RNA–Protein interactions for RNA: ENST00000480989.1

GTF3C2-210, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 4

Gene GTF3C2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-210ENST00000480989 COX8AP10176 69 aa4.59□□□□□ -1.67
GTF3C2-210ENST00000480989 KRTAP10-10P60014 251 aa4.59□□□□□ -1.67
GTF3C2-210ENST00000480989 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
GTF3C2-210ENST00000480989 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
GTF3C2-210ENST00000480989 HIST1H4GQ99525 98 aa4.58□□□□□ -1.68
GTF3C2-210ENST00000480989 TRBV20-1A0A075B6N2 111 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 A0A087WSZ3 146 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 KRTAP19-6Q3LI70 58 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 PPDPFLQ8WWR9 84 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 FAM218AQ96MZ4 157 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 HIGD1BQ9P298 99 aa4.57□□□□□ -1.68
GTF3C2-210ENST00000480989 VAMP8Q9BV40 100 aa4.56□□□□□ -1.68
GTF3C2-210ENST00000480989 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
GTF3C2-210ENST00000480989 SPATA45Q537H7 98 aa4.55□□□□□ -1.68
GTF3C2-210ENST00000480989 GTF2H5Q6ZYL4 71 aa4.55□□□□□ -1.68
GTF3C2-210ENST00000480989 BVES-AS1Q5T3Y7 98 aa4.54□□□□□ -1.68
GTF3C2-210ENST00000480989 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
GTF3C2-210ENST00000480989 ANAPC13Q9BS18 74 aa4.54□□□□□ -1.68
GTF3C2-210ENST00000480989 FAM236DA0A1B0GTK5 79 aa4.53□□□□□ -1.68
GTF3C2-210ENST00000480989 J3QR89 54 aa4.53□□□□□ -1.68
GTF3C2-210ENST00000480989 SNCGO76070 127 aa4.53□□□□□ -1.68
GTF3C2-210ENST00000480989 FAM236CP0DP71 79 aa4.53□□□□□ -1.68
GTF3C2-210ENST00000480989 NDUFV3P56181 108 aaKnown RBP4.52□□□□□ -1.69
GTF3C2-210ENST00000480989 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
GTF3C2-210ENST00000480989 RAB37Q96AX2 223 aa4.52□□□□□ -1.69
GTF3C2-210ENST00000480989 A0A0B4J2C4 111 aa4.51□□□□□ -1.69
GTF3C2-210ENST00000480989 HSD52Q0P140 79 aa4.51□□□□□ -1.69
GTF3C2-210ENST00000480989 Q6ZVQ6 151 aa4.51□□□□□ -1.69
GTF3C2-210ENST00000480989 H0YGX0 51 aa4.5□□□□□ -1.69
GTF3C2-210ENST00000480989 C9JAW5 83 aa4.49□□□□□ -1.69
GTF3C2-210ENST00000480989 LINC00313P59037 77 aa4.49□□□□□ -1.69
GTF3C2-210ENST00000480989 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
GTF3C2-210ENST00000480989 CEND1Q8N111 149 aa4.49□□□□□ -1.69
GTF3C2-210ENST00000480989 H3BMG7 143 aa4.48□□□□□ -1.69
GTF3C2-210ENST00000480989 DEFB116Q30KQ4 102 aa4.48□□□□□ -1.69
GTF3C2-210ENST00000480989 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
GTF3C2-210ENST00000480989 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
GTF3C2-210ENST00000480989 KRTAP6-3Q3LI67 103 aa4.47□□□□□ -1.69
GTF3C2-210ENST00000480989 LINC00472Q9H8W2 130 aa4.47□□□□□ -1.69
GTF3C2-210ENST00000480989 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
GTF3C2-210ENST00000480989 FAM240AA0A1B0GVK7 77 aa4.46□□□□□ -1.7
GTF3C2-210ENST00000480989 FXYD2P54710 66 aa4.45□□□□□ -1.7
GTF3C2-210ENST00000480989 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
GTF3C2-210ENST00000480989 BATFQ16520 125 aa4.45□□□□□ -1.7
GTF3C2-210ENST00000480989 UQCR10Q9UDW1 63 aa4.44□□□□□ -1.7
GTF3C2-210ENST00000480989 TRBV7-4A0A0J9YYF1 115 aa4.43□□□□□ -1.7
GTF3C2-210ENST00000480989 H3BQ85 93 aa4.43□□□□□ -1.7
GTF3C2-210ENST00000480989 FABP2P12104 132 aa4.43□□□□□ -1.7
GTF3C2-210ENST00000480989 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
GTF3C2-210ENST00000480989 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
GTF3C2-210ENST00000480989 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
GTF3C2-210ENST00000480989 COX6CP09669 75 aa4.42□□□□□ -1.7
GTF3C2-210ENST00000480989 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
GTF3C2-210ENST00000480989 SPINK7P58062 85 aa4.41□□□□□ -1.7
GTF3C2-210ENST00000480989 DNAL4O96015 105 aa4.4□□□□□ -1.71
GTF3C2-210ENST00000480989 ZCCHC13Q8WW36 166 aaKnown RBP4.4□□□□□ -1.71
GTF3C2-210ENST00000480989 PSMB2P49721 201 aa4.39□□□□□ -1.71
GTF3C2-210ENST00000480989 ANKRD29Q8N6D5 301 aa4.39□□□□□ -1.71
GTF3C2-210ENST00000480989 LINC00846Q9NV44 126 aa4.39□□□□□ -1.71
GTF3C2-210ENST00000480989 NEBP20929 6669 aa4.38□□□□□ -1.71
GTF3C2-210ENST00000480989 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
GTF3C2-210ENST00000480989 A0A1B0GVX0 72 aa4.38□□□□□ -1.71
GTF3C2-210ENST00000480989 A8MWP4 228 aa4.38□□□□□ -1.71
GTF3C2-210ENST00000480989 ORMDL1Q9P0S3 153 aa4.38□□□□□ -1.71
GTF3C2-210ENST00000480989 TMEM256-PLSCR3K7ERE1 68 aa4.37□□□□□ -1.71
GTF3C2-210ENST00000480989 CCKP06307 115 aa4.37□□□□□ -1.71
GTF3C2-210ENST00000480989 LYRM7Q5U5X0 104 aa4.37□□□□□ -1.71
GTF3C2-210ENST00000480989 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
GTF3C2-210ENST00000480989 C8orf87E5RJ46 101 aa4.36□□□□□ -1.71
GTF3C2-210ENST00000480989 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
GTF3C2-210ENST00000480989 K7ERJ3 54 aa4.36□□□□□ -1.71
GTF3C2-210ENST00000480989 NAA38Q9BRA0 125 aaKnown RBP4.36□□□□□ -1.71
GTF3C2-210ENST00000480989 TRACP01848 142 aa4.35□□□□□ -1.71
GTF3C2-210ENST00000480989 SCGB1C2P0DMR2 95 aa4.35□□□□□ -1.71
GTF3C2-210ENST00000480989 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
GTF3C2-210ENST00000480989 K7EP34 96 aa4.32□□□□□ -1.72
GTF3C2-210ENST00000480989 TMEM258P61165 79 aa4.31□□□□□ -1.72
GTF3C2-210ENST00000480989 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
GTF3C2-210ENST00000480989 LCE5AQ5TCM9 118 aa4.3□□□□□ -1.72
GTF3C2-210ENST00000480989 MT1BP07438 61 aa4.29□□□□□ -1.72
GTF3C2-210ENST00000480989 RBM3P98179 157 aaKnown RBP4.29□□□□□ -1.72
GTF3C2-210ENST00000480989 DSCR8Q96T75 97 aa4.29□□□□□ -1.72
GTF3C2-210ENST00000480989 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 BAALC-AS2P0C853 105 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 ATXN8Q156A1 80 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 PRR15Q8IV56 129 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 C8orf17Q9NRJ1 99 aa4.28□□□□□ -1.72
GTF3C2-210ENST00000480989 IGKV3D-7A0A0C4DH55 119 aa4.27□□□□□ -1.73
GTF3C2-210ENST00000480989 Q6ZQT0 140 aa4.27□□□□□ -1.73
GTF3C2-210ENST00000480989 F8W1H4 67 aa4.26□□□□□ -1.73
GTF3C2-210ENST00000480989 UQCRQO14949 82 aa4.26□□□□□ -1.73
GTF3C2-210ENST00000480989 A0A1B0GW54 56 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 PDE6GP18545 87 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 H1FX-AS1Q4G0G2 97 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 KRTAP4-11Q9BYQ6 195 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
GTF3C2-210ENST00000480989 NDUFS5O43920 106 aa4.24□□□□□ -1.73
GTF3C2-210ENST00000480989 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms