RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 TRBV20-1A0A075B6N2 111 aa7.02□□□□□ -1.29
VARS-226ENST00000483275 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
VARS-226ENST00000483275 C9JAW5 83 aa7□□□□□ -1.29
VARS-226ENST00000483275 JMJD7-PLA2G4BH0Y9G9 81 aa7□□□□□ -1.29
VARS-226ENST00000483275 LCE2BO14633 110 aa7□□□□□ -1.29
VARS-226ENST00000483275 MT1FP04733 61 aa7□□□□□ -1.29
VARS-226ENST00000483275 C9orf118A6NHY6 69 aa6.99□□□□□ -1.29
VARS-226ENST00000483275 KRTAP19-1Q8IUB9 90 aa6.99□□□□□ -1.29
VARS-226ENST00000483275 SIGMAR1Q99720 223 aa6.99□□□□□ -1.29
VARS-226ENST00000483275 FAM236DA0A1B0GTK5 79 aa6.98□□□□□ -1.29
VARS-226ENST00000483275 FAM236CP0DP71 79 aa6.98□□□□□ -1.29
VARS-226ENST00000483275 C21orf62-AS1Q17RA5 79 aa6.98□□□□□ -1.29
VARS-226ENST00000483275 MACF1Q9UPN3 7388 aaKnown RBP6.97□□□□□ -1.29
VARS-226ENST00000483275 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
VARS-226ENST00000483275 TAX1BP3O14907 124 aa6.96□□□□□ -1.3
VARS-226ENST00000483275 IGKV4-1P06312 121 aa6.96□□□□□ -1.3
VARS-226ENST00000483275 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
VARS-226ENST00000483275 PDE6GP18545 87 aa6.94□□□□□ -1.3
VARS-226ENST00000483275 KRTAP10-10P60014 251 aa6.92□□□□□ -1.3
VARS-226ENST00000483275 DEFB116Q30KQ4 102 aa6.92□□□□□ -1.3
VARS-226ENST00000483275 KRTAP9-3Q9BYQ3 159 aa6.92□□□□□ -1.3
VARS-226ENST00000483275 LOC110117498A0A087WWA1 95 aa6.91□□□□□ -1.3
VARS-226ENST00000483275 H3BT86 120 aa6.91□□□□□ -1.3
VARS-226ENST00000483275 HRES1P13985 223 aa6.91□□□□□ -1.3
VARS-226ENST00000483275 NOTCH2NLQ7Z3S9 236 aa6.91□□□□□ -1.3
VARS-226ENST00000483275 LINC00472Q9H8W2 130 aa6.91□□□□□ -1.3
VARS-226ENST00000483275 LINC00313P59037 77 aa6.9□□□□□ -1.3
VARS-226ENST00000483275 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
VARS-226ENST00000483275 Q6ZQT0 140 aa6.9□□□□□ -1.3
VARS-226ENST00000483275 C14orf132Q9NPU4 83 aa6.9□□□□□ -1.3
VARS-226ENST00000483275 A0A1B0GW54 56 aa6.89□□□□□ -1.31
VARS-226ENST00000483275 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
VARS-226ENST00000483275 SPCS1Q9Y6A9 102 aa6.89□□□□□ -1.31
VARS-226ENST00000483275 J3KT08 172 aa6.88□□□□□ -1.31
VARS-226ENST00000483275 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
VARS-226ENST00000483275 MTURNQ8N3F0 131 aa6.86□□□□□ -1.31
VARS-226ENST00000483275 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
VARS-226ENST00000483275 NDUFB1O75438 58 aa6.85□□□□□ -1.31
VARS-226ENST00000483275 PCP4L1A6NKN8 68 aa6.84□□□□□ -1.31
VARS-226ENST00000483275 C8orf87E5RJ46 101 aa6.84□□□□□ -1.31
VARS-226ENST00000483275 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
VARS-226ENST00000483275 NREPQ16612 68 aa6.82□□□□□ -1.32
VARS-226ENST00000483275 K7EP34 96 aa6.78□□□□□ -1.32
VARS-226ENST00000483275 A8MWP4 228 aa6.77□□□□□ -1.33
VARS-226ENST00000483275 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
VARS-226ENST00000483275 LINC00846Q9NV44 126 aa6.74□□□□□ -1.33
VARS-226ENST00000483275 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
VARS-226ENST00000483275 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
VARS-226ENST00000483275 C8orf17Q9NRJ1 99 aa6.73□□□□□ -1.33
VARS-226ENST00000483275 IGKV3D-7A0A0C4DH55 119 aa6.71□□□□□ -1.34
VARS-226ENST00000483275 BPY2O14599 106 aa6.7□□□□□ -1.34
VARS-226ENST00000483275 SPINK7P58062 85 aa6.7□□□□□ -1.34
VARS-226ENST00000483275 PRR15Q8IV56 129 aa6.7□□□□□ -1.34
VARS-226ENST00000483275 ZCCHC13Q8WW36 166 aaKnown RBP6.7□□□□□ -1.34
VARS-226ENST00000483275 PRO0461Q9UI25 63 aa6.7□□□□□ -1.34
VARS-226ENST00000483275 F8W1H4 67 aa6.68□□□□□ -1.34
VARS-226ENST00000483275 Q6ZVQ6 151 aa6.68□□□□□ -1.34
VARS-226ENST00000483275 Q8N9P0 234 aaPredicted RBP6.68□□□□□ -1.34
VARS-226ENST00000483275 WFDC13Q8IUB5 93 aa6.67□□□□□ -1.34
VARS-226ENST00000483275 K7EQZ3 153 aa6.66□□□□□ -1.34
VARS-226ENST00000483275 UBL5Q9BZL1 73 aa6.66□□□□□ -1.34
VARS-226ENST00000483275 TMEM254Q8TBM7 123 aa6.64□□□□□ -1.35
VARS-226ENST00000483275 MRPL34Q9BQ48 92 aaKnown RBP6.64□□□□□ -1.35
VARS-226ENST00000483275 MMP24-AS1A0A0U1RRL7 71 aa6.63□□□□□ -1.35
VARS-226ENST00000483275 hDV103S1A0JD37 113 aa6.63□□□□□ -1.35
VARS-226ENST00000483275 NDUFS5O43920 106 aa6.62□□□□□ -1.35
VARS-226ENST00000483275 ETDBQ3ZM63 59 aa6.61□□□□□ -1.35
VARS-226ENST00000483275 NEBP20929 6669 aa6.58□□□□□ -1.36
VARS-226ENST00000483275 KRTAP6-3Q3LI67 103 aa6.57□□□□□ -1.36
VARS-226ENST00000483275 Q8N9L7 120 aa6.57□□□□□ -1.36
VARS-226ENST00000483275 CASC2Q6XLA1 102 aa6.56□□□□□ -1.36
VARS-226ENST00000483275 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
VARS-226ENST00000483275 ACYP1P07311 99 aa6.5□□□□□ -1.37
VARS-226ENST00000483275 CXCL6P80162 114 aa6.49□□□□□ -1.37
VARS-226ENST00000483275 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
VARS-226ENST00000483275 IGKV2D-30A0A075B6S6 120 aa6.46□□□□□ -1.38
VARS-226ENST00000483275 IGKV2-30P06310 120 aa6.46□□□□□ -1.38
VARS-226ENST00000483275 A0A1B0GV90 55 aa6.44□□□□□ -1.38
VARS-226ENST00000483275 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
VARS-226ENST00000483275 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
VARS-226ENST00000483275 Q5W150 140 aa6.43□□□□□ -1.38
VARS-226ENST00000483275 ATP5EP2Q5VTU8 51 aa6.4□□□□□ -1.38
VARS-226ENST00000483275 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.38
VARS-226ENST00000483275 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
VARS-226ENST00000483275 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
VARS-226ENST00000483275 A6NN06 94 aa6.34□□□□□ -1.39
VARS-226ENST00000483275 J3QR89 54 aa6.33□□□□□ -1.4
VARS-226ENST00000483275 MT1BP07438 61 aa6.33□□□□□ -1.4
VARS-226ENST00000483275 C5orf47Q569G3 176 aa6.33□□□□□ -1.4
VARS-226ENST00000483275 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
VARS-226ENST00000483275 C4orf26Q17RF5 130 aa6.32□□□□□ -1.4
VARS-226ENST00000483275 FAM236AA0A1B0GUQ0 79 aa6.31□□□□□ -1.4
VARS-226ENST00000483275 FAM236BA0A1B0GV22 79 aa6.31□□□□□ -1.4
VARS-226ENST00000483275 TRAV22A0A0B4J277 110 aa6.26□□□□□ -1.41
VARS-226ENST00000483275 KRTAP20-1Q3LI63 56 aa6.26□□□□□ -1.41
VARS-226ENST00000483275 Q5VV11 94 aa6.26□□□□□ -1.41
VARS-226ENST00000483275 A0A087WVE0 104 aa6.24□□□□□ -1.41
VARS-226ENST00000483275 UQCRQO14949 82 aa6.24□□□□□ -1.41
VARS-226ENST00000483275 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
VARS-226ENST00000483275 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms