RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 HECTD4Q9Y4D8 3996 aa8.15□□□□□ -1.1
CNKSR3-204ENST00000479339 MMP24-AS1A0A0U1RRL7 71 aa8.15□□□□□ -1.11
CNKSR3-204ENST00000479339 LINC00472Q9H8W2 130 aa8.15□□□□□ -1.11
CNKSR3-204ENST00000479339 HRES1P13985 223 aa8.13□□□□□ -1.11
CNKSR3-204ENST00000479339 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
CNKSR3-204ENST00000479339 C1orf134Q5TEV5 83 aa8.12□□□□□ -1.11
CNKSR3-204ENST00000479339 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
CNKSR3-204ENST00000479339 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
CNKSR3-204ENST00000479339 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
CNKSR3-204ENST00000479339 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
CNKSR3-204ENST00000479339 A0A0G2JQZ4 141 aa8.1□□□□□ -1.11
CNKSR3-204ENST00000479339 A0A1W2PNN7 141 aa8.1□□□□□ -1.11
CNKSR3-204ENST00000479339 FAM168BA1KXE4 195 aa8.1□□□□□ -1.11
CNKSR3-204ENST00000479339 LINC01556Q5JQF7 62 aa8.09□□□□□ -1.11
CNKSR3-204ENST00000479339 IGKV2-24A0A0C4DH68 120 aa8.08□□□□□ -1.12
CNKSR3-204ENST00000479339 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
CNKSR3-204ENST00000479339 H0Y9J4 135 aa8.07□□□□□ -1.12
CNKSR3-204ENST00000479339 HERC2O95714 4834 aa8.05□□□□□ -1.12
CNKSR3-204ENST00000479339 SPRR1BP22528 89 aa8.05□□□□□ -1.12
CNKSR3-204ENST00000479339 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
CNKSR3-204ENST00000479339 DYNC1H1Q14204 4646 aaKnown RBP8.03□□□□□ -1.12
CNKSR3-204ENST00000479339 PKD1P98161 4303 aa8.03□□□□□ -1.12
CNKSR3-204ENST00000479339 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
CNKSR3-204ENST00000479339 ADM2Q7Z4H4 148 aa8.02□□□□□ -1.13
CNKSR3-204ENST00000479339 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
CNKSR3-204ENST00000479339 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
CNKSR3-204ENST00000479339 PKHD1P08F94 4074 aa7.99□□□□□ -1.13
CNKSR3-204ENST00000479339 PRLHP81277 87 aa7.98□□□□□ -1.13
CNKSR3-204ENST00000479339 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
CNKSR3-204ENST00000479339 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
CNKSR3-204ENST00000479339 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
CNKSR3-204ENST00000479339 KIAA1109Q2LD37 5005 aa7.97□□□□□ -1.13
CNKSR3-204ENST00000479339 ACYP2P14621 99 aa7.96□□□□□ -1.13
CNKSR3-204ENST00000479339 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.13
CNKSR3-204ENST00000479339 KRTAP17-1Q9BYP8 105 aa7.95□□□□□ -1.14
CNKSR3-204ENST00000479339 CDK2AP2O75956 126 aa7.93□□□□□ -1.14
CNKSR3-204ENST00000479339 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
CNKSR3-204ENST00000479339 A0A1B0GU69 56 aa7.92□□□□□ -1.14
CNKSR3-204ENST00000479339 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
CNKSR3-204ENST00000479339 Q96NJ1 140 aa7.91□□□□□ -1.14
CNKSR3-204ENST00000479339 A0A1B0GVX0 72 aa7.9□□□□□ -1.14
CNKSR3-204ENST00000479339 UQCR11O14957 56 aa7.9□□□□□ -1.15
CNKSR3-204ENST00000479339 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.15
CNKSR3-204ENST00000479339 RYR1P21817 5038 aa7.89□□□□□ -1.15
CNKSR3-204ENST00000479339 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
CNKSR3-204ENST00000479339 A0A087WTM6 91 aa7.87□□□□□ -1.15
CNKSR3-204ENST00000479339 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
CNKSR3-204ENST00000479339 DMAC1Q96GE9 116 aa7.86□□□□□ -1.15
CNKSR3-204ENST00000479339 HSPG2P98160 4391 aa7.86□□□□□ -1.15
CNKSR3-204ENST00000479339 IGHV6-1A0A0B4J1U7 121 aa7.84□□□□□ -1.15
CNKSR3-204ENST00000479339 KRTAP4-5Q9BYR2 181 aa7.84□□□□□ -1.15
CNKSR3-204ENST00000479339 DNAH5Q8TE73 4624 aa7.83□□□□□ -1.16
CNKSR3-204ENST00000479339 APOBP04114 4563 aaKnown RBP7.82□□□□□ -1.16
CNKSR3-204ENST00000479339 A0A096LNI7 61 aa7.82□□□□□ -1.16
CNKSR3-204ENST00000479339 Q8N1X5 172 aa7.82□□□□□ -1.16
CNKSR3-204ENST00000479339 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
CNKSR3-204ENST00000479339 KRTAP10-1P60331 282 aa7.79□□□□□ -1.16
CNKSR3-204ENST00000479339 PCLOQ9Y6V0 5065 aa7.78□□□□□ -1.16
CNKSR3-204ENST00000479339 IGLV5-52A0A0A0MRZ9 124 aa7.76□□□□□ -1.17
CNKSR3-204ENST00000479339 ZNF861PO60384 105 aa7.75□□□□□ -1.17
CNKSR3-204ENST00000479339 ABCA13Q86UQ4 5058 aa7.74□□□□□ -1.17
CNKSR3-204ENST00000479339 Q5W150 140 aa7.73□□□□□ -1.17
CNKSR3-204ENST00000479339 KRTAP13-1Q8IUC0 172 aa7.72□□□□□ -1.17
CNKSR3-204ENST00000479339 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.17
CNKSR3-204ENST00000479339 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
CNKSR3-204ENST00000479339 IGLV9-49A0A0B4J1Y8 123 aa7.69□□□□□ -1.18
CNKSR3-204ENST00000479339 Q5VSD8 79 aa7.68□□□□□ -1.18
CNKSR3-204ENST00000479339 Q6ZSA8 131 aa7.68□□□□□ -1.18
CNKSR3-204ENST00000479339 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
CNKSR3-204ENST00000479339 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
CNKSR3-204ENST00000479339 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
CNKSR3-204ENST00000479339 ROMO1P60602 79 aa7.67□□□□□ -1.18
CNKSR3-204ENST00000479339 ZNF706Q9Y5V0 76 aaPredicted RBP7.67□□□□□ -1.18
CNKSR3-204ENST00000479339 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
CNKSR3-204ENST00000479339 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
CNKSR3-204ENST00000479339 VPS13BQ7Z7G8 4022 aa7.66□□□□□ -1.18
CNKSR3-204ENST00000479339 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
CNKSR3-204ENST00000479339 SMR3BP02814 79 aaPredicted RBP7.65□□□□□ -1.18
CNKSR3-204ENST00000479339 KRTAP25-1Q3LHN0 102 aa7.65□□□□□ -1.18
CNKSR3-204ENST00000479339 FAT1Q14517 4588 aa7.62□□□□□ -1.19
CNKSR3-204ENST00000479339 IGKV2-30P06310 120 aa7.62□□□□□ -1.19
CNKSR3-204ENST00000479339 J3QL48 77 aa7.61□□□□□ -1.19
CNKSR3-204ENST00000479339 A8MUU9 505 aa7.56□□□□□ -1.2
CNKSR3-204ENST00000479339 CIRBP-AS1Q8TBR5 109 aa7.55□□□□□ -1.2
CNKSR3-204ENST00000479339 SPINK6Q6UWN8 80 aa7.52□□□□□ -1.21
CNKSR3-204ENST00000479339 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
CNKSR3-204ENST00000479339 SRRM2Q9UQ35 2752 aaKnown RBP7.5□□□□□ -1.21
CNKSR3-204ENST00000479339 IGKV2D-30A0A075B6S6 120 aa7.49□□□□□ -1.21
CNKSR3-204ENST00000479339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.49□□□□□ -1.21
CNKSR3-204ENST00000479339 PANO1I0J062 215 aa7.47□□□□□ -1.21
CNKSR3-204ENST00000479339 LINC00304Q8N9R0 145 aa7.47□□□□□ -1.21
CNKSR3-204ENST00000479339 FLG2Q5D862 2391 aaPredicted RBP7.47□□□□□ -1.21
CNKSR3-204ENST00000479339 MYCBP2O75592 4640 aa7.46□□□□□ -1.22
CNKSR3-204ENST00000479339 SPACA4Q8TDM5 124 aa7.44□□□□□ -1.22
CNKSR3-204ENST00000479339 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
CNKSR3-204ENST00000479339 H0YAA0 97 aa7.42□□□□□ -1.22
CNKSR3-204ENST00000479339 HERC1Q15751 4861 aa7.42□□□□□ -1.22
CNKSR3-204ENST00000479339 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
CNKSR3-204ENST00000479339 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.23
CNKSR3-204ENST00000479339 P0C880 135 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms