RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 A0A1B0GVX0 72 aa10.18□□□□□ -0.78
RUNX3-204ENST00000479341 A8MWP4 228 aa10.18□□□□□ -0.78
RUNX3-204ENST00000479341 BPY2O14599 106 aa10.18□□□□□ -0.78
RUNX3-204ENST00000479341 DSCR10P59022 87 aa10.18□□□□□ -0.78
RUNX3-204ENST00000479341 IGKV3D-7A0A0C4DH55 119 aa10.16□□□□□ -0.78
RUNX3-204ENST00000479341 NDUFB1O75438 58 aa10.15□□□□□ -0.78
RUNX3-204ENST00000479341 XP32Q5T750 250 aa10.15□□□□□ -0.78
RUNX3-204ENST00000479341 IGHV6-1A0A0B4J1U7 121 aa10.14□□□□□ -0.79
RUNX3-204ENST00000479341 J3QR89 54 aa10.14□□□□□ -0.79
RUNX3-204ENST00000479341 NOTCH2NLQ7Z3S9 236 aa10.14□□□□□ -0.79
RUNX3-204ENST00000479341 PRR15Q8IV56 129 aa10.13□□□□□ -0.79
RUNX3-204ENST00000479341 C8orf87E5RJ46 101 aa10.12□□□□□ -0.79
RUNX3-204ENST00000479341 LINC00313P59037 77 aa10.12□□□□□ -0.79
RUNX3-204ENST00000479341 K7EQZ3 153 aa10.09□□□□□ -0.79
RUNX3-204ENST00000479341 KRTAP16-1A8MUX0 517 aa10.08□□□□□ -0.8
RUNX3-204ENST00000479341 CXCL6P80162 114 aa10.07□□□□□ -0.8
RUNX3-204ENST00000479341 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
RUNX3-204ENST00000479341 Q8N9L7 120 aa10.06□□□□□ -0.8
RUNX3-204ENST00000479341 LINC00643Q86TS7 51 aa10.03□□□□□ -0.8
RUNX3-204ENST00000479341 C20orf166-AS1Q96NR2 134 aa10.03□□□□□ -0.8
RUNX3-204ENST00000479341 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.81
RUNX3-204ENST00000479341 K7ERU9 68 aa10.02□□□□□ -0.81
RUNX3-204ENST00000479341 RPL37P61927 97 aaKnown RBP10.02□□□□□ -0.81
RUNX3-204ENST00000479341 A8MUU9 505 aa10.01□□□□□ -0.81
RUNX3-204ENST00000479341 ATP5EP2Q5VTU8 51 aa10.01□□□□□ -0.81
RUNX3-204ENST00000479341 Q75L30 129 aa10.01□□□□□ -0.81
RUNX3-204ENST00000479341 SEC61BP60468 96 aaKnown RBP9.97□□□□□ -0.81
RUNX3-204ENST00000479341 TMEM254Q8TBM7 123 aa9.95□□□□□ -0.82
RUNX3-204ENST00000479341 MUC17Q685J3 4493 aa9.94□□□□□ -0.82
RUNX3-204ENST00000479341 hDV103S1A0JD37 113 aa9.94□□□□□ -0.82
RUNX3-204ENST00000479341 Q8N9P0 234 aaPredicted RBP9.94□□□□□ -0.82
RUNX3-204ENST00000479341 PCOTHQ58A44 107 aa9.92□□□□□ -0.82
RUNX3-204ENST00000479341 MRPL34Q9BQ48 92 aaKnown RBP9.92□□□□□ -0.82
RUNX3-204ENST00000479341 HCG22E2RYF7 251 aa9.91□□□□□ -0.82
RUNX3-204ENST00000479341 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
RUNX3-204ENST00000479341 WFDC13Q8IUB5 93 aa9.91□□□□□ -0.82
RUNX3-204ENST00000479341 MUC2Q02817 5179 aa9.89□□□□□ -0.83
RUNX3-204ENST00000479341 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
RUNX3-204ENST00000479341 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
RUNX3-204ENST00000479341 A0A0U1RQV1 116 aa9.83□□□□□ -0.84
RUNX3-204ENST00000479341 KRTAP4-1Q9BYQ7 146 aa9.82□□□□□ -0.84
RUNX3-204ENST00000479341 A0A087WVE0 104 aa9.8□□□□□ -0.84
RUNX3-204ENST00000479341 ZCCHC13Q8WW36 166 aaKnown RBP9.8□□□□□ -0.84
RUNX3-204ENST00000479341 NDUFS5O43920 106 aa9.79□□□□□ -0.84
RUNX3-204ENST00000479341 MT-ATP8P03928 68 aa9.78□□□□□ -0.84
RUNX3-204ENST00000479341 IMUPQ9GZP8 106 aa9.75□□□□□ -0.85
RUNX3-204ENST00000479341 FAT4Q6V0I7 4981 aa9.73□□□□□ -0.85
RUNX3-204ENST00000479341 Q5W150 140 aa9.7□□□□□ -0.86
RUNX3-204ENST00000479341 TP53AIP1Q9HCN2 124 aa9.69□□□□□ -0.86
RUNX3-204ENST00000479341 KRTAP9-2Q9BYQ4 174 aa9.67□□□□□ -0.86
RUNX3-204ENST00000479341 SPINK7P58062 85 aa9.61□□□□□ -0.87
RUNX3-204ENST00000479341 UQCRQO14949 82 aa9.59□□□□□ -0.87
RUNX3-204ENST00000479341 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
RUNX3-204ENST00000479341 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
RUNX3-204ENST00000479341 FAM236AA0A1B0GUQ0 79 aa9.54□□□□□ -0.88
RUNX3-204ENST00000479341 FAM236BA0A1B0GV22 79 aa9.54□□□□□ -0.88
RUNX3-204ENST00000479341 SCGB1A1P11684 91 aa9.54□□□□□ -0.88
RUNX3-204ENST00000479341 HRES1P13985 223 aa9.54□□□□□ -0.88
RUNX3-204ENST00000479341 TRAV22A0A0B4J277 110 aa9.53□□□□□ -0.88
RUNX3-204ENST00000479341 KRTAP19-2Q3LHN2 52 aa9.53□□□□□ -0.88
RUNX3-204ENST00000479341 IGKV2D-30A0A075B6S6 120 aa9.51□□□□□ -0.89
RUNX3-204ENST00000479341 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
RUNX3-204ENST00000479341 C7orf65Q6ZTY9 151 aa9.51□□□□□ -0.89
RUNX3-204ENST00000479341 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
RUNX3-204ENST00000479341 H0Y9P7 68 aa9.47□□□□□ -0.89
RUNX3-204ENST00000479341 LCE2CQ5TA81 110 aa9.46□□□□□ -0.9
RUNX3-204ENST00000479341 ATOX1O00244 68 aa9.45□□□□□ -0.9
RUNX3-204ENST00000479341 KRTAP9-6A0A140TA67 174 aa9.44□□□□□ -0.9
RUNX3-204ENST00000479341 C5orf47Q569G3 176 aa9.44□□□□□ -0.9
RUNX3-204ENST00000479341 SMIM20Q8N5G0 67 aa9.43□□□□□ -0.9
RUNX3-204ENST00000479341 TRAV7A0A075B6U4 112 aa9.42□□□□□ -0.9
RUNX3-204ENST00000479341 LOC101927531A0A1B0GV80 90 aa9.42□□□□□ -0.9
RUNX3-204ENST00000479341 CYP4F30PQ9H0H9 118 aa9.42□□□□□ -0.9
RUNX3-204ENST00000479341 RBM12B-AS1Q9P1G2 102 aa9.41□□□□□ -0.9
RUNX3-204ENST00000479341 MP68P56378 58 aa9.4□□□□□ -0.9
RUNX3-204ENST00000479341 COX6B2Q6YFQ2 88 aa9.38□□□□□ -0.91
RUNX3-204ENST00000479341 C1orf64Q8NEQ6 169 aa9.38□□□□□ -0.91
RUNX3-204ENST00000479341 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
RUNX3-204ENST00000479341 H3BPC8 53 aa9.36□□□□□ -0.91
RUNX3-204ENST00000479341 FAM236DA0A1B0GTK5 79 aa9.33□□□□□ -0.92
RUNX3-204ENST00000479341 FAM236CP0DP71 79 aa9.33□□□□□ -0.92
RUNX3-204ENST00000479341 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
RUNX3-204ENST00000479341 SERP2Q8N6R1 65 aa9.3□□□□□ -0.92
RUNX3-204ENST00000479341 MT1HP80294 61 aa9.28□□□□□ -0.92
RUNX3-204ENST00000479341 KLKP1Q107X0 134 aa9.26□□□□□ -0.93
RUNX3-204ENST00000479341 KRTAP3-1Q9BYR8 98 aa9.23□□□□□ -0.93
RUNX3-204ENST00000479341 H1FX-AS1Q4G0G2 97 aa9.21□□□□□ -0.94
RUNX3-204ENST00000479341 FLGP20930 4061 aaPredicted RBP9.2□□□□□ -0.94
RUNX3-204ENST00000479341 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
RUNX3-204ENST00000479341 COX7CP15954 63 aa9.17□□□□□ -0.94
RUNX3-204ENST00000479341 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
RUNX3-204ENST00000479341 SNURFQ9Y675 71 aa9.15□□□□□ -0.94
RUNX3-204ENST00000479341 ANAPC13Q9BS18 74 aa9.12□□□□□ -0.95
RUNX3-204ENST00000479341 M0R2T5 61 aa9.1□□□□□ -0.95
RUNX3-204ENST00000479341 CRCT1Q9UGL9 99 aa9.1□□□□□ -0.95
RUNX3-204ENST00000479341 FSIP2Q5CZC0 6907 aa9.09□□□□□ -0.95
RUNX3-204ENST00000479341 A8MUN3 132 aa9.05□□□□□ -0.96
RUNX3-204ENST00000479341 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
RUNX3-204ENST00000479341 DMAC1Q96GE9 116 aa9□□□□□ -0.97
RUNX3-204ENST00000479341 S4R3F8 94 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms