RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 SRRM2Q9UQ35 2752 aaKnown RBP10.29□□□□□ -0.76
SH3D21-203ENST00000480549 IGLV5-52A0A0A0MRZ9 124 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 A0A0G2JQZ4 141 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 A0A1B0GW54 56 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 SPINK7P58062 85 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 SPRR1BP22528 89 aa10.28□□□□□ -0.76
SH3D21-203ENST00000480549 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.77
SH3D21-203ENST00000480549 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
SH3D21-203ENST00000480549 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
SH3D21-203ENST00000480549 PLAC8Q9NZF1 115 aa10.26□□□□□ -0.77
SH3D21-203ENST00000480549 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
SH3D21-203ENST00000480549 IGFL1Q6UW32 110 aa10.25□□□□□ -0.77
SH3D21-203ENST00000480549 ADM2Q7Z4H4 148 aa10.24□□□□□ -0.77
SH3D21-203ENST00000480549 FAT2Q9NYQ8 4349 aa10.21□□□□□ -0.77
SH3D21-203ENST00000480549 PKD1P98161 4303 aa10.21□□□□□ -0.78
SH3D21-203ENST00000480549 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
SH3D21-203ENST00000480549 LINC01554Q52M75 96 aa10.2□□□□□ -0.78
SH3D21-203ENST00000480549 KRTAP10-2P60368 255 aa10.19□□□□□ -0.78
SH3D21-203ENST00000480549 PCOTHQ58A44 107 aa10.19□□□□□ -0.78
SH3D21-203ENST00000480549 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
SH3D21-203ENST00000480549 CASC2Q6XLA1 102 aa10.18□□□□□ -0.78
SH3D21-203ENST00000480549 H3BPC8 53 aa10.15□□□□□ -0.78
SH3D21-203ENST00000480549 PRR26Q8N8Z3 221 aa10.14□□□□□ -0.79
SH3D21-203ENST00000480549 A0A087WSZ3 146 aa10.13□□□□□ -0.79
SH3D21-203ENST00000480549 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
SH3D21-203ENST00000480549 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
SH3D21-203ENST00000480549 LINC00483Q53H64 154 aa10.12□□□□□ -0.79
SH3D21-203ENST00000480549 ZNF861PO60384 105 aa10.1□□□□□ -0.79
SH3D21-203ENST00000480549 SACSQ9NZJ4 4579 aa10.09□□□□□ -0.79
SH3D21-203ENST00000480549 CIRBP-AS1Q8TBR5 109 aa10.08□□□□□ -0.8
SH3D21-203ENST00000480549 ZNF706Q9Y5V0 76 aaPredicted RBP10.07□□□□□ -0.8
SH3D21-203ENST00000480549 Q6ZSA8 131 aa10.06□□□□□ -0.8
SH3D21-203ENST00000480549 KRTAP10-1P60331 282 aa10.05□□□□□ -0.8
SH3D21-203ENST00000480549 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
SH3D21-203ENST00000480549 IGLV7-43P04211 117 aa10.04□□□□□ -0.8
SH3D21-203ENST00000480549 ANAPC11Q9NYG5 84 aa10.01□□□□□ -0.81
SH3D21-203ENST00000480549 LRP1BQ9NZR2 4599 aa10.01□□□□□ -0.81
SH3D21-203ENST00000480549 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
SH3D21-203ENST00000480549 HRES1P13985 223 aa10□□□□□ -0.81
SH3D21-203ENST00000480549 LINC00472Q9H8W2 130 aa9.98□□□□□ -0.81
SH3D21-203ENST00000480549 A8MWP4 228 aa9.93□□□□□ -0.82
SH3D21-203ENST00000480549 RETNLBQ9BQ08 111 aa9.93□□□□□ -0.82
SH3D21-203ENST00000480549 PKHD1P08F94 4074 aa9.92□□□□□ -0.82
SH3D21-203ENST00000480549 Q96NJ1 140 aa9.91□□□□□ -0.82
SH3D21-203ENST00000480549 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
SH3D21-203ENST00000480549 VPS13BQ7Z7G8 4022 aa9.89□□□□□ -0.83
SH3D21-203ENST00000480549 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
SH3D21-203ENST00000480549 RYR2Q92736 4967 aa9.83□□□□□ -0.84
SH3D21-203ENST00000480549 DYNC1H1Q14204 4646 aaKnown RBP9.82□□□□□ -0.84
SH3D21-203ENST00000480549 A0A087X002 238 aa9.8□□□□□ -0.84
SH3D21-203ENST00000480549 SSBP3-AS1Q7Z2R9 100 aa9.8□□□□□ -0.84
SH3D21-203ENST00000480549 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
SH3D21-203ENST00000480549 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
SH3D21-203ENST00000480549 KRTAP1-4P0C5Y4 121 aa9.77□□□□□ -0.85
SH3D21-203ENST00000480549 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
SH3D21-203ENST00000480549 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
SH3D21-203ENST00000480549 KMT2CQ8NEZ4 4911 aaKnown RBP9.75□□□□□ -0.85
SH3D21-203ENST00000480549 A0A1B0GU69 56 aa9.73□□□□□ -0.85
SH3D21-203ENST00000480549 APOBP04114 4563 aaKnown RBP9.73□□□□□ -0.85
SH3D21-203ENST00000480549 A0A1B0GVX0 72 aa9.71□□□□□ -0.85
SH3D21-203ENST00000480549 SPATA8Q6RVD6 105 aa9.71□□□□□ -0.85
SH3D21-203ENST00000480549 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.86
SH3D21-203ENST00000480549 C8orf17Q9NRJ1 99 aa9.7□□□□□ -0.86
SH3D21-203ENST00000480549 IGHV6-1A0A0B4J1U7 121 aa9.68□□□□□ -0.86
SH3D21-203ENST00000480549 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
SH3D21-203ENST00000480549 SPINK6Q6UWN8 80 aa9.66□□□□□ -0.86
SH3D21-203ENST00000480549 NOTCH2NLQ7Z3S9 236 aa9.65□□□□□ -0.86
SH3D21-203ENST00000480549 ACYP2P14621 99 aa9.65□□□□□ -0.87
SH3D21-203ENST00000480549 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
SH3D21-203ENST00000480549 UQCR11O14957 56 aa9.63□□□□□ -0.87
SH3D21-203ENST00000480549 FAT1Q14517 4588 aa9.61□□□□□ -0.87
SH3D21-203ENST00000480549 KRTAP10-4P60372 401 aaPredicted RBP9.59□□□□□ -0.87
SH3D21-203ENST00000480549 MRPL34Q9BQ48 92 aaKnown RBP9.58□□□□□ -0.88
SH3D21-203ENST00000480549 TYMSOSQ8TAI1 123 aa9.57□□□□□ -0.88
SH3D21-203ENST00000480549 Q5W150 140 aa9.54□□□□□ -0.88
SH3D21-203ENST00000480549 ROMO1P60602 79 aa9.53□□□□□ -0.88
SH3D21-203ENST00000480549 RYR3Q15413 4870 aa9.51□□□□□ -0.89
SH3D21-203ENST00000480549 PKHD1L1Q86WI1 4243 aa9.51□□□□□ -0.89
SH3D21-203ENST00000480549 SPINK1P00995 79 aa9.5□□□□□ -0.89
SH3D21-203ENST00000480549 DMAC1Q96GE9 116 aa9.46□□□□□ -0.9
SH3D21-203ENST00000480549 LINC00304Q8N9R0 145 aa9.45□□□□□ -0.9
SH3D21-203ENST00000480549 RPS29P62273 56 aaKnown RBP9.43□□□□□ -0.9
SH3D21-203ENST00000480549 KRTAP13-3Q3SY46 172 aa9.42□□□□□ -0.9
SH3D21-203ENST00000480549 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
SH3D21-203ENST00000480549 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
SH3D21-203ENST00000480549 HSPG2P98160 4391 aa9.4□□□□□ -0.9
SH3D21-203ENST00000480549 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
SH3D21-203ENST00000480549 P0C880 135 aa9.32□□□□□ -0.92
SH3D21-203ENST00000480549 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
SH3D21-203ENST00000480549 RYR1P21817 5038 aa9.31□□□□□ -0.92
SH3D21-203ENST00000480549 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
SH3D21-203ENST00000480549 A8MUU9 505 aa9.28□□□□□ -0.92
SH3D21-203ENST00000480549 TNXBP22105 4242 aa9.28□□□□□ -0.92
SH3D21-203ENST00000480549 Q5VSD8 79 aa9.27□□□□□ -0.93
SH3D21-203ENST00000480549 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
SH3D21-203ENST00000480549 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
SH3D21-203ENST00000480549 IGKV2-30P06310 120 aa9.2□□□□□ -0.94
SH3D21-203ENST00000480549 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
SH3D21-203ENST00000480549 KRTAP10-8P60410 259 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms