RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
SSR4-209ENST00000482902 STARD9Q9P2P6 4700 aa10.83□□□□□ -0.68
SSR4-209ENST00000482902 VPS13DQ5THJ4 4388 aa10.81□□□□□ -0.68
SSR4-209ENST00000482902 RTL8CO15255 209 aa10.8□□□□□ -0.68
SSR4-209ENST00000482902 PSORS1C2Q9UIG4 136 aa10.8□□□□□ -0.68
SSR4-209ENST00000482902 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
SSR4-209ENST00000482902 IGLV5-52A0A0A0MRZ9 124 aa10.78□□□□□ -0.68
SSR4-209ENST00000482902 WWC2-AS2Q96NR7 200 aa10.78□□□□□ -0.68
SSR4-209ENST00000482902 ANAPC11Q9NYG5 84 aa10.76□□□□□ -0.69
SSR4-209ENST00000482902 A0A1B0GVX0 72 aa10.75□□□□□ -0.69
SSR4-209ENST00000482902 IGHV6-1A0A0B4J1U7 121 aa10.74□□□□□ -0.69
SSR4-209ENST00000482902 HECTD4Q9Y4D8 3996 aa10.74□□□□□ -0.69
SSR4-209ENST00000482902 ZNF861PO60384 105 aa10.73□□□□□ -0.69
SSR4-209ENST00000482902 MRPL34Q9BQ48 92 aaKnown RBP10.72□□□□□ -0.69
SSR4-209ENST00000482902 PRR26Q8N8Z3 221 aa10.7□□□□□ -0.7
SSR4-209ENST00000482902 DNAH8Q96JB1 4490 aa10.7□□□□□ -0.7
SSR4-209ENST00000482902 A0A087X002 238 aa10.69□□□□□ -0.7
SSR4-209ENST00000482902 CDK2AP2O75956 126 aa10.69□□□□□ -0.7
SSR4-209ENST00000482902 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
SSR4-209ENST00000482902 PRKDCP78527 4128 aaKnown RBP10.68□□□□□ -0.7
SSR4-209ENST00000482902 DNAH17Q9UFH2 4485 aa10.68□□□□□ -0.7
SSR4-209ENST00000482902 DNAH2Q9P225 4427 aa10.68□□□□□ -0.7
SSR4-209ENST00000482902 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
SSR4-209ENST00000482902 KMT2AQ03164 3969 aa10.66□□□□□ -0.7
SSR4-209ENST00000482902 LINC00313P59037 77 aa10.64□□□□□ -0.71
SSR4-209ENST00000482902 KRTAP13-3Q3SY46 172 aa10.62□□□□□ -0.71
SSR4-209ENST00000482902 C1orf134Q5TEV5 83 aa10.62□□□□□ -0.71
SSR4-209ENST00000482902 Q5W150 140 aa10.62□□□□□ -0.71
SSR4-209ENST00000482902 ALMS1Q8TCU4 4167 aa10.61□□□□□ -0.71
SSR4-209ENST00000482902 IGLV7-43P04211 117 aa10.6□□□□□ -0.71
SSR4-209ENST00000482902 PRAC1Q96KF2 57 aa10.59□□□□□ -0.71
SSR4-209ENST00000482902 SPINK6Q6UWN8 80 aa10.58□□□□□ -0.72
SSR4-209ENST00000482902 C8orf87E5RJ46 101 aa10.57□□□□□ -0.72
SSR4-209ENST00000482902 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
SSR4-209ENST00000482902 ACYP2P14621 99 aa10.55□□□□□ -0.72
SSR4-209ENST00000482902 ADM2Q7Z4H4 148 aa10.54□□□□□ -0.72
SSR4-209ENST00000482902 FBN3Q75N90 2809 aa10.53□□□□□ -0.72
SSR4-209ENST00000482902 LY6G6CO95867 125 aa10.52□□□□□ -0.73
SSR4-209ENST00000482902 PLA2G1BP04054 148 aaKnown RBP10.51□□□□□ -0.73
SSR4-209ENST00000482902 TGP01266 2768 aa10.5□□□□□ -0.73
SSR4-209ENST00000482902 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
SSR4-209ENST00000482902 MEGF8Q7Z7M0 2845 aa10.5□□□□□ -0.73
SSR4-209ENST00000482902 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
SSR4-209ENST00000482902 KRTAP10-2P60368 255 aa10.45□□□□□ -0.74
SSR4-209ENST00000482902 SPATA8Q6RVD6 105 aa10.45□□□□□ -0.74
SSR4-209ENST00000482902 DNAH11Q96DT5 4516 aa10.45□□□□□ -0.74
SSR4-209ENST00000482902 A0A1B0GU69 56 aa10.44□□□□□ -0.74
SSR4-209ENST00000482902 DNHD1Q96M86 4753 aa10.42□□□□□ -0.74
SSR4-209ENST00000482902 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
SSR4-209ENST00000482902 DNAH6Q9C0G6 4158 aa10.42□□□□□ -0.74
SSR4-209ENST00000482902 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
SSR4-209ENST00000482902 KRTAP13-2Q52LG2 175 aa10.35□□□□□ -0.75
SSR4-209ENST00000482902 MIR22HGQ0VDD5 57 aa10.35□□□□□ -0.75
SSR4-209ENST00000482902 C4orf48Q5BLP8 95 aa10.33□□□□□ -0.76
SSR4-209ENST00000482902 UQCR11O14957 56 aa10.32□□□□□ -0.76
SSR4-209ENST00000482902 KRTAP10-1P60331 282 aa10.32□□□□□ -0.76
SSR4-209ENST00000482902 IGKV2-30P06310 120 aa10.31□□□□□ -0.76
SSR4-209ENST00000482902 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
SSR4-209ENST00000482902 Q6ZSA8 131 aa10.3□□□□□ -0.76
SSR4-209ENST00000482902 RETNLBQ9BQ08 111 aa10.29□□□□□ -0.76
SSR4-209ENST00000482902 LRP1BQ9NZR2 4599 aa10.28□□□□□ -0.76
SSR4-209ENST00000482902 KRTAP1-4P0C5Y4 121 aa10.22□□□□□ -0.77
SSR4-209ENST00000482902 PKD1P98161 4303 aa10.21□□□□□ -0.77
SSR4-209ENST00000482902 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
SSR4-209ENST00000482902 KRTAP16-1A8MUX0 517 aa10.2□□□□□ -0.78
SSR4-209ENST00000482902 HYDINQ4G0P3 5121 aa10.19□□□□□ -0.78
SSR4-209ENST00000482902 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
SSR4-209ENST00000482902 VPS13BQ7Z7G8 4022 aa10.12□□□□□ -0.79
SSR4-209ENST00000482902 IGKV2D-30A0A075B6S6 120 aa10.12□□□□□ -0.79
SSR4-209ENST00000482902 TYMSOSQ8TAI1 123 aa10.11□□□□□ -0.79
SSR4-209ENST00000482902 H3BS24 57 aa10.1□□□□□ -0.79
SSR4-209ENST00000482902 SPINK1P00995 79 aa10.06□□□□□ -0.8
SSR4-209ENST00000482902 LINC00304Q8N9R0 145 aa9.96□□□□□ -0.82
SSR4-209ENST00000482902 A8MUU9 505 aa9.93□□□□□ -0.82
SSR4-209ENST00000482902 H0YAA0 97 aa9.93□□□□□ -0.82
SSR4-209ENST00000482902 Q8N1X5 172 aa9.93□□□□□ -0.82
SSR4-209ENST00000482902 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
SSR4-209ENST00000482902 PKHD1P08F94 4074 aa9.9□□□□□ -0.83
SSR4-209ENST00000482902 SACSQ9NZJ4 4579 aa9.88□□□□□ -0.83
SSR4-209ENST00000482902 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
SSR4-209ENST00000482902 KRTAP25-1Q3LHN0 102 aa9.86□□□□□ -0.83
SSR4-209ENST00000482902 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
SSR4-209ENST00000482902 C9orf92A6NGG3 77 aa9.79□□□□□ -0.84
SSR4-209ENST00000482902 KRTAP21-3Q3LHN1 58 aa9.77□□□□□ -0.84
SSR4-209ENST00000482902 ROMO1P60602 79 aa9.75□□□□□ -0.85
SSR4-209ENST00000482902 A0A1B0GU33 70 aa9.75□□□□□ -0.85
SSR4-209ENST00000482902 C20orf166-AS1Q96NR2 134 aa9.74□□□□□ -0.85
SSR4-209ENST00000482902 FAT1Q14517 4588 aa9.74□□□□□ -0.85
SSR4-209ENST00000482902 H1FX-AS1Q4G0G2 97 aa9.72□□□□□ -0.85
SSR4-209ENST00000482902 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.85
SSR4-209ENST00000482902 A0A1B0GVY2 172 aa9.71□□□□□ -0.86
SSR4-209ENST00000482902 PKHD1L1Q86WI1 4243 aa9.7□□□□□ -0.86
SSR4-209ENST00000482902 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
SSR4-209ENST00000482902 KRTAP3-1Q9BYR8 98 aa9.67□□□□□ -0.86
SSR4-209ENST00000482902 FLG2Q5D862 2391 aaPredicted RBP9.6□□□□□ -0.87
SSR4-209ENST00000482902 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
SSR4-209ENST00000482902 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
SSR4-209ENST00000482902 K7ERS5 55 aa9.52□□□□□ -0.89
SSR4-209ENST00000482902 P0C880 135 aa9.51□□□□□ -0.89
SSR4-209ENST00000482902 RYR2Q92736 4967 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms