RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
HPS4-212ENST00000481910 A6NED7 52 aa7.1□□□□□ -1.27
HPS4-212ENST00000481910 BPY2O14599 106 aa7.1□□□□□ -1.27
HPS4-212ENST00000481910 SEC61BP60468 96 aaKnown RBP7.1□□□□□ -1.27
HPS4-212ENST00000481910 IGLV7-43P04211 117 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 SPRR1AP35321 89 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 A8MU10 97 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 NDUFB1O75438 58 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 KRTAP10-4P60372 401 aaPredicted RBP7.09□□□□□ -1.27
HPS4-212ENST00000481910 Q8N9P0 234 aaPredicted RBP7.09□□□□□ -1.27
HPS4-212ENST00000481910 SMIM11BQ8TCY0 68 aa7.09□□□□□ -1.27
HPS4-212ENST00000481910 CASC2Q6XLA1 102 aa7.08□□□□□ -1.28
HPS4-212ENST00000481910 FAM218AQ96MZ4 157 aa7.08□□□□□ -1.28
HPS4-212ENST00000481910 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
HPS4-212ENST00000481910 PRLHP81277 87 aa7.07□□□□□ -1.28
HPS4-212ENST00000481910 OCR1Q9BZK8 76 aa7.07□□□□□ -1.28
HPS4-212ENST00000481910 BIRC6Q9NR09 4857 aa7.06□□□□□ -1.28
HPS4-212ENST00000481910 ZNF861PO60384 105 aa7.06□□□□□ -1.28
HPS4-212ENST00000481910 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
HPS4-212ENST00000481910 Q6ZRX8 168 aa7.05□□□□□ -1.28
HPS4-212ENST00000481910 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
HPS4-212ENST00000481910 H3BQ85 93 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 HIGD2AQ9BW72 106 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 RYR1P21817 5038 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 HSPG2P98160 4391 aa7.04□□□□□ -1.28
HPS4-212ENST00000481910 COX7BP24311 80 aa7.03□□□□□ -1.28
HPS4-212ENST00000481910 SPINK6Q6UWN8 80 aa7.03□□□□□ -1.28
HPS4-212ENST00000481910 Q9BRP9 147 aa7.03□□□□□ -1.28
HPS4-212ENST00000481910 PRR15LQ9BU68 103 aa7.02□□□□□ -1.29
HPS4-212ENST00000481910 ZCCHC13Q8WW36 166 aaKnown RBP7□□□□□ -1.29
HPS4-212ENST00000481910 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
HPS4-212ENST00000481910 SRRM2Q9UQ35 2752 aaKnown RBP6.99□□□□□ -1.29
HPS4-212ENST00000481910 FAT1Q14517 4588 aa6.99□□□□□ -1.29
HPS4-212ENST00000481910 LCE2CQ5TA81 110 aa6.97□□□□□ -1.29
HPS4-212ENST00000481910 LINC00575Q6W349 94 aa6.97□□□□□ -1.29
HPS4-212ENST00000481910 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
HPS4-212ENST00000481910 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
HPS4-212ENST00000481910 Q6ZQT0 140 aa6.96□□□□□ -1.3
HPS4-212ENST00000481910 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
HPS4-212ENST00000481910 ST20-AS1Q8NBB2 130 aa6.93□□□□□ -1.3
HPS4-212ENST00000481910 XP32Q5T750 250 aa6.93□□□□□ -1.3
HPS4-212ENST00000481910 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
HPS4-212ENST00000481910 KRTAP4-8Q9BYQ9 185 aa6.93□□□□□ -1.3
HPS4-212ENST00000481910 FLG2Q5D862 2391 aaPredicted RBP6.93□□□□□ -1.3
HPS4-212ENST00000481910 KRTAP1-4P0C5Y4 121 aa6.92□□□□□ -1.3
HPS4-212ENST00000481910 ANAPC11Q9NYG5 84 aa6.92□□□□□ -1.3
HPS4-212ENST00000481910 DEFB105AQ8NG35 78 aa6.91□□□□□ -1.3
HPS4-212ENST00000481910 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
HPS4-212ENST00000481910 LINC00208Q96KT6 92 aa6.91□□□□□ -1.3
HPS4-212ENST00000481910 Q6ZQY7 126 aa6.91□□□□□ -1.3
HPS4-212ENST00000481910 LINC01558Q9Y6Z2 57 aa6.91□□□□□ -1.3
HPS4-212ENST00000481910 HERC2O95714 4834 aa6.9□□□□□ -1.31
HPS4-212ENST00000481910 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.89□□□□□ -1.31
HPS4-212ENST00000481910 ROMO1P60602 79 aa6.88□□□□□ -1.31
HPS4-212ENST00000481910 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
HPS4-212ENST00000481910 IGLV5-48A0A075B6I7 105 aa6.87□□□□□ -1.31
HPS4-212ENST00000481910 SPRR1BP22528 89 aa6.86□□□□□ -1.31
HPS4-212ENST00000481910 Q8N377 158 aa6.86□□□□□ -1.31
HPS4-212ENST00000481910 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
HPS4-212ENST00000481910 IGLV9-49A0A0B4J1Y8 123 aa6.84□□□□□ -1.32
HPS4-212ENST00000481910 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.32
HPS4-212ENST00000481910 H3BPC8 53 aa6.83□□□□□ -1.32
HPS4-212ENST00000481910 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
HPS4-212ENST00000481910 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
HPS4-212ENST00000481910 SMIM29Q86T20 159 aa6.82□□□□□ -1.32
HPS4-212ENST00000481910 TYMSOSQ8TAI1 123 aa6.82□□□□□ -1.32
HPS4-212ENST00000481910 KRTAP10-8P60410 259 aa6.81□□□□□ -1.32
HPS4-212ENST00000481910 MT1HL1P0DM35 61 aa6.8□□□□□ -1.32
HPS4-212ENST00000481910 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
HPS4-212ENST00000481910 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
HPS4-212ENST00000481910 SSBP3-AS1Q7Z2R9 100 aa6.78□□□□□ -1.32
HPS4-212ENST00000481910 Q8NBF4 154 aa6.78□□□□□ -1.32
HPS4-212ENST00000481910 A0A1W2PNM2 257 aa6.77□□□□□ -1.33
HPS4-212ENST00000481910 KRTAP9-2Q9BYQ4 174 aa6.77□□□□□ -1.33
HPS4-212ENST00000481910 PKHD1L1Q86WI1 4243 aa6.75□□□□□ -1.33
HPS4-212ENST00000481910 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
HPS4-212ENST00000481910 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
HPS4-212ENST00000481910 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
HPS4-212ENST00000481910 KRTAP9-6A0A140TA67 174 aa6.74□□□□□ -1.33
HPS4-212ENST00000481910 LINC00304Q8N9R0 145 aa6.74□□□□□ -1.33
HPS4-212ENST00000481910 MYCBP2O75592 4640 aa6.73□□□□□ -1.33
HPS4-212ENST00000481910 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
HPS4-212ENST00000481910 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
HPS4-212ENST00000481910 A0A0G2JQZ4 141 aa6.72□□□□□ -1.33
HPS4-212ENST00000481910 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
HPS4-212ENST00000481910 PCLOQ9Y6V0 5065 aa6.72□□□□□ -1.33
HPS4-212ENST00000481910 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
HPS4-212ENST00000481910 IGFL1Q6UW32 110 aa6.7□□□□□ -1.34
HPS4-212ENST00000481910 SPINK7P58062 85 aa6.7□□□□□ -1.34
HPS4-212ENST00000481910 H0Y9P7 68 aa6.69□□□□□ -1.34
HPS4-212ENST00000481910 LORP23490 312 aaPredicted RBP6.68□□□□□ -1.34
HPS4-212ENST00000481910 SPINK1P00995 79 aa6.68□□□□□ -1.34
HPS4-212ENST00000481910 COA5Q86WW8 74 aa6.67□□□□□ -1.34
HPS4-212ENST00000481910 FAT3Q8TDW7 4589 aa6.67□□□□□ -1.34
HPS4-212ENST00000481910 A0A087WSZ3 146 aa6.66□□□□□ -1.34
HPS4-212ENST00000481910 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
HPS4-212ENST00000481910 IGLV7-46A0A075B6I9 117 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms