RNA–Protein interactions for RNA: ENST00000480894.1

RGPD6-209, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 2

Gene RGPD6, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-209ENST00000480894 H0YAA0 97 aa-0.92□□□□□ -2.56
RGPD6-209ENST00000480894 LRBAP50851 2863 aa-0.92□□□□□ -2.56
RGPD6-209ENST00000480894 PLXNC1O60486 1568 aa-0.92□□□□□ -2.56
RGPD6-209ENST00000480894 DIP2BQ9P265 1576 aa-0.92□□□□□ -2.56
RGPD6-209ENST00000480894 CCDC88BA6NC98 1476 aa-0.92□□□□□ -2.56
RGPD6-209ENST00000480894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.93□□□□□ -2.56
RGPD6-209ENST00000480894 SPENQ96T58 3664 aaKnown RBP-0.93□□□□□ -2.56
RGPD6-209ENST00000480894 S4R3F8 94 aa-0.93□□□□□ -2.56
RGPD6-209ENST00000480894 MGAQ8IWI9 3026 aa-0.93□□□□□ -2.56
RGPD6-209ENST00000480894 CEP295Q9C0D2 2601 aa-0.94□□□□□ -2.56
RGPD6-209ENST00000480894 SMARCA2P51531 1590 aa-0.94□□□□□ -2.56
RGPD6-209ENST00000480894 SMR3BP02814 79 aaPredicted RBP-0.94□□□□□ -2.56
RGPD6-209ENST00000480894 MED14O60244 1454 aa-0.94□□□□□ -2.56
RGPD6-209ENST00000480894 NDUFA4O00483 81 aa-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 MT1XP80297 61 aa-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 NREPQ16612 68 aa-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 ITPR1Q14643 2758 aa-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 SMG1Q96Q15 3661 aaKnown RBP-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 MYO9AB2RTY4 2548 aa-0.95□□□□□ -2.56
RGPD6-209ENST00000480894 DMXL2Q8TDJ6 3036 aa-0.96□□□□□ -2.56
RGPD6-209ENST00000480894 A0A087WXM4 84 aa-0.96□□□□□ -2.56
RGPD6-209ENST00000480894 C9orf92A6NGG3 77 aa-0.96□□□□□ -2.56
RGPD6-209ENST00000480894 HMGA1P17096 107 aaKnown RBP-0.96□□□□□ -2.56
RGPD6-209ENST00000480894 SPTAN1Q13813 2472 aaKnown RBP-0.96□□□□□ -2.56
RGPD6-209ENST00000480894 ANKRD50Q9ULJ7 1429 aa-0.97□□□□□ -2.56
RGPD6-209ENST00000480894 DEFA5Q01523 94 aa-0.97□□□□□ -2.56
RGPD6-209ENST00000480894 RB1CC1Q8TDY2 1594 aa-0.97□□□□□ -2.56
RGPD6-209ENST00000480894 H3BUT2 72 aa-0.98□□□□□ -2.57
RGPD6-209ENST00000480894 SMIM13P0DJ93 91 aa-0.98□□□□□ -2.57
RGPD6-209ENST00000480894 DEPDC5O75140 1603 aa-0.99□□□□□ -2.57
RGPD6-209ENST00000480894 LYNX1G3V0Z9 82 aa-0.99□□□□□ -2.57
RGPD6-209ENST00000480894 DEFB1P60022 68 aa-0.99□□□□□ -2.57
RGPD6-209ENST00000480894 DEFB110Q30KQ9 67 aa-0.99□□□□□ -2.57
RGPD6-209ENST00000480894 CFAP46Q8IYW2 2715 aa-1□□□□□ -2.57
RGPD6-209ENST00000480894 PRLHP81277 87 aa-1□□□□□ -2.57
RGPD6-209ENST00000480894 DEFB130BP0DP73 79 aa-1.01□□□□□ -2.57
RGPD6-209ENST00000480894 DEFB130AP0DP74 79 aa-1.01□□□□□ -2.57
RGPD6-209ENST00000480894 MT1GP13640 62 aa-1.02□□□□□ -2.57
RGPD6-209ENST00000480894 MT1EP04732 61 aa-1.03□□□□□ -2.57
RGPD6-209ENST00000480894 BVES-AS1Q5T3Y7 98 aa-1.03□□□□□ -2.57
RGPD6-209ENST00000480894 CCDC18Q5T9S5 1454 aa-1.04□□□□□ -2.58
RGPD6-209ENST00000480894 KRTAP8-1Q8IUC2 63 aa-1.04□□□□□ -2.58
RGPD6-209ENST00000480894 ATMQ13315 3056 aa-1.04□□□□□ -2.58
RGPD6-209ENST00000480894 ERVK-7P63135 1459 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 CRYBG3Q68DQ2 2970 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 DEFB106AQ8N104 65 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 CFAP54Q96N23 3096 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 ABCC1P33527 1531 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 DCAF1Q9Y4B6 1507 aa-1.05□□□□□ -2.58
RGPD6-209ENST00000480894 DDX60LQ5H9U9 1706 aaKnown RBP-1.06□□□□□ -2.58
RGPD6-209ENST00000480894 DEFB131BA0A096LNP1 70 aa-1.06□□□□□ -2.58
RGPD6-209ENST00000480894 IAPPP10997 89 aa-1.06□□□□□ -2.58
RGPD6-209ENST00000480894 MT1LQ93083 61 aa-1.06□□□□□ -2.58
RGPD6-209ENST00000480894 CSMD2Q7Z408 3487 aa-1.07□□□□□ -2.58
RGPD6-209ENST00000480894 PLCH1Q4KWH8 1693 aa-1.07□□□□□ -2.58
RGPD6-209ENST00000480894 PRUNE2Q8WUY3 3088 aa-1.08□□□□□ -2.58
RGPD6-209ENST00000480894 CDC42BPAQ5VT25 1732 aa-1.08□□□□□ -2.58
RGPD6-209ENST00000480894 ITSN2Q9NZM3 1697 aa-1.08□□□□□ -2.58
RGPD6-209ENST00000480894 ANKRD36CQ5JPF3 1778 aa-1.08□□□□□ -2.58
RGPD6-209ENST00000480894 MT1HL1P0DM35 61 aa-1.09□□□□□ -2.58
RGPD6-209ENST00000480894 KDM5DQ9BY66 1539 aa-1.1□□□□□ -2.58
RGPD6-209ENST00000480894 BOD1L1Q8NFC6 3051 aa-1.1□□□□□ -2.59
RGPD6-209ENST00000480894 TOGARAM1Q9Y4F4 1720 aa-1.1□□□□□ -2.59
RGPD6-209ENST00000480894 CFAP43Q8NDM7 1665 aa-1.1□□□□□ -2.59
RGPD6-209ENST00000480894 FREM2Q5SZK8 3169 aa-1.11□□□□□ -2.59
RGPD6-209ENST00000480894 PARP4Q9UKK3 1724 aaKnown RBP-1.11□□□□□ -2.59
RGPD6-209ENST00000480894 MRPL33O75394 65 aaKnown RBP-1.11□□□□□ -2.59
RGPD6-209ENST00000480894 NCBP2-AS2Q69YL0 99 aa-1.11□□□□□ -2.59
RGPD6-209ENST00000480894 C18orf32Q8TCD1 76 aa-1.11□□□□□ -2.59
RGPD6-209ENST00000480894 ITPR2Q14571 2701 aa-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 RPS27P42677 84 aaKnown RBP-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 RPS27LQ71UM5 84 aaKnown RBP-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 MT1MQ8N339 61 aa-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 RICTORQ6R327 1708 aa-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 MYO15AQ9UKN7 3530 aa-1.12□□□□□ -2.59
RGPD6-209ENST00000480894 TLN1Q9Y490 2541 aaKnown RBP-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 IGLV5-48A0A075B6I7 105 aa-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 MT2AP02795 61 aa-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 CDC42BPGQ6DT37 1551 aa-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 MAST1Q9Y2H9 1570 aa-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 ZC3H13Q5T200 1668 aaKnown RBP-1.13□□□□□ -2.59
RGPD6-209ENST00000480894 ASXL1Q8IXJ9 1541 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 RNF17Q9BXT8 1623 aaKnown RBP-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 TJP1Q07157 1748 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 CRIP1P50238 77 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 CLPSL2Q6UWE3 100 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 KCNQ1DNQ9H478 68 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 ARHGAP35Q9NRY4 1499 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 VPS13CQ709C8 3753 aa-1.14□□□□□ -2.59
RGPD6-209ENST00000480894 LY75O60449 1722 aa-1.15□□□□□ -2.59
RGPD6-209ENST00000480894 CFAP74Q9C0B2 1584 aa-1.15□□□□□ -2.59
RGPD6-209ENST00000480894 CD163L1Q9NR16 1453 aa-1.15□□□□□ -2.59
RGPD6-209ENST00000480894 MMP24-AS1A0A0U1RRL7 71 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 TNP1P09430 55 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 WT1-ASQ06250 92 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 UBL5Q9BZL1 73 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 ITSN1Q15811 1721 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 ZFHX4Q86UP3 3567 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 KIF1AQ12756 1690 aa-1.16□□□□□ -2.6
RGPD6-209ENST00000480894 MT1BP07438 61 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms