RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
MRPL28-210ENST00000483764 A0A087X002 238 aa10.12□□□□□ -0.79
MRPL28-210ENST00000483764 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
MRPL28-210ENST00000483764 MOBPQ13875 183 aa10.12□□□□□ -0.79
MRPL28-210ENST00000483764 MP68P56378 58 aa10.11□□□□□ -0.79
MRPL28-210ENST00000483764 CASC2Q6XLA1 102 aa10.11□□□□□ -0.79
MRPL28-210ENST00000483764 PCLOQ9Y6V0 5065 aa10.11□□□□□ -0.79
MRPL28-210ENST00000483764 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
MRPL28-210ENST00000483764 CD164Q04900 197 aa10.09□□□□□ -0.79
MRPL28-210ENST00000483764 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
MRPL28-210ENST00000483764 ZCCHC13Q8WW36 166 aaKnown RBP10.09□□□□□ -0.79
MRPL28-210ENST00000483764 SSBP3-AS1Q7Z2R9 100 aa10.07□□□□□ -0.8
MRPL28-210ENST00000483764 DEFB116Q30KQ4 102 aa10.07□□□□□ -0.8
MRPL28-210ENST00000483764 WFDC13Q8IUB5 93 aa10.06□□□□□ -0.8
MRPL28-210ENST00000483764 PRR26Q8N8Z3 221 aa10.06□□□□□ -0.8
MRPL28-210ENST00000483764 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
MRPL28-210ENST00000483764 TYMSOSQ8TAI1 123 aa10.03□□□□□ -0.8
MRPL28-210ENST00000483764 SMIM26A0A096LP01 95 aa10.02□□□□□ -0.8
MRPL28-210ENST00000483764 Q96NJ1 140 aa10.02□□□□□ -0.81
MRPL28-210ENST00000483764 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
MRPL28-210ENST00000483764 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
MRPL28-210ENST00000483764 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
MRPL28-210ENST00000483764 ASB16-AS1Q495Z4 193 aa10□□□□□ -0.81
MRPL28-210ENST00000483764 OXTP01178 125 aa9.98□□□□□ -0.81
MRPL28-210ENST00000483764 A0A1B0GVX0 72 aa9.97□□□□□ -0.81
MRPL28-210ENST00000483764 HRCT1Q6UXD1 115 aa9.97□□□□□ -0.81
MRPL28-210ENST00000483764 CYP4F30PQ9H0H9 118 aa9.96□□□□□ -0.82
MRPL28-210ENST00000483764 H0Y9P7 68 aa9.95□□□□□ -0.82
MRPL28-210ENST00000483764 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
MRPL28-210ENST00000483764 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
MRPL28-210ENST00000483764 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
MRPL28-210ENST00000483764 KRTAP10-8P60410 259 aa9.92□□□□□ -0.82
MRPL28-210ENST00000483764 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
MRPL28-210ENST00000483764 LRP1Q07954 4544 aaKnown RBP9.92□□□□□ -0.82
MRPL28-210ENST00000483764 Q5XG85 94 aa9.92□□□□□ -0.82
MRPL28-210ENST00000483764 FLG2Q5D862 2391 aaPredicted RBP9.91□□□□□ -0.82
MRPL28-210ENST00000483764 LINC00304Q8N9R0 145 aa9.91□□□□□ -0.82
MRPL28-210ENST00000483764 LINC00208Q96KT6 92 aa9.9□□□□□ -0.82
MRPL28-210ENST00000483764 FAT3Q8TDW7 4589 aa9.9□□□□□ -0.83
MRPL28-210ENST00000483764 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
MRPL28-210ENST00000483764 SPAG11AQ6PDA7 123 aa9.89□□□□□ -0.83
MRPL28-210ENST00000483764 ABCA13Q86UQ4 5058 aa9.88□□□□□ -0.83
MRPL28-210ENST00000483764 SPINK1P00995 79 aa9.87□□□□□ -0.83
MRPL28-210ENST00000483764 C1orf64Q8NEQ6 169 aa9.87□□□□□ -0.83
MRPL28-210ENST00000483764 MRPL34Q9BQ48 92 aaKnown RBP9.87□□□□□ -0.83
MRPL28-210ENST00000483764 MYCBP2O75592 4640 aa9.86□□□□□ -0.83
MRPL28-210ENST00000483764 IGHV6-1A0A0B4J1U7 121 aa9.85□□□□□ -0.83
MRPL28-210ENST00000483764 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
MRPL28-210ENST00000483764 TNXBP22105 4242 aa9.82□□□□□ -0.84
MRPL28-210ENST00000483764 RPS29P62273 56 aaKnown RBP9.82□□□□□ -0.84
MRPL28-210ENST00000483764 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
MRPL28-210ENST00000483764 FP248Q71RG6 208 aaPredicted RBP9.78□□□□□ -0.84
MRPL28-210ENST00000483764 NDUFS5O43920 106 aa9.76□□□□□ -0.85
MRPL28-210ENST00000483764 C4orf26Q17RF5 130 aa9.75□□□□□ -0.85
MRPL28-210ENST00000483764 IGLV7-46A0A075B6I9 117 aa9.74□□□□□ -0.85
MRPL28-210ENST00000483764 V9GYY9 64 aa9.74□□□□□ -0.85
MRPL28-210ENST00000483764 LOC101927531A0A1B0GV80 90 aa9.73□□□□□ -0.85
MRPL28-210ENST00000483764 C1orf195Q5TG92 126 aa9.72□□□□□ -0.85
MRPL28-210ENST00000483764 Q1T7F1 81 aa9.71□□□□□ -0.86
MRPL28-210ENST00000483764 J3QL48 77 aa9.69□□□□□ -0.86
MRPL28-210ENST00000483764 LINC00313P59037 77 aa9.69□□□□□ -0.86
MRPL28-210ENST00000483764 DMBT1Q9UGM3 2413 aaPredicted RBP9.68□□□□□ -0.86
MRPL28-210ENST00000483764 Q8N9P0 234 aaPredicted RBP9.64□□□□□ -0.87
MRPL28-210ENST00000483764 NOTCH2NLQ7Z3S9 236 aa9.63□□□□□ -0.87
MRPL28-210ENST00000483764 RETNLBQ9BQ08 111 aa9.63□□□□□ -0.87
MRPL28-210ENST00000483764 PRR4Q16378 134 aa9.61□□□□□ -0.87
MRPL28-210ENST00000483764 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
MRPL28-210ENST00000483764 MPLKIPQ8TAP9 179 aa9.6□□□□□ -0.87
MRPL28-210ENST00000483764 PCOTHQ58A44 107 aa9.56□□□□□ -0.88
MRPL28-210ENST00000483764 COA5Q86WW8 74 aa9.54□□□□□ -0.88
MRPL28-210ENST00000483764 HERC1Q15751 4861 aa9.54□□□□□ -0.88
MRPL28-210ENST00000483764 PRO0628Q9UI54 55 aa9.53□□□□□ -0.88
MRPL28-210ENST00000483764 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
MRPL28-210ENST00000483764 Q5W150 140 aa9.51□□□□□ -0.89
MRPL28-210ENST00000483764 IGKV2-30P06310 120 aa9.46□□□□□ -0.89
MRPL28-210ENST00000483764 ACYP2P14621 99 aa9.46□□□□□ -0.9
MRPL28-210ENST00000483764 C9orf92A6NGG3 77 aa9.41□□□□□ -0.9
MRPL28-210ENST00000483764 HRES1P13985 223 aa9.41□□□□□ -0.9
MRPL28-210ENST00000483764 DMAC1Q96GE9 116 aa9.41□□□□□ -0.9
MRPL28-210ENST00000483764 BRK1Q8WUW1 75 aa9.38□□□□□ -0.91
MRPL28-210ENST00000483764 LINC01558Q9Y6Z2 57 aa9.37□□□□□ -0.91
MRPL28-210ENST00000483764 PSPHP1O15172 72 aa9.35□□□□□ -0.91
MRPL28-210ENST00000483764 TPRXLQ17RH7 258 aa9.34□□□□□ -0.91
MRPL28-210ENST00000483764 Q75L30 129 aa9.34□□□□□ -0.91
MRPL28-210ENST00000483764 A8MUN3 132 aa9.33□□□□□ -0.92
MRPL28-210ENST00000483764 Q5VV11 94 aa9.32□□□□□ -0.92
MRPL28-210ENST00000483764 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
MRPL28-210ENST00000483764 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
MRPL28-210ENST00000483764 C7orf65Q6ZTY9 151 aa9.29□□□□□ -0.92
MRPL28-210ENST00000483764 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
MRPL28-210ENST00000483764 XP32Q5T750 250 aa9.26□□□□□ -0.93
MRPL28-210ENST00000483764 A8MUU9 505 aa9.26□□□□□ -0.93
MRPL28-210ENST00000483764 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
MRPL28-210ENST00000483764 HMCN2Q8NDA2 5059 aa9.21□□□□□ -0.93
MRPL28-210ENST00000483764 LPAP08519 4548 aa9.21□□□□□ -0.94
MRPL28-210ENST00000483764 RPL37P61927 97 aaKnown RBP9.18□□□□□ -0.94
MRPL28-210ENST00000483764 A6NED7 52 aa9.15□□□□□ -0.94
MRPL28-210ENST00000483764 ATP11AUNQ6ZP68 121 aa9.13□□□□□ -0.95
MRPL28-210ENST00000483764 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
MRPL28-210ENST00000483764 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms