENST00000485994 C8orf87E5RJ46 101 aa3.59□□□□□ -1.83
VPS50-218ENST00000485994 SIGMAR1Q99720 223 aa3.59□□□□□ -1.83
VPS50-218ENST00000485994 A0A1B0GVX0 72 aa3.58□□□□□ -1.84
VPS50-218ENST00000485994 M0R2T5 61 aa3.58□□□□□ -1.84
VPS50-218ENST00000485994 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
VPS50-218ENST00000485994 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
VPS50-218ENST00000485994 MPLKIPQ8TAP9 179 aa3.57□□□□□ -1.84
VPS50-218ENST00000485994 C14orf132Q9NPU4 83 aa3.57□□□□□ -1.84
VPS50-218ENST00000485994 IGHV6-1A0A0B4J1U7 121 aa3.56□□□□□ -1.84
VPS50-218ENST00000485994 VPS25Q9BRG1 176 aa3.56□□□□□ -1.84
VPS50-218ENST00000485994 NDUFB1O75438 58 aa3.55□□□□□ -1.84
VPS50-218ENST00000485994 Q8N9P0 234 aaPredicted RBP3.55□□□□□ -1.84
VPS50-218ENST00000485994 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
VPS50-218ENST00000485994 A8MWP4 228 aa3.53□□□□□ -1.84
VPS50-218ENST00000485994 HRES1P13985 223 aa3.53□□□□□ -1.84
VPS50-218ENST00000485994 GTF2H5Q6ZYL4 71 aa3.53□□□□□ -1.84
VPS50-218ENST00000485994 F8W1H4 67 aa3.52□□□□□ -1.85
VPS50-218ENST00000485994 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
VPS50-218ENST00000485994 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
VPS50-218ENST00000485994 RBM12B-AS1Q9P1G2 102 aa3.52□□□□□ -1.85
VPS50-218ENST00000485994 A0A1B0GV90 55 aa3.51□□□□□ -1.85
VPS50-218ENST00000485994 NREPQ16612 68 aa3.51□□□□□ -1.85
VPS50-218ENST00000485994 PRR15Q8IV56 129 aa3.51□□□□□ -1.85
VPS50-218ENST00000485994 C8orf17Q9NRJ1 99 aa3.51□□□□□ -1.85
VPS50-218ENST00000485994 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
VPS50-218ENST00000485994 IGKV3D-7A0A0C4DH55 119 aa3.5□□□□□ -1.85
VPS50-218ENST00000485994 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
VPS50-218ENST00000485994 ETDBQ3ZM63 59 aa3.49□□□□□ -1.85
VPS50-218ENST00000485994 Q6ZVQ6 151 aa3.49□□□□□ -1.85
VPS50-218ENST00000485994 SPINK7P58062 85 aa3.48□□□□□ -1.85
VPS50-218ENST00000485994 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
VPS50-218ENST00000485994 FAM236DA0A1B0GTK5 79 aa3.47□□□□□ -1.85
VPS50-218ENST00000485994 FAM236CP0DP71 79 aa3.47□□□□□ -1.85
VPS50-218ENST00000485994 TMEM254Q8TBM7 123 aa3.46□□□□□ -1.86
VPS50-218ENST00000485994 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.86
VPS50-218ENST00000485994 MMP24-AS1A0A0U1RRL7 71 aa3.45□□□□□ -1.86
VPS50-218ENST00000485994 hDV103S1A0JD37 113 aa3.44□□□□□ -1.86
VPS50-218ENST00000485994 WFDC13Q8IUB5 93 aa3.44□□□□□ -1.86
VPS50-218ENST00000485994 USH2AO75445 5202 aa3.43□□□□□ -1.86
VPS50-218ENST00000485994 K7EQZ3 153 aa3.43□□□□□ -1.86
VPS50-218ENST00000485994 BPY2O14599 106 aa3.43□□□□□ -1.86
VPS50-218ENST00000485994 MT2AP02795 61 aa3.43□□□□□ -1.86
VPS50-218ENST00000485994 Q8N9L7 120 aa3.41□□□□□ -1.86
VPS50-218ENST00000485994 UBL5Q9BZL1 73 aa3.4□□□□□ -1.87
VPS50-218ENST00000485994 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
VPS50-218ENST00000485994 FAM240AA0A1B0GVK7 77 aa3.39□□□□□ -1.87
VPS50-218ENST00000485994 MT1FP04733 61 aa3.39□□□□□ -1.87
VPS50-218ENST00000485994 ACYP1P07311 99 aa3.38□□□□□ -1.87
VPS50-218ENST00000485994 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
VPS50-218ENST00000485994 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
VPS50-218ENST00000485994 Q5W150 140 aa3.38□□□□□ -1.87
VPS50-218ENST00000485994 NDUFS5O43920 106 aa3.37□□□□□ -1.87
VPS50-218ENST00000485994 CXCL6P80162 114 aa3.37□□□□□ -1.87
VPS50-218ENST00000485994 CASC2Q6XLA1 102 aa3.37□□□□□ -1.87
VPS50-218ENST00000485994 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
VPS50-218ENST00000485994 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms