RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	HIST1H4G	Q99525	98 aa		4.22	□□□□□ -1.73
UBE2F-222	ENST00000482096	SIGMAR1	Q99720	223 aa		4.22	□□□□□ -1.73
UBE2F-222	ENST00000482096		A0A1W2PNM2	257 aa		4.21	□□□□□ -1.74
UBE2F-222	ENST00000482096	FAM218A	Q96MZ4	157 aa		4.21	□□□□□ -1.74
UBE2F-222	ENST00000482096	LINC00846	Q9NV44	126 aa		4.21	□□□□□ -1.74
UBE2F-222	ENST00000482096	IGKV4-1	P06312	121 aa		4.2	□□□□□ -1.74
UBE2F-222	ENST00000482096	KRTAP19-6	Q3LI70	58 aa		4.2	□□□□□ -1.74
UBE2F-222	ENST00000482096	HIST1H2BL	Q99880	126 aa		4.19	□□□□□ -1.74
UBE2F-222	ENST00000482096		A0A1B0GX51	115 aa		4.18	□□□□□ -1.74
UBE2F-222	ENST00000482096	FABP2	P12104	132 aa		4.18	□□□□□ -1.74
UBE2F-222	ENST00000482096	HIST3H2BB	Q8N257	126 aa		4.18	□□□□□ -1.74
UBE2F-222	ENST00000482096	RAB37	Q96AX2	223 aa		4.18	□□□□□ -1.74
UBE2F-222	ENST00000482096		A0A0B4J2C4	111 aa		4.17	□□□□□ -1.74
UBE2F-222	ENST00000482096	TRBV7-4	A0A0J9YYF1	115 aa		4.17	□□□□□ -1.74
UBE2F-222	ENST00000482096	COX8A	P10176	69 aa		4.17	□□□□□ -1.74
UBE2F-222	ENST00000482096	MTURN	Q8N3F0	131 aa		4.17	□□□□□ -1.74
UBE2F-222	ENST00000482096	MACF1	Q9UPN3	7388 aa	Known RBP	4.17	□□□□□ -1.74
UBE2F-222	ENST00000482096	DLEU1	O43261	78 aa		4.16	□□□□□ -1.74
UBE2F-222	ENST00000482096	S100A2	P29034	98 aa		4.16	□□□□□ -1.74
UBE2F-222	ENST00000482096	LINC00472	Q9H8W2	130 aa		4.16	□□□□□ -1.74
UBE2F-222	ENST00000482096	DEFB116	Q30KQ4	102 aa		4.15	□□□□□ -1.75
UBE2F-222	ENST00000482096	ANKRD29	Q8N6D5	301 aa		4.15	□□□□□ -1.75
UBE2F-222	ENST00000482096	SYNE2	Q8WXH0	6885 aa	Known RBP	4.15	□□□□□ -1.75
UBE2F-222	ENST00000482096	IGHV6-1	A0A0B4J1U7	121 aa		4.14	□□□□□ -1.75
UBE2F-222	ENST00000482096	KRTAP6-3	Q3LI67	103 aa		4.13	□□□□□ -1.75
UBE2F-222	ENST00000482096	HIGD1B	Q9P298	99 aa		4.13	□□□□□ -1.75
UBE2F-222	ENST00000482096		A8MWP4	228 aa		4.12	□□□□□ -1.75
UBE2F-222	ENST00000482096	C8orf87	E5RJ46	101 aa		4.12	□□□□□ -1.75
UBE2F-222	ENST00000482096	SPINK7	P58062	85 aa		4.12	□□□□□ -1.75
UBE2F-222	ENST00000482096	ZCCHC13	Q8WW36	166 aa	Known RBP	4.12	□□□□□ -1.75
UBE2F-222	ENST00000482096	PRO1854	Q9UHT4	67 aa		4.12	□□□□□ -1.75
UBE2F-222	ENST00000482096		A0A1B0GVX0	72 aa		4.11	□□□□□ -1.75
UBE2F-222	ENST00000482096		H3BQ85	93 aa		4.11	□□□□□ -1.75
UBE2F-222	ENST00000482096	TRAC	P01848	142 aa		4.11	□□□□□ -1.75
UBE2F-222	ENST00000482096	CCK	P06307	115 aa		4.11	□□□□□ -1.75
UBE2F-222	ENST00000482096	C14orf144	Q96I85	54 aa		4.11	□□□□□ -1.75
UBE2F-222	ENST00000482096		A0A1B0GV72	72 aa		4.1	□□□□□ -1.75
UBE2F-222	ENST00000482096	NDUFAF8	A1L188	74 aa		4.1	□□□□□ -1.75
UBE2F-222	ENST00000482096	ORMDL1	Q9P0S3	153 aa		4.1	□□□□□ -1.75
UBE2F-222	ENST00000482096	TMEM256-PLSCR3	K7ERE1	68 aa		4.09	□□□□□ -1.75
UBE2F-222	ENST00000482096	DNAL4	O96015	105 aa		4.09	□□□□□ -1.75
UBE2F-222	ENST00000482096	C2orf91	Q6ZV80	131 aa		4.09	□□□□□ -1.75
UBE2F-222	ENST00000482096	CEND1	Q8N111	149 aa		4.09	□□□□□ -1.75
UBE2F-222	ENST00000482096	S100A6	P06703	90 aa		4.08	□□□□□ -1.76
UBE2F-222	ENST00000482096	KRTAP10-7	P60409	375 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2F-222	ENST00000482096	LCE1F	Q5T754	118 aa		4.08	□□□□□ -1.76
UBE2F-222	ENST00000482096	FXYD2	P54710	66 aa		4.07	□□□□□ -1.76
UBE2F-222	ENST00000482096	SPATA45	Q537H7	98 aa		4.06	□□□□□ -1.76
UBE2F-222	ENST00000482096	WFDC13	Q8IUB5	93 aa		4.06	□□□□□ -1.76
UBE2F-222	ENST00000482096		J3KT08	172 aa		4.05	□□□□□ -1.76
UBE2F-222	ENST00000482096	VPS25	Q9BRG1	176 aa		4.04	□□□□□ -1.76
UBE2F-222	ENST00000482096	COX6C	P09669	75 aa		4.03	□□□□□ -1.76
UBE2F-222	ENST00000482096	PSMB2	P49721	201 aa		4.03	□□□□□ -1.76
UBE2F-222	ENST00000482096	RBM3	P98179	157 aa	Known RBP	4.03	□□□□□ -1.76
UBE2F-222	ENST00000482096	NDUFB1	O75438	58 aa		4.02	□□□□□ -1.77
UBE2F-222	ENST00000482096	DSCR8	Q96T75	97 aa		4.02	□□□□□ -1.77
UBE2F-222	ENST00000482096	VAMP8	Q9BV40	100 aa		4.02	□□□□□ -1.77
UBE2F-222	ENST00000482096	C8orf17	Q9NRJ1	99 aa		4.01	□□□□□ -1.77
UBE2F-222	ENST00000482096		K7ERJ3	54 aa		4	□□□□□ -1.77
UBE2F-222	ENST00000482096	S100A1	P23297	94 aa		4	□□□□□ -1.77
UBE2F-222	ENST00000482096	H1FX-AS1	Q4G0G2	97 aa		4	□□□□□ -1.77
UBE2F-222	ENST00000482096	LYRM7	Q5U5X0	104 aa		4	□□□□□ -1.77
UBE2F-222	ENST00000482096		Q6ZQT0	140 aa		4	□□□□□ -1.77
UBE2F-222	ENST00000482096		C9JAW5	83 aa		3.99	□□□□□ -1.77
UBE2F-222	ENST00000482096	IGKV3D-7	A0A0C4DH55	119 aa		3.98	□□□□□ -1.77
UBE2F-222	ENST00000482096	HSD52	Q0P140	79 aa		3.98	□□□□□ -1.77
UBE2F-222	ENST00000482096		Q6ZVQ6	151 aa		3.97	□□□□□ -1.77
UBE2F-222	ENST00000482096	BAALC-AS2	P0C853	105 aa		3.96	□□□□□ -1.78
UBE2F-222	ENST00000482096		A0A1B0GW54	56 aa		3.95	□□□□□ -1.78
UBE2F-222	ENST00000482096	SCGB1C2	P0DMR2	95 aa		3.95	□□□□□ -1.78
UBE2F-222	ENST00000482096	KRTAP10-12	P60413	245 aa		3.95	□□□□□ -1.78
UBE2F-222	ENST00000482096	LCE1E	Q5T753	118 aa		3.95	□□□□□ -1.78
UBE2F-222	ENST00000482096	PRR15	Q8IV56	129 aa		3.94	□□□□□ -1.78
UBE2F-222	ENST00000482096		A6NN06	94 aa		3.93	□□□□□ -1.78
UBE2F-222	ENST00000482096	TMEM254	Q8TBM7	123 aa		3.93	□□□□□ -1.78
UBE2F-222	ENST00000482096	MRPL34	Q9BQ48	92 aa	Known RBP	3.93	□□□□□ -1.78
UBE2F-222	ENST00000482096	NEB	P20929	6669 aa		3.93	□□□□□ -1.78
UBE2F-222	ENST00000482096	LOC110117498	A0A087WWA1	95 aa		3.91	□□□□□ -1.78
UBE2F-222	ENST00000482096	MMP24-AS1	A0A0U1RRL7	71 aa		3.91	□□□□□ -1.78
UBE2F-222	ENST00000482096	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.91	□□□□□ -1.78
UBE2F-222	ENST00000482096	MT1B	P07438	61 aa		3.9	□□□□□ -1.79
UBE2F-222	ENST00000482096	PDE6G	P18545	87 aa		3.9	□□□□□ -1.79
UBE2F-222	ENST00000482096	KRTAP20-1	Q3LI63	56 aa		3.9	□□□□□ -1.79
UBE2F-222	ENST00000482096	KRTAP5-11	Q6L8G4	156 aa		3.9	□□□□□ -1.79
UBE2F-222	ENST00000482096	hDV103S1	A0JD37	113 aa		3.89	□□□□□ -1.79
UBE2F-222	ENST00000482096	NREP	Q16612	68 aa		3.89	□□□□□ -1.79
UBE2F-222	ENST00000482096	PYY3	Q5JQD4	70 aa		3.89	□□□□□ -1.79
UBE2F-222	ENST00000482096	NDUFS5	O43920	106 aa		3.88	□□□□□ -1.79
UBE2F-222	ENST00000482096	KRTAP10-5	P60370	271 aa		3.88	□□□□□ -1.79
UBE2F-222	ENST00000482096	C7orf65	Q6ZTY9	151 aa		3.88	□□□□□ -1.79
UBE2F-222	ENST00000482096	MUC12	Q9UKN1	5478 aa		3.88	□□□□□ -1.79
UBE2F-222	ENST00000482096	KRTAP19-8	Q3LI54	63 aa		3.87	□□□□□ -1.79
UBE2F-222	ENST00000482096		Q5VV11	94 aa		3.87	□□□□□ -1.79
UBE2F-222	ENST00000482096		Q5W150	140 aa		3.87	□□□□□ -1.79
UBE2F-222	ENST00000482096	UQCR10	Q9UDW1	63 aa		3.87	□□□□□ -1.79
UBE2F-222	ENST00000482096	KRTAP5-9	P26371	169 aa		3.86	□□□□□ -1.79
UBE2F-222	ENST00000482096	ATXN8	Q156A1	80 aa		3.86	□□□□□ -1.79
UBE2F-222	ENST00000482096	SPRR2G	Q9BYE4	73 aa		3.86	□□□□□ -1.79
UBE2F-222	ENST00000482096	C14orf132	Q9NPU4	83 aa		3.86	□□□□□ -1.79
UBE2F-222	ENST00000482096	FAM236A	A0A1B0GUQ0	79 aa		3.85	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms