RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 CSMD3Q7Z407 3707 aa6.59□□□□□ -1.35
RPGR-208ENST00000482855 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
RPGR-208ENST00000482855 ADM2Q7Z4H4 148 aa6.59□□□□□ -1.35
RPGR-208ENST00000482855 DNAH7Q8WXX0 4024 aa6.58□□□□□ -1.36
RPGR-208ENST00000482855 Q5W150 140 aa6.57□□□□□ -1.36
RPGR-208ENST00000482855 A0A1B0GU69 56 aa6.57□□□□□ -1.36
RPGR-208ENST00000482855 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
RPGR-208ENST00000482855 LINC00483Q53H64 154 aa6.56□□□□□ -1.36
RPGR-208ENST00000482855 HUWE1Q7Z6Z7 4374 aaKnown RBP6.56□□□□□ -1.36
RPGR-208ENST00000482855 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
RPGR-208ENST00000482855 KRTAP13-3Q3SY46 172 aa6.55□□□□□ -1.36
RPGR-208ENST00000482855 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
RPGR-208ENST00000482855 NOTCH1P46531 2555 aa6.55□□□□□ -1.36
RPGR-208ENST00000482855 PANO1I0J062 215 aa6.54□□□□□ -1.36
RPGR-208ENST00000482855 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
RPGR-208ENST00000482855 ZNF706Q9Y5V0 76 aaPredicted RBP6.54□□□□□ -1.36
RPGR-208ENST00000482855 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
RPGR-208ENST00000482855 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
RPGR-208ENST00000482855 LYSTQ99698 3801 aa6.53□□□□□ -1.36
RPGR-208ENST00000482855 RTL8CO15255 209 aa6.53□□□□□ -1.36
RPGR-208ENST00000482855 SPINK6Q6UWN8 80 aa6.53□□□□□ -1.36
RPGR-208ENST00000482855 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
RPGR-208ENST00000482855 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
RPGR-208ENST00000482855 DNAH6Q9C0G6 4158 aa6.49□□□□□ -1.37
RPGR-208ENST00000482855 UQCR11O14957 56 aa6.49□□□□□ -1.37
RPGR-208ENST00000482855 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
RPGR-208ENST00000482855 NUPR2A6NF83 97 aa6.47□□□□□ -1.37
RPGR-208ENST00000482855 SPACA4Q8TDM5 124 aa6.46□□□□□ -1.37
RPGR-208ENST00000482855 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.37
RPGR-208ENST00000482855 FAM229AH3BQW9 127 aa6.43□□□□□ -1.38
RPGR-208ENST00000482855 H3BS24 57 aa6.43□□□□□ -1.38
RPGR-208ENST00000482855 PSORS1C2Q9UIG4 136 aa6.43□□□□□ -1.38
RPGR-208ENST00000482855 RETNLBQ9BQ08 111 aa6.42□□□□□ -1.38
RPGR-208ENST00000482855 ZNF861PO60384 105 aa6.42□□□□□ -1.38
RPGR-208ENST00000482855 CSAG1Q6PB30 78 aa6.42□□□□□ -1.38
RPGR-208ENST00000482855 APLNQ9ULZ1 77 aa6.42□□□□□ -1.38
RPGR-208ENST00000482855 IGLV5-52A0A0A0MRZ9 124 aa6.41□□□□□ -1.38
RPGR-208ENST00000482855 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
RPGR-208ENST00000482855 STAB2Q8WWQ8 2551 aa6.4□□□□□ -1.38
RPGR-208ENST00000482855 CIRBP-AS1Q8TBR5 109 aa6.4□□□□□ -1.38
RPGR-208ENST00000482855 NBDYA0A0U1RRE5 68 aa6.39□□□□□ -1.39
RPGR-208ENST00000482855 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
RPGR-208ENST00000482855 TGP01266 2768 aa6.35□□□□□ -1.39
RPGR-208ENST00000482855 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
RPGR-208ENST00000482855 IGLV7-43P04211 117 aa6.32□□□□□ -1.4
RPGR-208ENST00000482855 FRAS1Q86XX4 4008 aa6.32□□□□□ -1.4
RPGR-208ENST00000482855 IGKV2D-30A0A075B6S6 120 aa6.31□□□□□ -1.4
RPGR-208ENST00000482855 STARD9Q9P2P6 4700 aa6.31□□□□□ -1.4
RPGR-208ENST00000482855 SSBP3-AS1Q7Z2R9 100 aa6.31□□□□□ -1.4
RPGR-208ENST00000482855 PLECQ15149 4684 aaKnown RBP6.3□□□□□ -1.4
RPGR-208ENST00000482855 A0A087WTM6 91 aa6.3□□□□□ -1.4
RPGR-208ENST00000482855 RYR2Q92736 4967 aa6.3□□□□□ -1.4
RPGR-208ENST00000482855 VPS13DQ5THJ4 4388 aa6.29□□□□□ -1.4
RPGR-208ENST00000482855 SACSQ9NZJ4 4579 aa6.29□□□□□ -1.4
RPGR-208ENST00000482855 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
RPGR-208ENST00000482855 SPINK1P00995 79 aa6.26□□□□□ -1.41
RPGR-208ENST00000482855 HECTD4Q9Y4D8 3996 aa6.24□□□□□ -1.41
RPGR-208ENST00000482855 C1orf134Q5TEV5 83 aa6.23□□□□□ -1.41
RPGR-208ENST00000482855 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
RPGR-208ENST00000482855 DNAH17Q9UFH2 4485 aa6.22□□□□□ -1.41
RPGR-208ENST00000482855 LY6G6CO95867 125 aa6.21□□□□□ -1.41
RPGR-208ENST00000482855 A8MUU9 505 aa6.2□□□□□ -1.42
RPGR-208ENST00000482855 KRTAP25-1Q3LHN0 102 aa6.2□□□□□ -1.42
RPGR-208ENST00000482855 Q8N1X5 172 aa6.18□□□□□ -1.42
RPGR-208ENST00000482855 RYR3Q15413 4870 aa6.18□□□□□ -1.42
RPGR-208ENST00000482855 H0YAA0 97 aa6.17□□□□□ -1.42
RPGR-208ENST00000482855 Q6ZSA8 131 aa6.17□□□□□ -1.42
RPGR-208ENST00000482855 KRTAP13-2Q52LG2 175 aa6.16□□□□□ -1.42
RPGR-208ENST00000482855 LINC00304Q8N9R0 145 aa6.16□□□□□ -1.42
RPGR-208ENST00000482855 ROMO1P60602 79 aa6.15□□□□□ -1.43
RPGR-208ENST00000482855 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
RPGR-208ENST00000482855 A0A1B0GU33 70 aa6.11□□□□□ -1.43
RPGR-208ENST00000482855 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
RPGR-208ENST00000482855 DNAH2Q9P225 4427 aa6.09□□□□□ -1.43
RPGR-208ENST00000482855 HYDINQ4G0P3 5121 aa6.09□□□□□ -1.43
RPGR-208ENST00000482855 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
RPGR-208ENST00000482855 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
RPGR-208ENST00000482855 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
RPGR-208ENST00000482855 KMT2AQ03164 3969 aa6.04□□□□□ -1.44
RPGR-208ENST00000482855 DYNC1H1Q14204 4646 aaKnown RBP6.04□□□□□ -1.44
RPGR-208ENST00000482855 FLG2Q5D862 2391 aaPredicted RBP6.04□□□□□ -1.44
RPGR-208ENST00000482855 K7ERS5 55 aa6.03□□□□□ -1.44
RPGR-208ENST00000482855 DNAH11Q96DT5 4516 aa6.02□□□□□ -1.45
RPGR-208ENST00000482855 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
RPGR-208ENST00000482855 KRTAP1-4P0C5Y4 121 aa6.01□□□□□ -1.45
RPGR-208ENST00000482855 PKD1P98161 4303 aa6□□□□□ -1.45
RPGR-208ENST00000482855 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
RPGR-208ENST00000482855 P0C880 135 aa5.96□□□□□ -1.46
RPGR-208ENST00000482855 KRTAP3-1Q9BYR8 98 aa5.96□□□□□ -1.46
RPGR-208ENST00000482855 DNAH5Q8TE73 4624 aa5.94□□□□□ -1.46
RPGR-208ENST00000482855 COX6B2Q6YFQ2 88 aa5.93□□□□□ -1.46
RPGR-208ENST00000482855 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
RPGR-208ENST00000482855 HERC2O95714 4834 aa5.91□□□□□ -1.46
RPGR-208ENST00000482855 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
RPGR-208ENST00000482855 LRP1BQ9NZR2 4599 aa5.89□□□□□ -1.47
RPGR-208ENST00000482855 C9orf92A6NGG3 77 aa5.89□□□□□ -1.47
RPGR-208ENST00000482855 C20orf166-AS1Q96NR2 134 aa5.88□□□□□ -1.47
RPGR-208ENST00000482855 RPS29P62273 56 aaKnown RBP5.87□□□□□ -1.47
RPGR-208ENST00000482855 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
RPGR-208ENST00000482855 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms