RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 BAALC-AS2P0C853 105 aa3.72□□□□□ -1.81
CLK1-212ENST00000482590 LINC00483Q53H64 154 aa3.72□□□□□ -1.81
CLK1-212ENST00000482590 SMIM27A0A1W2PRY6 76 aa3.71□□□□□ -1.82
CLK1-212ENST00000482590 COX7CP15954 63 aa3.71□□□□□ -1.82
CLK1-212ENST00000482590 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
CLK1-212ENST00000482590 UNQ6190/PRO20217Q6UXQ8 127 aa3.71□□□□□ -1.82
CLK1-212ENST00000482590 Q8N8P6 123 aa3.71□□□□□ -1.82
CLK1-212ENST00000482590 NUPR1O60356 82 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 SNCGO76070 127 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 C2orf82Q6UX34 121 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 TMEM136Q6ZRR5 245 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 TMEM141Q96I45 108 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 TOMM7Q9P0U1 55 aa3.7□□□□□ -1.82
CLK1-212ENST00000482590 LOC107984156A0A0G2JMH3 177 aa3.69□□□□□ -1.82
CLK1-212ENST00000482590 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
CLK1-212ENST00000482590 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
CLK1-212ENST00000482590 PEA15Q15121 130 aa3.69□□□□□ -1.82
CLK1-212ENST00000482590 ARL17AQ8IVW1 177 aa3.69□□□□□ -1.82
CLK1-212ENST00000482590 HIGD2AQ9BW72 106 aa3.69□□□□□ -1.82
CLK1-212ENST00000482590 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
CLK1-212ENST00000482590 Q8IZM0 81 aa3.67□□□□□ -1.82
CLK1-212ENST00000482590 R4GN34 69 aa3.67□□□□□ -1.82
CLK1-212ENST00000482590 ADCYAP1P18509 176 aa3.66□□□□□ -1.82
CLK1-212ENST00000482590 SEC11AP67812 179 aa3.66□□□□□ -1.82
CLK1-212ENST00000482590 C22orf24Q9Y442 160 aa3.66□□□□□ -1.82
CLK1-212ENST00000482590 MUC2Q02817 5179 aa3.66□□□□□ -1.82
CLK1-212ENST00000482590 F8VRH5 84 aa3.65□□□□□ -1.83
CLK1-212ENST00000482590 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
CLK1-212ENST00000482590 AMELXQ99217 191 aa3.65□□□□□ -1.83
CLK1-212ENST00000482590 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
CLK1-212ENST00000482590 K7EMI3 77 aa3.64□□□□□ -1.83
CLK1-212ENST00000482590 BCE1O60756 84 aa3.64□□□□□ -1.83
CLK1-212ENST00000482590 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
CLK1-212ENST00000482590 CDKN2A-AS1Q9UH64 79 aa3.64□□□□□ -1.83
CLK1-212ENST00000482590 NDUFA12Q9UI09 145 aa3.64□□□□□ -1.83
CLK1-212ENST00000482590 ERC2-IT1O76042 136 aa3.63□□□□□ -1.83
CLK1-212ENST00000482590 MUC17Q685J3 4493 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 IGIPA6NJ69 53 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 K7EP34 96 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 COX7B2Q8TF08 81 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 Q9BRP9 147 aa3.62□□□□□ -1.83
CLK1-212ENST00000482590 TRAV12-1A0A0B4J245 112 aa3.61□□□□□ -1.83
CLK1-212ENST00000482590 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
CLK1-212ENST00000482590 P0C880 135 aa3.61□□□□□ -1.83
CLK1-212ENST00000482590 MIR22HGQ0VDD5 57 aa3.61□□□□□ -1.83
CLK1-212ENST00000482590 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
CLK1-212ENST00000482590 IGKV2-28A0A075B6P5 120 aa3.6□□□□□ -1.83
CLK1-212ENST00000482590 F8W1H4 67 aa3.6□□□□□ -1.83
CLK1-212ENST00000482590 IGKV2D-28P01615 120 aa3.6□□□□□ -1.83
CLK1-212ENST00000482590 RBM3P98179 157 aaKnown RBP3.6□□□□□ -1.83
CLK1-212ENST00000482590 Q1T7F1 81 aa3.6□□□□□ -1.83
CLK1-212ENST00000482590 H3BRM9 83 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 PRLHP81277 87 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 LCE1CQ5T751 118 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 PMCHL2Q9BQD1 86 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 SMCO4Q9NRQ5 59 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.83
CLK1-212ENST00000482590 CCKP06307 115 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
CLK1-212ENST00000482590 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 KRTAP13-2Q52LG2 175 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 S100A7L2Q5SY68 101 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 ANAPC11Q9NYG5 84 aa3.58□□□□□ -1.84
CLK1-212ENST00000482590 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
CLK1-212ENST00000482590 A0A1W2PNM2 257 aa3.57□□□□□ -1.84
CLK1-212ENST00000482590 IGKCP01834 107 aa3.57□□□□□ -1.84
CLK1-212ENST00000482590 PPDPFLQ8WWR9 84 aa3.57□□□□□ -1.84
CLK1-212ENST00000482590 HRES1P13985 223 aa3.56□□□□□ -1.84
CLK1-212ENST00000482590 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.56□□□□□ -1.84
CLK1-212ENST00000482590 hADV29S1A0JD25 119 aa3.55□□□□□ -1.84
CLK1-212ENST00000482590 IGLC3P0DOY3 106 aa3.55□□□□□ -1.84
CLK1-212ENST00000482590 SFTA2Q6UW10 78 aa3.55□□□□□ -1.84
CLK1-212ENST00000482590 Q8N9L7 120 aa3.55□□□□□ -1.84
CLK1-212ENST00000482590 ATOX1O00244 68 aa3.54□□□□□ -1.84
CLK1-212ENST00000482590 COX17Q14061 63 aa3.54□□□□□ -1.84
CLK1-212ENST00000482590 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
CLK1-212ENST00000482590 ZNF625Q96I27 306 aaPredicted RBP3.54□□□□□ -1.84
CLK1-212ENST00000482590 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
CLK1-212ENST00000482590 KRTDAPP60985 99 aa3.53□□□□□ -1.84
CLK1-212ENST00000482590 TMEM170BQ5T4T1 132 aa3.53□□□□□ -1.84
CLK1-212ENST00000482590 UQCR10Q9UDW1 63 aa3.53□□□□□ -1.84
CLK1-212ENST00000482590 LINC00158P58513 81 aa3.52□□□□□ -1.85
CLK1-212ENST00000482590 SPRR4Q96PI1 79 aa3.52□□□□□ -1.85
CLK1-212ENST00000482590 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
CLK1-212ENST00000482590 BAGE3Q86Y29 109 aa3.51□□□□□ -1.85
CLK1-212ENST00000482590 ETDCA0A1B0GVM5 59 aa3.5□□□□□ -1.85
CLK1-212ENST00000482590 NCR3O14931 201 aa3.5□□□□□ -1.85
CLK1-212ENST00000482590 C18orf32Q8TCD1 76 aa3.5□□□□□ -1.85
CLK1-212ENST00000482590 PRO0461Q9UI25 63 aa3.5□□□□□ -1.85
CLK1-212ENST00000482590 PMCHL1Q16048 86 aa3.49□□□□□ -1.85
CLK1-212ENST00000482590 CYP4F30PQ9H0H9 118 aa3.49□□□□□ -1.85
CLK1-212ENST00000482590 TRAV13-2A0A0B4J235 113 aa3.48□□□□□ -1.85
CLK1-212ENST00000482590 SPINK1P00995 79 aa3.48□□□□□ -1.85
CLK1-212ENST00000482590 SMIM13P0DJ93 91 aa3.48□□□□□ -1.85
CLK1-212ENST00000482590 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
CLK1-212ENST00000482590 CDC42SE1Q9NRR8 79 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms