RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 COPS9Q8WXC6 57 aa1.8□□□□□ -2.12
LRCH3-217ENST00000483442 CHCHD1Q96BP2 118 aaKnown RBP1.8□□□□□ -2.12
LRCH3-217ENST00000483442 TMEM141Q96I45 108 aa1.8□□□□□ -2.12
LRCH3-217ENST00000483442 MANBALQ9NQG1 85 aa1.8□□□□□ -2.12
LRCH3-217ENST00000483442 NEBP20929 6669 aa1.8□□□□□ -2.12
LRCH3-217ENST00000483442 HIGD1CA8MV81 97 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 UMAD1C9J7I0 102 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 NPYP01303 97 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 TRACP01848 142 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 CKS2P33552 79 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 RPL37P61927 97 aaKnown RBP1.79□□□□□ -2.12
LRCH3-217ENST00000483442 DEFB116Q30KQ4 102 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 ATOH7Q8N100 152 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 C20orf78Q9BR46 151 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 VAMP8Q9BV40 100 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 CDKN2A-AS1Q9UH64 79 aa1.79□□□□□ -2.12
LRCH3-217ENST00000483442 TRBV20-1A0A075B6N2 111 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 A0A096LNJ9 63 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 ERC2-IT1O76042 136 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 TCL1BO95988 128 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 FABP4P15090 132 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 LINC00483Q53H64 154 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 PYY3Q5JQD4 70 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 Q8NDZ9 215 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 C1orf64Q8NEQ6 169 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 COX7B2Q8TF08 81 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 CLEC2BQ92478 149 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 RAB37Q96AX2 223 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 SMIM2Q9BVW6 85 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 SPANXDQ9BXN6 97 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 SERP1Q9Y6X1 66 aa1.78□□□□□ -2.12
LRCH3-217ENST00000483442 LOC107984156A0A0G2JMH3 177 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 ETDCA0A1B0GVM5 59 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 A8MUU9 505 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 SEC11AP67812 179 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 LINC01545Q5VT33 79 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 ARL17AQ8IVW1 177 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 ZNF625Q96I27 306 aaPredicted RBP1.77□□□□□ -2.13
LRCH3-217ENST00000483442 AMELXQ99217 191 aa1.77□□□□□ -2.13
LRCH3-217ENST00000483442 COLCA2A8K830 154 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 D6R8Y8 96 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 KRTAP2-3P0C7H8 128 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 ATP11AUNQ6ZP68 121 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 S100ZQ8WXG8 99 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 LIMD2Q9BT23 127 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 KRTAP2-4Q9BYR9 128 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
LRCH3-217ENST00000483442 TRAV7A0A075B6U4 112 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 C11orf86A6NJI1 115 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 H3BQ85 93 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 H7C2G1 150 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 SNCGO76070 127 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 MT-ATP8P03928 68 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 ZNF22P17026 224 aaPredicted RBP1.75□□□□□ -2.13
LRCH3-217ENST00000483442 NPC2P61916 151 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 S100A7L2Q5SY68 101 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 DSCR8Q96T75 97 aa1.75□□□□□ -2.13
LRCH3-217ENST00000483442 KANTRA0A1W2PQU2 76 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 HMSDA8MTL9 139 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 H3BPC8 53 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 NCR3O14931 201 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 SPRR1AP35321 89 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 LINC00158P58513 81 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 TMEM136Q6ZRR5 245 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 Q8N9L7 120 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 SPANXA2-OT1Q8N9U9 137 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 Q9BRP9 147 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 KCNQ1DNQ9H478 68 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 KMT2DO14686 5537 aa1.74□□□□□ -2.13
LRCH3-217ENST00000483442 TRBV10-3A0A0K0K1G6 114 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 hDV103S1A0JD37 113 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 COX17Q14061 63 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 Q5W150 140 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 Q6ZQT0 140 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 ST20-AS1Q8NBB2 130 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 V9GYV3 84 aa1.73□□□□□ -2.13
LRCH3-217ENST00000483442 TRBV10-2A0A0K0K1G8 114 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 A6NN06 94 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 PEA15Q15121 130 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 LINC00299Q6ZSB3 139 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 Q8N8P6 123 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 SMIM7Q9BQ49 75 aa1.72□□□□□ -2.13
LRCH3-217ENST00000483442 NHP2Q9NX24 153 aaKnown RBP1.72□□□□□ -2.13
LRCH3-217ENST00000483442 A0A0G2JQZ4 141 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 SMIM27A0A1W2PRY6 76 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 H3BRM9 83 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 ADCYAP1P18509 176 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 FXYD2P54710 66 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 RBM3P98179 157 aaKnown RBP1.71□□□□□ -2.14
LRCH3-217ENST00000483442 ZNF345Q14585 488 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 PMCHL2Q9BQD1 86 aa1.71□□□□□ -2.14
LRCH3-217ENST00000483442 COX7CP15954 63 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 KRTAP25-1Q3LHN0 102 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 ALKAL2Q6UX46 152 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 Q6ZRX8 168 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 OBSCN-AS1Q96MR7 158 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
LRCH3-217ENST00000483442 MDN1Q9NU22 5596 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms