RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 C12orf57Q99622 126 aa4.46□□□□□ -1.7
GPNMB-211ENST00000479625 KRTDAPP60985 99 aa4.44□□□□□ -1.7
GPNMB-211ENST00000479625 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
GPNMB-211ENST00000479625 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.44□□□□□ -1.7
GPNMB-211ENST00000479625 H3BMG7 143 aa4.43□□□□□ -1.7
GPNMB-211ENST00000479625 FAM218AQ96MZ4 157 aa4.42□□□□□ -1.7
GPNMB-211ENST00000479625 A0A1B0GV72 72 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BKO60814 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BJP06899 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BOP23527 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BBP33778 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BDP58876 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BCP62807 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST2H2BEQ16778 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BHQ93079 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BNQ99877 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 HIST1H2BMQ99879 126 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 LINC00472Q9H8W2 130 aa4.41□□□□□ -1.7
GPNMB-211ENST00000479625 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
GPNMB-211ENST00000479625 C8orf87E5RJ46 101 aa4.38□□□□□ -1.71
GPNMB-211ENST00000479625 FABP2P12104 132 aa4.38□□□□□ -1.71
GPNMB-211ENST00000479625 Q5VV11 94 aa4.38□□□□□ -1.71
GPNMB-211ENST00000479625 TRBV7-4A0A0J9YYF1 115 aa4.37□□□□□ -1.71
GPNMB-211ENST00000479625 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
GPNMB-211ENST00000479625 RAB37Q96AX2 223 aa4.37□□□□□ -1.71
GPNMB-211ENST00000479625 SPRR2EP22531 72 aa4.36□□□□□ -1.71
GPNMB-211ENST00000479625 SPRR2BP35325 72 aa4.36□□□□□ -1.71
GPNMB-211ENST00000479625 SPRR2AP35326 72 aa4.36□□□□□ -1.71
GPNMB-211ENST00000479625 LCE1EQ5T753 118 aa4.36□□□□□ -1.71
GPNMB-211ENST00000479625 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
GPNMB-211ENST00000479625 ANKRD29Q8N6D5 301 aa4.35□□□□□ -1.71
GPNMB-211ENST00000479625 MT3P25713 68 aa4.34□□□□□ -1.71
GPNMB-211ENST00000479625 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
GPNMB-211ENST00000479625 SNCGO76070 127 aa4.32□□□□□ -1.72
GPNMB-211ENST00000479625 TRACP01848 142 aa4.32□□□□□ -1.72
GPNMB-211ENST00000479625 CCKP06307 115 aa4.32□□□□□ -1.72
GPNMB-211ENST00000479625 LYRM7Q5U5X0 104 aa4.32□□□□□ -1.72
GPNMB-211ENST00000479625 KRTAP2-1Q9BYU5 128 aa4.32□□□□□ -1.72
GPNMB-211ENST00000479625 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
GPNMB-211ENST00000479625 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
GPNMB-211ENST00000479625 H0YGX0 51 aa4.31□□□□□ -1.72
GPNMB-211ENST00000479625 HIST1H4GQ99525 98 aa4.3□□□□□ -1.72
GPNMB-211ENST00000479625 SPRR2GQ9BYE4 73 aa4.3□□□□□ -1.72
GPNMB-211ENST00000479625 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
GPNMB-211ENST00000479625 SNRPEP62304 92 aaKnown RBP4.28□□□□□ -1.72
GPNMB-211ENST00000479625 COA6Q5JTJ3 125 aaKnown RBP4.28□□□□□ -1.72
GPNMB-211ENST00000479625 VPS25Q9BRG1 176 aa4.28□□□□□ -1.72
GPNMB-211ENST00000479625 IGKV3D-7A0A0C4DH55 119 aa4.27□□□□□ -1.73
GPNMB-211ENST00000479625 A0A1B0GX51 115 aa4.26□□□□□ -1.73
GPNMB-211ENST00000479625 C5orf47Q569G3 176 aa4.26□□□□□ -1.73
GPNMB-211ENST00000479625 DSCR8Q96T75 97 aa4.26□□□□□ -1.73
GPNMB-211ENST00000479625 C8orf17Q9NRJ1 99 aa4.26□□□□□ -1.73
GPNMB-211ENST00000479625 IMUPQ9GZP8 106 aa4.25□□□□□ -1.73
GPNMB-211ENST00000479625 A0A0B4J2C4 111 aa4.24□□□□□ -1.73
GPNMB-211ENST00000479625 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
GPNMB-211ENST00000479625 ORMDL1Q9P0S3 153 aa4.24□□□□□ -1.73
GPNMB-211ENST00000479625 J3KT08 172 aa4.23□□□□□ -1.73
GPNMB-211ENST00000479625 S100A1P23297 94 aa4.22□□□□□ -1.73
GPNMB-211ENST00000479625 NDUFB1O75438 58 aa4.21□□□□□ -1.74
GPNMB-211ENST00000479625 DNAL4O96015 105 aa4.21□□□□□ -1.74
GPNMB-211ENST00000479625 SPRR2DP22532 72 aa4.21□□□□□ -1.74
GPNMB-211ENST00000479625 Q6ZVQ6 151 aa4.21□□□□□ -1.74
GPNMB-211ENST00000479625 RBM3P98179 157 aaKnown RBP4.19□□□□□ -1.74
GPNMB-211ENST00000479625 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
GPNMB-211ENST00000479625 COX8AP10176 69 aa4.18□□□□□ -1.74
GPNMB-211ENST00000479625 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
GPNMB-211ENST00000479625 Q6ZQT0 140 aa4.17□□□□□ -1.74
GPNMB-211ENST00000479625 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
GPNMB-211ENST00000479625 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 UBE2V1Q13404 147 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 C7orf65Q6ZTY9 151 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 C2orf91Q6ZV80 131 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 CEND1Q8N111 149 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 HIST1H2BLQ99880 126 aa4.16□□□□□ -1.74
GPNMB-211ENST00000479625 MRPL34Q9BQ48 92 aaKnown RBP4.16□□□□□ -1.74
GPNMB-211ENST00000479625 MMP24-AS1A0A0U1RRL7 71 aa4.15□□□□□ -1.75
GPNMB-211ENST00000479625 H3BQ85 93 aa4.15□□□□□ -1.75
GPNMB-211ENST00000479625 NDUFS5O43920 106 aa4.14□□□□□ -1.75
GPNMB-211ENST00000479625 Q5W150 140 aa4.14□□□□□ -1.75
GPNMB-211ENST00000479625 HIST3H2BBQ8N257 126 aa4.14□□□□□ -1.75
GPNMB-211ENST00000479625 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
GPNMB-211ENST00000479625 S4R3F8 94 aa4.14□□□□□ -1.75
GPNMB-211ENST00000479625 DLEU1O43261 78 aa4.13□□□□□ -1.75
GPNMB-211ENST00000479625 FXYD2P54710 66 aa4.13□□□□□ -1.75
GPNMB-211ENST00000479625 C14orf144Q96I85 54 aa4.13□□□□□ -1.75
GPNMB-211ENST00000479625 LCA10Q71F78 164 aa4.12□□□□□ -1.75
GPNMB-211ENST00000479625 HIGD1BQ9P298 99 aa4.12□□□□□ -1.75
GPNMB-211ENST00000479625 PSMB2P49721 201 aa4.11□□□□□ -1.75
GPNMB-211ENST00000479625 CSAG1Q6PB30 78 aa4.11□□□□□ -1.75
GPNMB-211ENST00000479625 PRR15Q8IV56 129 aa4.11□□□□□ -1.75
GPNMB-211ENST00000479625 C9JAW5 83 aa4.1□□□□□ -1.75
GPNMB-211ENST00000479625 K7ERJ3 54 aa4.1□□□□□ -1.75
GPNMB-211ENST00000479625 S100A2P29034 98 aa4.1□□□□□ -1.75
GPNMB-211ENST00000479625 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.76
GPNMB-211ENST00000479625 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
GPNMB-211ENST00000479625 hDV103S1A0JD37 113 aa4.08□□□□□ -1.76
GPNMB-211ENST00000479625 MT1XP80297 61 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms