RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 I3L3M4 83 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 DEFB1P60022 68 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 UBE2D4Q9Y2X8 147 aa-0.34□□□□□ -2.46
CCDC58-204ENST00000479414 SPTY2D1-AS1A0A0U1RR47 76 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 CHKB-CPT1BH3BT56 60 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 HMGN4O00479 90 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 COX6CP09669 75 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 HTN3P15516 51 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 UBE2L3P68036 154 aaKnown RBP-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 TSC22D3Q99576 134 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 C12orf57Q99622 126 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 ARL2-SNX15V9GYD0 113 aa-0.35□□□□□ -2.47
CCDC58-204ENST00000479414 SEC11AP67812 179 aa-0.36□□□□□ -2.47
CCDC58-204ENST00000479414 MEIG1Q5JSS6 88 aa-0.36□□□□□ -2.47
CCDC58-204ENST00000479414 C1orf54Q8WWF1 131 aa-0.36□□□□□ -2.47
CCDC58-204ENST00000479414 FAM167A-AS1Q96KT0 104 aa-0.36□□□□□ -2.47
CCDC58-204ENST00000479414 LINC00472Q9H8W2 130 aa-0.36□□□□□ -2.47
CCDC58-204ENST00000479414 TRAV30A0A087WSZ9 112 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 MIF4GDA9UHW6 222 aaKnown RBP-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 IGLC1P0CG04 106 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 FGF7P21781 194 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 SNCAP37840 140 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 ATP5EP56381 51 aaPredicted RBP-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 KRTDAPP60985 99 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 GNG11P61952 73 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 BTG2P78543 158 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 CATR1Q13166 79 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 LINC01556Q5JQF7 62 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 RPS27LQ71UM5 84 aaKnown RBP-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 COMMD6Q7Z4G1 85 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 WFDC10BQ8IUB3 73 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 PSENENQ9NZ42 101 aa-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 KTN1Q86UP2 1357 aaKnown RBP-0.37□□□□□ -2.47
CCDC58-204ENST00000479414 NAP1L6A6NFF2 107 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 ATP6V1G2-DDX39BF2Z307 99 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 UQCRHP07919 91 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 HMGA1P17096 107 aaKnown RBP-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 UBE2D3P61077 147 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 TDRG1Q3Y452 100 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 C10orf113Q5VZT2 155 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 C5orf38Q86SI9 138 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 LEAP2Q969E1 77 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 MANBALQ9NQG1 85 aa-0.38□□□□□ -2.47
CCDC58-204ENST00000479414 UBE2L5PA0A1B0GUS4 154 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 K7EP34 96 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 CCL22O00626 93 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 AKAIN1P0CW23 69 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 SVBPQ8N300 66 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 C9orf62Q8N4C0 152 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 S4R3F8 94 aa-0.39□□□□□ -2.47
CCDC58-204ENST00000479414 A0A096LNI7 61 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 A0A096LPF7 62 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 SPART-AS1P0CW21 52 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 SAA2P0DJI9 122 aaPredicted RBP-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 APELAP0DMC3 54 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 COX14Q96I36 57 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 LINC00470Q9BZP3 86 aa-0.4□□□□□ -2.47
CCDC58-204ENST00000479414 H3BQF6 201 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 K7EP13 123 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 SNAPC5O75971 98 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 UBE2D2P62837 147 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 GNGT1P63211 74 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 DEFB114Q30KQ6 69 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 HEPN1Q6WQI6 88 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 CDKN2A-AS1Q9UH64 79 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 PRO1854Q9UHT4 67 aa-0.41□□□□□ -2.48
CCDC58-204ENST00000479414 A0A1B0GU69 56 aa-0.42□□□□□ -2.48
CCDC58-204ENST00000479414 DEFB110Q30KQ9 67 aa-0.42□□□□□ -2.48
CCDC58-204ENST00000479414 H1FX-AS1Q4G0G2 97 aa-0.42□□□□□ -2.48
CCDC58-204ENST00000479414 FAM223AQ8IWN6 122 aa-0.42□□□□□ -2.48
CCDC58-204ENST00000479414 TSLPQ969D9 159 aa-0.42□□□□□ -2.48
CCDC58-204ENST00000479414 A8MTW9 85 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 H3BNG1 76 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 DEFB130BP0DP73 79 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 DEFB130AP0DP74 79 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 WFDC13Q8IUB5 93 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 PP6455Q8WZ26 134 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 SPRR4Q96PI1 79 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 AP4S1Q9Y587 144 aa-0.43□□□□□ -2.48
CCDC58-204ENST00000479414 UQCRHLA0A096LP55 91 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 TMEM262E9PQX1 116 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 F8WEM9 126 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 GNG7O60262 68 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 SARNPP82979 210 aaKnown RBP-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 NMSQ5H8A3 153 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 CGREF1Q99674 301 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 CDC42SE2Q9NRR3 84 aa-0.44□□□□□ -2.48
CCDC58-204ENST00000479414 LOC100130705A0A1B0GUX0 176 aa-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 CRYM-AS1A6NIL9 109 aa-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 ARMS2P0C7Q2 107 aa-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 HTN1P15515 57 aa-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 RPL38P63173 70 aaKnown RBP-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 MRPS10P82664 201 aaKnown RBP-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 LSM10Q969L4 123 aaKnown RBP-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 HILPDAQ9Y5L2 63 aa-0.45□□□□□ -2.48
CCDC58-204ENST00000479414 A0A087WVE0 104 aa-0.46□□□□□ -2.48
CCDC58-204ENST00000479414 A0A0G2JND7 137 aa-0.46□□□□□ -2.48
CCDC58-204ENST00000479414 LINC01546A6NGU7 62 aa-0.46□□□□□ -2.48
CCDC58-204ENST00000479414 H3BQ15 152 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms