RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 SS18L2Q9UHA2 77 aa5.62□□□□□ -1.51
TTC28-206ENST00000480563 C9orf118A6NHY6 69 aa5.61□□□□□ -1.51
TTC28-206ENST00000480563 A0A1B0GV72 72 aa5.6□□□□□ -1.51
TTC28-206ENST00000480563 TEN1Q86WV5 123 aa5.6□□□□□ -1.51
TTC28-206ENST00000480563 ANKRD29Q8N6D5 301 aa5.6□□□□□ -1.51
TTC28-206ENST00000480563 BAALC-AS2P0C853 105 aa5.59□□□□□ -1.51
TTC28-206ENST00000480563 COL5A1-AS1Q5SY13 56 aa5.59□□□□□ -1.51
TTC28-206ENST00000480563 A0A1W2PPM0 123 aa5.58□□□□□ -1.52
TTC28-206ENST00000480563 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
TTC28-206ENST00000480563 DSCR8Q96T75 97 aa5.58□□□□□ -1.52
TTC28-206ENST00000480563 PCP4L1A6NKN8 68 aa5.57□□□□□ -1.52
TTC28-206ENST00000480563 KRTAP16-1A8MUX0 517 aa5.57□□□□□ -1.52
TTC28-206ENST00000480563 RBM3P98179 157 aaKnown RBP5.57□□□□□ -1.52
TTC28-206ENST00000480563 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
TTC28-206ENST00000480563 NEBP20929 6669 aa5.56□□□□□ -1.52
TTC28-206ENST00000480563 C9JAW5 83 aa5.56□□□□□ -1.52
TTC28-206ENST00000480563 JMJD7-PLA2G4BH0Y9G9 81 aa5.56□□□□□ -1.52
TTC28-206ENST00000480563 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
TTC28-206ENST00000480563 A0A087WSZ3 146 aa5.55□□□□□ -1.52
TTC28-206ENST00000480563 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
TTC28-206ENST00000480563 CCKP06307 115 aa5.55□□□□□ -1.52
TTC28-206ENST00000480563 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
TTC28-206ENST00000480563 HRES1P13985 223 aa5.54□□□□□ -1.52
TTC28-206ENST00000480563 DSCR10P59022 87 aa5.54□□□□□ -1.52
TTC28-206ENST00000480563 VPS25Q9BRG1 176 aa5.54□□□□□ -1.52
TTC28-206ENST00000480563 SPCS1Q9Y6A9 102 aa5.54□□□□□ -1.52
TTC28-206ENST00000480563 H3BT86 120 aa5.53□□□□□ -1.52
TTC28-206ENST00000480563 A0A1W2PNM2 257 aa5.52□□□□□ -1.53
TTC28-206ENST00000480563 PDE6GP18545 87 aa5.52□□□□□ -1.53
TTC28-206ENST00000480563 NOTCH2NLQ7Z3S9 236 aa5.5□□□□□ -1.53
TTC28-206ENST00000480563 LOC110117498A0A087WWA1 95 aa5.49□□□□□ -1.53
TTC28-206ENST00000480563 SIGMAR1Q99720 223 aa5.49□□□□□ -1.53
TTC28-206ENST00000480563 A0A1B0GW54 56 aa5.48□□□□□ -1.53
TTC28-206ENST00000480563 LINC00313P59037 77 aa5.48□□□□□ -1.53
TTC28-206ENST00000480563 GTF2H5Q6ZYL4 71 aa5.48□□□□□ -1.53
TTC28-206ENST00000480563 K7EP34 96 aa5.47□□□□□ -1.53
TTC28-206ENST00000480563 MTURNQ8N3F0 131 aa5.47□□□□□ -1.53
TTC28-206ENST00000480563 C14orf132Q9NPU4 83 aa5.47□□□□□ -1.53
TTC28-206ENST00000480563 Q6ZQT0 140 aa5.46□□□□□ -1.54
TTC28-206ENST00000480563 IGKV4-1P06312 121 aa5.45□□□□□ -1.54
TTC28-206ENST00000480563 J3KT08 172 aa5.43□□□□□ -1.54
TTC28-206ENST00000480563 A8MWP4 228 aa5.42□□□□□ -1.54
TTC28-206ENST00000480563 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
TTC28-206ENST00000480563 LINC00472Q9H8W2 130 aa5.41□□□□□ -1.54
TTC28-206ENST00000480563 NDUFB1O75438 58 aa5.39□□□□□ -1.55
TTC28-206ENST00000480563 C8orf87E5RJ46 101 aa5.38□□□□□ -1.55
TTC28-206ENST00000480563 F8W1H4 67 aa5.38□□□□□ -1.55
TTC28-206ENST00000480563 NREPQ16612 68 aa5.38□□□□□ -1.55
TTC28-206ENST00000480563 DEFB116Q30KQ4 102 aa5.38□□□□□ -1.55
TTC28-206ENST00000480563 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
TTC28-206ENST00000480563 IGHV6-1A0A0B4J1U7 121 aa5.37□□□□□ -1.55
TTC28-206ENST00000480563 SMCPP49901 116 aaPredicted RBP5.37□□□□□ -1.55
TTC28-206ENST00000480563 PRO0461Q9UI25 63 aa5.37□□□□□ -1.55
TTC28-206ENST00000480563 A0A1B0GVX0 72 aa5.36□□□□□ -1.55
TTC28-206ENST00000480563 SPINK7P58062 85 aa5.36□□□□□ -1.55
TTC28-206ENST00000480563 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
TTC28-206ENST00000480563 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
TTC28-206ENST00000480563 UBL5Q9BZL1 73 aa5.32□□□□□ -1.56
TTC28-206ENST00000480563 BPY2O14599 106 aa5.31□□□□□ -1.56
TTC28-206ENST00000480563 ETDBQ3ZM63 59 aa5.31□□□□□ -1.56
TTC28-206ENST00000480563 Q6ZVQ6 151 aa5.3□□□□□ -1.56
TTC28-206ENST00000480563 WFDC13Q8IUB5 93 aa5.29□□□□□ -1.56
TTC28-206ENST00000480563 IGKV3D-7A0A0C4DH55 119 aa5.28□□□□□ -1.56
TTC28-206ENST00000480563 PRR15Q8IV56 129 aa5.28□□□□□ -1.56
TTC28-206ENST00000480563 C8orf17Q9NRJ1 99 aa5.28□□□□□ -1.56
TTC28-206ENST00000480563 A0A1B0GV90 55 aa5.25□□□□□ -1.57
TTC28-206ENST00000480563 A6NN06 94 aa5.25□□□□□ -1.57
TTC28-206ENST00000480563 K7EQZ3 153 aa5.25□□□□□ -1.57
TTC28-206ENST00000480563 ACYP1P07311 99 aa5.24□□□□□ -1.57
TTC28-206ENST00000480563 TMEM254Q8TBM7 123 aa5.23□□□□□ -1.57
TTC28-206ENST00000480563 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
TTC28-206ENST00000480563 hDV103S1A0JD37 113 aa5.22□□□□□ -1.57
TTC28-206ENST00000480563 MRPL34Q9BQ48 92 aaKnown RBP5.22□□□□□ -1.57
TTC28-206ENST00000480563 FAM240AA0A1B0GVK7 77 aa5.21□□□□□ -1.58
TTC28-206ENST00000480563 NDUFS5O43920 106 aa5.21□□□□□ -1.58
TTC28-206ENST00000480563 CXCL6P80162 114 aa5.2□□□□□ -1.58
TTC28-206ENST00000480563 H1FX-AS1Q4G0G2 97 aa5.2□□□□□ -1.58
TTC28-206ENST00000480563 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
TTC28-206ENST00000480563 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
TTC28-206ENST00000480563 CASC2Q6XLA1 102 aa5.19□□□□□ -1.58
TTC28-206ENST00000480563 Q8N9L7 120 aa5.19□□□□□ -1.58
TTC28-206ENST00000480563 KMT2DO14686 5537 aa5.19□□□□□ -1.58
TTC28-206ENST00000480563 ATP5EP2Q5VTU8 51 aa5.18□□□□□ -1.58
TTC28-206ENST00000480563 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
TTC28-206ENST00000480563 J3QR89 54 aa5.17□□□□□ -1.58
TTC28-206ENST00000480563 MT1BP07438 61 aa5.15□□□□□ -1.59
TTC28-206ENST00000480563 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
TTC28-206ENST00000480563 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
TTC28-206ENST00000480563 Q5VV11 94 aa5.13□□□□□ -1.59
TTC28-206ENST00000480563 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
TTC28-206ENST00000480563 LINC00643Q86TS7 51 aa5.1□□□□□ -1.59
TTC28-206ENST00000480563 HIST1H4AP62805 103 aaKnown RBP5.09□□□□□ -1.59
TTC28-206ENST00000480563 KRTAP19-8Q3LI54 63 aa5.08□□□□□ -1.6
TTC28-206ENST00000480563 TP53AIP1Q9HCN2 124 aa5.08□□□□□ -1.6
TTC28-206ENST00000480563 FAM236AA0A1B0GUQ0 79 aa5.07□□□□□ -1.6
TTC28-206ENST00000480563 FAM236BA0A1B0GV22 79 aa5.07□□□□□ -1.6
TTC28-206ENST00000480563 C7orf65Q6ZTY9 151 aa5.07□□□□□ -1.6
TTC28-206ENST00000480563 IGKV2D-30A0A075B6S6 120 aa5.05□□□□□ -1.6
TTC28-206ENST00000480563 IGKV2-30P06310 120 aa5.05□□□□□ -1.6
TTC28-206ENST00000480563 SPRR2GQ9BYE4 73 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms