RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 CACFD1Q9UGQ2 172 aa-1.34□□□□□ -2.62
KDM1A-204ENST00000481879 RGPD1P0DJD0 1748 aa-1.35□□□□□ -2.62
KDM1A-204ENST00000481879 ITSN2Q9NZM3 1697 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 MED14O60244 1454 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 NCOA2Q15596 1464 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 DLEU1O43261 78 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 EEA1Q15075 1411 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 CHD1O14646 1710 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 DDX60LQ5H9U9 1706 aaKnown RBP-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 ANKRD36BQ8N2N9 1353 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 CROCC2H7BZ55 1655 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 KIF1AQ12756 1690 aa-1.35□□□□□ -2.63
KDM1A-204ENST00000481879 LTN1O94822 1766 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 D6R8Y8 96 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 SFTA3P0C7M3 94 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 PMCHL1Q16048 86 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 MUSTN1Q8IVN3 82 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 FOCADQ5VW36 1801 aa-1.36□□□□□ -2.63
KDM1A-204ENST00000481879 MYOM2P54296 1465 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 DOT1LQ8TEK3 1739 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 TRBV25-1A0A075B6N4 114 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 IQCF6A8MYZ5 107 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 MINOS1Q5TGZ0 78 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 NCBP2-AS2Q69YL0 99 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 ZFYVE16Q7Z3T8 1539 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 ABCC2Q92887 1545 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 KIF21BO75037 1637 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 CD163L1Q9NR16 1453 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 ITSN1Q15811 1721 aa-1.37□□□□□ -2.63
KDM1A-204ENST00000481879 PPLO60437 1756 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 TRAV21A0A0B4J279 112 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 UQCRHP07919 91 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 ALKAL2Q6UX46 152 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 CC2D2AQ9P2K1 1620 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 LRRIQ1Q96JM4 1722 aa-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.38□□□□□ -2.63
KDM1A-204ENST00000481879 ZC3H13Q5T200 1668 aaKnown RBP-1.39□□□□□ -2.63
KDM1A-204ENST00000481879 KIAA0586Q9BVV6 1533 aa-1.39□□□□□ -2.63
KDM1A-204ENST00000481879 A0A1B0GUT8 65 aa-1.39□□□□□ -2.63
KDM1A-204ENST00000481879 FCER1GP30273 86 aa-1.39□□□□□ -2.63
KDM1A-204ENST00000481879 XIRP2A4UGR9 3374 aa-1.39□□□□□ -2.63
KDM1A-204ENST00000481879 UTRNP46939 3433 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 GNGT2O14610 69 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 HMGN3Q15651 99 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 ETDBQ3ZM63 59 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 ACBD7Q8N6N7 88 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 C6orf48Q9UBA6 75 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 CCNB3Q8WWL7 1395 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 RAPGEF2Q9Y4G8 1499 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 THOC2Q8NI27 1593 aaKnown RBP-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 ARHGAP5Q13017 1502 aa-1.4□□□□□ -2.63
KDM1A-204ENST00000481879 C20orf78Q9BR46 151 aa-1.41□□□□□ -2.64
KDM1A-204ENST00000481879 GNG8Q9UK08 70 aa-1.41□□□□□ -2.64
KDM1A-204ENST00000481879 UBR1Q8IWV7 1749 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 ABCA3Q99758 1704 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 DEFB131BA0A096LNP1 70 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 MPC2O95563 127 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 CYB5AP00167 134 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 CRIP1P50238 77 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 POLR2KP53803 58 aaKnown RBP-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 GTF2H5Q6ZYL4 71 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 ZNF720Q7Z2F6 126 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 CLASP1Q7Z460 1538 aa-1.42□□□□□ -2.64
KDM1A-204ENST00000481879 NRXN1Q9ULB1 1477 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 NEXMIFQ5QGS0 1516 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 MRPL33O75394 65 aaKnown RBP-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 S100A8P05109 93 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 PLGLAQ15195 96 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 KAAG1Q9UBP8 84 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 NRAPQ86VF7 1730 aa-1.43□□□□□ -2.64
KDM1A-204ENST00000481879 NRXN3Q9Y4C0 1643 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 NDUFA4O00483 81 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 HMGA1P17096 107 aaKnown RBP-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 IFI27P40305 119 aaPredicted RBP-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 UACAQ9BZF9 1416 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 DIP2BQ9P265 1576 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 TJP1Q07157 1748 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 SPHKAPQ2M3C7 1700 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 MAP3K4Q9Y6R4 1608 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 ARFGEF2Q9Y6D5 1785 aa-1.44□□□□□ -2.64
KDM1A-204ENST00000481879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 RICTORQ6R327 1708 aa-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 EFCAB10A6NFE3 127 aa-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 TMEM203Q969S6 136 aa-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 ABRACLQ9P1F3 81 aa-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 PZPP20742 1482 aa-1.45□□□□□ -2.64
KDM1A-204ENST00000481879 NDUFB1O75438 58 aa-1.46□□□□□ -2.64
KDM1A-204ENST00000481879 C2orf88Q9BSF0 95 aa-1.46□□□□□ -2.64
KDM1A-204ENST00000481879 CLTCQ00610 1675 aaKnown RBP-1.46□□□□□ -2.64
KDM1A-204ENST00000481879 KIF14Q15058 1648 aa-1.47□□□□□ -2.64
KDM1A-204ENST00000481879 PREX2Q70Z35 1606 aa-1.47□□□□□ -2.64
KDM1A-204ENST00000481879 UQCRHLA0A096LP55 91 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 LINC00587B1AMM8 73 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 UMAD1C9J7I0 102 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 ATOX1O00244 68 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 LINC00032P0C843 101 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 DEFB133Q30KQ1 61 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 NRKQ7Z2Y5 1582 aa-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 GOLGB1Q14789 3259 aaKnown RBP-1.48□□□□□ -2.65
KDM1A-204ENST00000481879 HMGN2P05204 90 aaKnown RBP-1.49□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms