RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 KRTAP12-2P59991 146 aa4.96□□□□□ -1.62
USP11-208ENST00000480104 TEN1Q86WV5 123 aa4.96□□□□□ -1.62
USP11-208ENST00000480104 MT4P47944 62 aa4.95□□□□□ -1.62
USP11-208ENST00000480104 MT1XP80297 61 aa4.95□□□□□ -1.62
USP11-208ENST00000480104 PRO2289Q9P1D8 64 aa4.95□□□□□ -1.62
USP11-208ENST00000480104 PAM16Q9Y3D7 125 aa4.95□□□□□ -1.62
USP11-208ENST00000480104 SPATA45Q537H7 98 aa4.94□□□□□ -1.62
USP11-208ENST00000480104 C5orf47Q569G3 176 aa4.94□□□□□ -1.62
USP11-208ENST00000480104 A6NDN8 102 aa4.93□□□□□ -1.62
USP11-208ENST00000480104 UQCR10Q9UDW1 63 aa4.93□□□□□ -1.62
USP11-208ENST00000480104 PLNP26678 52 aa4.92□□□□□ -1.62
USP11-208ENST00000480104 LINC00575Q6W349 94 aa4.92□□□□□ -1.62
USP11-208ENST00000480104 ATOH7Q8N100 152 aa4.92□□□□□ -1.62
USP11-208ENST00000480104 TIMM17BO60830 172 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 DPM2O94777 84 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 IGKCP01834 107 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 SMIM11BQ8TCY0 68 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 PMCHL2Q9BQD1 86 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 SNHG12Q9BXW3 62 aa4.91□□□□□ -1.62
USP11-208ENST00000480104 hADV29S1A0JD25 119 aa4.9□□□□□ -1.63
USP11-208ENST00000480104 DEFB116Q30KQ4 102 aa4.89□□□□□ -1.63
USP11-208ENST00000480104 DLEU1O43261 78 aa4.88□□□□□ -1.63
USP11-208ENST00000480104 COX8AP10176 69 aa4.88□□□□□ -1.63
USP11-208ENST00000480104 C14orf144Q96I85 54 aa4.88□□□□□ -1.63
USP11-208ENST00000480104 M0R143 59 aa4.87□□□□□ -1.63
USP11-208ENST00000480104 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
USP11-208ENST00000480104 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
USP11-208ENST00000480104 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
USP11-208ENST00000480104 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
USP11-208ENST00000480104 E9PLD3 99 aa4.84□□□□□ -1.63
USP11-208ENST00000480104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.84□□□□□ -1.63
USP11-208ENST00000480104 VAMP3Q15836 100 aa4.83□□□□□ -1.64
USP11-208ENST00000480104 HIGD1BQ9P298 99 aa4.83□□□□□ -1.64
USP11-208ENST00000480104 COL5A1-AS1Q5SY13 56 aa4.82□□□□□ -1.64
USP11-208ENST00000480104 LCE4AQ5TA78 99 aa4.82□□□□□ -1.64
USP11-208ENST00000480104 LYRM7Q5U5X0 104 aa4.82□□□□□ -1.64
USP11-208ENST00000480104 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
USP11-208ENST00000480104 HSD52Q0P140 79 aa4.81□□□□□ -1.64
USP11-208ENST00000480104 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
USP11-208ENST00000480104 DSCR8Q96T75 97 aa4.81□□□□□ -1.64
USP11-208ENST00000480104 LCA10Q71F78 164 aa4.8□□□□□ -1.64
USP11-208ENST00000480104 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
USP11-208ENST00000480104 IGKV3D-7A0A0C4DH55 119 aa4.79□□□□□ -1.64
USP11-208ENST00000480104 RBM3P98179 157 aaKnown RBP4.79□□□□□ -1.64
USP11-208ENST00000480104 BATFQ16520 125 aa4.79□□□□□ -1.64
USP11-208ENST00000480104 BVES-AS1Q5T3Y7 98 aa4.79□□□□□ -1.64
USP11-208ENST00000480104 PRR15Q8IV56 129 aa4.79□□□□□ -1.64
USP11-208ENST00000480104 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
USP11-208ENST00000480104 SCGB1D4Q6XE38 83 aa4.77□□□□□ -1.65
USP11-208ENST00000480104 TTTY13Q9BZ97 58 aa4.77□□□□□ -1.65
USP11-208ENST00000480104 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
USP11-208ENST00000480104 HIST1H4GQ99525 98 aa4.76□□□□□ -1.65
USP11-208ENST00000480104 CEND1Q8N111 149 aa4.75□□□□□ -1.65
USP11-208ENST00000480104 TMEM238LA0A1B0GVL6 79 aa4.74□□□□□ -1.65
USP11-208ENST00000480104 A6NJY4 79 aa4.74□□□□□ -1.65
USP11-208ENST00000480104 NDUFV3P56181 108 aaKnown RBP4.74□□□□□ -1.65
USP11-208ENST00000480104 COPS9Q8WXC6 57 aa4.74□□□□□ -1.65
USP11-208ENST00000480104 CRIPTQ9P021 101 aa4.74□□□□□ -1.65
USP11-208ENST00000480104 A0A1B0GV90 55 aa4.73□□□□□ -1.65
USP11-208ENST00000480104 H3BMG7 143 aa4.72□□□□□ -1.65
USP11-208ENST00000480104 TAX1BP3O14907 124 aa4.72□□□□□ -1.65
USP11-208ENST00000480104 IFITM1P13164 125 aa4.72□□□□□ -1.65
USP11-208ENST00000480104 FXYD2P54710 66 aa4.71□□□□□ -1.66
USP11-208ENST00000480104 KRTAP10-7P60409 375 aaPredicted RBP4.71□□□□□ -1.66
USP11-208ENST00000480104 LCE5AQ5TCM9 118 aa4.71□□□□□ -1.66
USP11-208ENST00000480104 MUSTN1Q8IVN3 82 aa4.71□□□□□ -1.66
USP11-208ENST00000480104 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
USP11-208ENST00000480104 C9orf118A6NHY6 69 aa4.7□□□□□ -1.66
USP11-208ENST00000480104 S4R3F8 94 aa4.7□□□□□ -1.66
USP11-208ENST00000480104 TRBV7-4A0A0J9YYF1 115 aa4.68□□□□□ -1.66
USP11-208ENST00000480104 A0A0B4J2C4 111 aa4.67□□□□□ -1.66
USP11-208ENST00000480104 C4orf26Q17RF5 130 aa4.67□□□□□ -1.66
USP11-208ENST00000480104 IGKV2D-30A0A075B6S6 120 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 IGKV2-30P06310 120 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 FABP2P12104 132 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
USP11-208ENST00000480104 A0A1W2PPM0 123 aa4.65□□□□□ -1.67
USP11-208ENST00000480104 K7ERJ3 54 aa4.65□□□□□ -1.67
USP11-208ENST00000480104 PRO1854Q9UHT4 67 aa4.65□□□□□ -1.67
USP11-208ENST00000480104 MUC5ACP98088 5654 aa4.64□□□□□ -1.67
USP11-208ENST00000480104 K7EP34 96 aa4.63□□□□□ -1.67
USP11-208ENST00000480104 PLAC4Q8WY50 150 aa4.63□□□□□ -1.67
USP11-208ENST00000480104 SPCS1Q9Y6A9 102 aa4.62□□□□□ -1.67
USP11-208ENST00000480104 COX6CP09669 75 aa4.6□□□□□ -1.67
USP11-208ENST00000480104 C7orf65Q6ZTY9 151 aa4.6□□□□□ -1.67
USP11-208ENST00000480104 NAA38Q9BRA0 125 aaKnown RBP4.6□□□□□ -1.67
USP11-208ENST00000480104 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
USP11-208ENST00000480104 MUC5BQ9HC84 5762 aaPredicted RBP4.6□□□□□ -1.67
USP11-208ENST00000480104 A0A1B0GV72 72 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 TRACP01848 142 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 SCGB1C2P0DMR2 95 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 PSMB2P49721 201 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 ANKRD29Q8N6D5 301 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 KRTAP3-1Q9BYR8 98 aa4.59□□□□□ -1.67
USP11-208ENST00000480104 F8W1H4 67 aa4.57□□□□□ -1.68
USP11-208ENST00000480104 Q6ZVQ6 151 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms