RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 SCGB1C2P0DMR2 95 aa6.51□□□□□ -1.37
NDC1-202ENST00000480952 FABP2P12104 132 aa6.49□□□□□ -1.37
NDC1-202ENST00000480952 MTURNQ8N3F0 131 aa6.49□□□□□ -1.37
NDC1-202ENST00000480952 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
NDC1-202ENST00000480952 NOTCH2NLQ7Z3S9 236 aa6.48□□□□□ -1.37
NDC1-202ENST00000480952 NDUFV3P56181 108 aaKnown RBP6.47□□□□□ -1.37
NDC1-202ENST00000480952 LINC00313P59037 77 aa6.47□□□□□ -1.37
NDC1-202ENST00000480952 BATFQ16520 125 aa6.47□□□□□ -1.37
NDC1-202ENST00000480952 ORMDL1Q9P0S3 153 aa6.47□□□□□ -1.37
NDC1-202ENST00000480952 A0A087WSZ3 146 aa6.45□□□□□ -1.38
NDC1-202ENST00000480952 H3BQ85 93 aa6.45□□□□□ -1.38
NDC1-202ENST00000480952 TEN1Q86WV5 123 aa6.45□□□□□ -1.38
NDC1-202ENST00000480952 H3BMG7 143 aa6.44□□□□□ -1.38
NDC1-202ENST00000480952 SIGMAR1Q99720 223 aa6.44□□□□□ -1.38
NDC1-202ENST00000480952 A8MWP4 228 aa6.43□□□□□ -1.38
NDC1-202ENST00000480952 TMEM256-PLSCR3K7ERE1 68 aa6.43□□□□□ -1.38
NDC1-202ENST00000480952 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
NDC1-202ENST00000480952 NAA38Q9BRA0 125 aaKnown RBP6.43□□□□□ -1.38
NDC1-202ENST00000480952 TRACP01848 142 aa6.42□□□□□ -1.38
NDC1-202ENST00000480952 KRTAP20-1Q3LI63 56 aa6.42□□□□□ -1.38
NDC1-202ENST00000480952 A0A1B0GV72 72 aa6.41□□□□□ -1.38
NDC1-202ENST00000480952 LYRM7Q5U5X0 104 aa6.4□□□□□ -1.38
NDC1-202ENST00000480952 ATXN8Q156A1 80 aa6.39□□□□□ -1.39
NDC1-202ENST00000480952 UBE2V1Q13404 147 aa6.38□□□□□ -1.39
NDC1-202ENST00000480952 ANKRD29Q8N6D5 301 aa6.38□□□□□ -1.39
NDC1-202ENST00000480952 IGKV4-1P06312 121 aa6.37□□□□□ -1.39
NDC1-202ENST00000480952 BAALC-AS2P0C853 105 aa6.36□□□□□ -1.39
NDC1-202ENST00000480952 C9orf118A6NHY6 69 aa6.33□□□□□ -1.4
NDC1-202ENST00000480952 SPINK7P58062 85 aa6.33□□□□□ -1.4
NDC1-202ENST00000480952 RBM3P98179 157 aaKnown RBP6.33□□□□□ -1.4
NDC1-202ENST00000480952 DSCR8Q96T75 97 aa6.33□□□□□ -1.4
NDC1-202ENST00000480952 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
NDC1-202ENST00000480952 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
NDC1-202ENST00000480952 TAX1BP3O14907 124 aa6.32□□□□□ -1.4
NDC1-202ENST00000480952 CCKP06307 115 aa6.32□□□□□ -1.4
NDC1-202ENST00000480952 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
NDC1-202ENST00000480952 TRBV7-4A0A0J9YYF1 115 aa6.31□□□□□ -1.4
NDC1-202ENST00000480952 A0A1W2PPM0 123 aa6.31□□□□□ -1.4
NDC1-202ENST00000480952 C9JAW5 83 aa6.3□□□□□ -1.4
NDC1-202ENST00000480952 DEFB116Q30KQ4 102 aa6.3□□□□□ -1.4
NDC1-202ENST00000480952 PCP4L1A6NKN8 68 aa6.29□□□□□ -1.4
NDC1-202ENST00000480952 JMJD7-PLA2G4BH0Y9G9 81 aa6.28□□□□□ -1.4
NDC1-202ENST00000480952 COL5A1-AS1Q5SY13 56 aa6.28□□□□□ -1.4
NDC1-202ENST00000480952 ZCCHC13Q8WW36 166 aaKnown RBP6.28□□□□□ -1.4
NDC1-202ENST00000480952 C21orf62-AS1Q17RA5 79 aa6.27□□□□□ -1.41
NDC1-202ENST00000480952 A6NN06 94 aa6.25□□□□□ -1.41
NDC1-202ENST00000480952 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
NDC1-202ENST00000480952 SPCS1Q9Y6A9 102 aa6.25□□□□□ -1.41
NDC1-202ENST00000480952 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
NDC1-202ENST00000480952 LINC00472Q9H8W2 130 aa6.24□□□□□ -1.41
NDC1-202ENST00000480952 C8orf87E5RJ46 101 aa6.23□□□□□ -1.41
NDC1-202ENST00000480952 H3BT86 120 aa6.23□□□□□ -1.41
NDC1-202ENST00000480952 PDE6GP18545 87 aa6.22□□□□□ -1.41
NDC1-202ENST00000480952 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
NDC1-202ENST00000480952 LOC110117498A0A087WWA1 95 aa6.21□□□□□ -1.42
NDC1-202ENST00000480952 Q6ZQT0 140 aa6.21□□□□□ -1.42
NDC1-202ENST00000480952 A0A1B0GVX0 72 aa6.2□□□□□ -1.42
NDC1-202ENST00000480952 KMT2DO14686 5537 aa6.2□□□□□ -1.42
NDC1-202ENST00000480952 A0A1B0GW54 56 aa6.17□□□□□ -1.42
NDC1-202ENST00000480952 K7EP34 96 aa6.16□□□□□ -1.42
NDC1-202ENST00000480952 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
NDC1-202ENST00000480952 H1FX-AS1Q4G0G2 97 aa6.15□□□□□ -1.42
NDC1-202ENST00000480952 J3KT08 172 aa6.14□□□□□ -1.43
NDC1-202ENST00000480952 GTF2H5Q6ZYL4 71 aa6.14□□□□□ -1.43
NDC1-202ENST00000480952 KRTAP2-3P0C7H8 128 aa6.13□□□□□ -1.43
NDC1-202ENST00000480952 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
NDC1-202ENST00000480952 KRTAP2-4Q9BYR9 128 aa6.13□□□□□ -1.43
NDC1-202ENST00000480952 NREPQ16612 68 aa6.12□□□□□ -1.43
NDC1-202ENST00000480952 NDUFB1O75438 58 aa6.11□□□□□ -1.43
NDC1-202ENST00000480952 Q5VV11 94 aa6.09□□□□□ -1.43
NDC1-202ENST00000480952 PRO0461Q9UI25 63 aa6.09□□□□□ -1.43
NDC1-202ENST00000480952 MT1BP07438 61 aa6.08□□□□□ -1.44
NDC1-202ENST00000480952 IGKV3D-7A0A0C4DH55 119 aa6.06□□□□□ -1.44
NDC1-202ENST00000480952 F8W1H4 67 aa6.06□□□□□ -1.44
NDC1-202ENST00000480952 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
NDC1-202ENST00000480952 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
NDC1-202ENST00000480952 FAM236AA0A1B0GUQ0 79 aa6.04□□□□□ -1.44
NDC1-202ENST00000480952 FAM236BA0A1B0GV22 79 aa6.04□□□□□ -1.44
NDC1-202ENST00000480952 BPY2O14599 106 aa6.03□□□□□ -1.44
NDC1-202ENST00000480952 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
NDC1-202ENST00000480952 C8orf17Q9NRJ1 99 aa6.02□□□□□ -1.45
NDC1-202ENST00000480952 ETDBQ3ZM63 59 aa6.01□□□□□ -1.45
NDC1-202ENST00000480952 Q6ZVQ6 151 aa6.01□□□□□ -1.45
NDC1-202ENST00000480952 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
NDC1-202ENST00000480952 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
NDC1-202ENST00000480952 UBL5Q9BZL1 73 aa6□□□□□ -1.45
NDC1-202ENST00000480952 K7EQZ3 153 aa5.98□□□□□ -1.45
NDC1-202ENST00000480952 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
NDC1-202ENST00000480952 MMP24-AS1A0A0U1RRL7 71 aa5.95□□□□□ -1.46
NDC1-202ENST00000480952 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
NDC1-202ENST00000480952 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
NDC1-202ENST00000480952 Q8N9L7 120 aa5.94□□□□□ -1.46
NDC1-202ENST00000480952 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
NDC1-202ENST00000480952 MRPL34Q9BQ48 92 aaKnown RBP5.94□□□□□ -1.46
NDC1-202ENST00000480952 NDUFS5O43920 106 aa5.93□□□□□ -1.46
NDC1-202ENST00000480952 SPRR2EP22531 72 aa5.93□□□□□ -1.46
NDC1-202ENST00000480952 SPRR2BP35325 72 aa5.93□□□□□ -1.46
NDC1-202ENST00000480952 SPRR2AP35326 72 aa5.93□□□□□ -1.46
NDC1-202ENST00000480952 IMUPQ9GZP8 106 aa5.93□□□□□ -1.46
NDC1-202ENST00000480952 IGKV2D-30A0A075B6S6 120 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms