RNA–Protein interactions for RNA: ENST00000478776.1

VLDLR-204, Transcript of very low density lipoprotein receptor, humanhuman

TSL 3

Gene VLDLR, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-204ENST00000478776 CCDC180Q9P1Z9 1646 aa-0.25□□□□□ -2.45
VLDLR-204ENST00000478776 FAT3Q8TDW7 4589 aa-0.25□□□□□ -2.45
VLDLR-204ENST00000478776 HERC2O95714 4834 aa-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 LINC01549A6NIU2 74 aa-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 RPS27P42677 84 aaKnown RBP-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 WT1-ASQ06250 92 aa-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 RPS27LQ71UM5 84 aaKnown RBP-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 DMXL1Q9Y485 3027 aa-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 SPG11Q96JI7 2443 aa-0.26□□□□□ -2.45
VLDLR-204ENST00000478776 MT1AP04731 61 aa-0.27□□□□□ -2.45
VLDLR-204ENST00000478776 DNAH9Q9NYC9 4486 aa-0.27□□□□□ -2.45
VLDLR-204ENST00000478776 HERC1Q15751 4861 aa-0.27□□□□□ -2.45
VLDLR-204ENST00000478776 CEP290O15078 2479 aa-0.27□□□□□ -2.45
VLDLR-204ENST00000478776 HTTP42858 3142 aa-0.27□□□□□ -2.45
VLDLR-204ENST00000478776 CUBNO60494 3623 aa-0.28□□□□□ -2.45
VLDLR-204ENST00000478776 A0A087WWC5 75 aa-0.28□□□□□ -2.45
VLDLR-204ENST00000478776 TOGARAM1Q9Y4F4 1720 aa-0.28□□□□□ -2.45
VLDLR-204ENST00000478776 ABCA6Q8N139 1617 aa-0.28□□□□□ -2.45
VLDLR-204ENST00000478776 ANKRD11Q6UB99 2663 aaPredicted RBP-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 TEP1Q99973 2627 aaKnown RBP-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 LAMA5O15230 3695 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 MXRA5Q9NR99 2828 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 AKAP9Q99996 3911 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 SPRR2FQ96RM1 72 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 C6orf48Q9UBA6 75 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 GCN1Q92616 2671 aaKnown RBP-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 CLASP1Q7Z460 1538 aa-0.29□□□□□ -2.46
VLDLR-204ENST00000478776 LY75O60449 1722 aa-0.3□□□□□ -2.46
VLDLR-204ENST00000478776 PKHD1L1Q86WI1 4243 aa-0.3□□□□□ -2.46
VLDLR-204ENST00000478776 PKD1L2Q7Z442 2459 aa-0.3□□□□□ -2.46
VLDLR-204ENST00000478776 K7EMI3 77 aa-0.3□□□□□ -2.46
VLDLR-204ENST00000478776 FAT1Q14517 4588 aa-0.3□□□□□ -2.46
VLDLR-204ENST00000478776 TACC2O95359 2948 aa-0.31□□□□□ -2.46
VLDLR-204ENST00000478776 ANK3Q12955 4377 aaKnown RBP-0.31□□□□□ -2.46
VLDLR-204ENST00000478776 EPG5Q9HCE0 2579 aa-0.31□□□□□ -2.46
VLDLR-204ENST00000478776 STARD9Q9P2P6 4700 aa-0.31□□□□□ -2.46
VLDLR-204ENST00000478776 NBPF19A0A087WUL8 3843 aa-0.31□□□□□ -2.46
VLDLR-204ENST00000478776 CROCC2H7BZ55 1655 aa-0.32□□□□□ -2.46
VLDLR-204ENST00000478776 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.32□□□□□ -2.46
VLDLR-204ENST00000478776 NBEAL2Q6ZNJ1 2754 aa-0.32□□□□□ -2.46
VLDLR-204ENST00000478776 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
VLDLR-204ENST00000478776 TIAM1Q13009 1591 aa-0.32□□□□□ -2.46
VLDLR-204ENST00000478776 CDC42BPAQ5VT25 1732 aa-0.33□□□□□ -2.46
VLDLR-204ENST00000478776 MTORP42345 2549 aa-0.33□□□□□ -2.46
VLDLR-204ENST00000478776 SACSQ9NZJ4 4579 aa-0.33□□□□□ -2.46
VLDLR-204ENST00000478776 FCER1GP30273 86 aa-0.33□□□□□ -2.46
VLDLR-204ENST00000478776 NCBP2-AS2Q69YL0 99 aa-0.33□□□□□ -2.46
VLDLR-204ENST00000478776 DNAH3Q8TD57 4116 aa-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 KALRNO60229 2985 aa-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 H3BUA1 57 aa-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 APOBP04114 4563 aaKnown RBP-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 GLI2P10070 1586 aa-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 FASNP49327 2511 aaKnown RBP-0.34□□□□□ -2.46
VLDLR-204ENST00000478776 KRTAP19-8Q3LI54 63 aa-0.35□□□□□ -2.47
VLDLR-204ENST00000478776 ABCA10Q8WWZ4 1543 aa-0.35□□□□□ -2.47
VLDLR-204ENST00000478776 SMIM31A0A1B0GVY4 71 aa-0.36□□□□□ -2.47
VLDLR-204ENST00000478776 M0R1W7 72 aa-0.36□□□□□ -2.47
VLDLR-204ENST00000478776 SERF2P84101 59 aa-0.36□□□□□ -2.47
VLDLR-204ENST00000478776 RIF1Q5UIP0 2472 aaKnown RBP-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 NBEAQ8NFP9 2946 aa-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 LRRK2Q5S007 2527 aa-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 IGLV5-48A0A075B6I7 105 aa-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 NMES1Q9C002 83 aa-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 DNHD1Q96M86 4753 aa-0.37□□□□□ -2.47
VLDLR-204ENST00000478776 LAMA1P25391 3075 aa-0.38□□□□□ -2.47
VLDLR-204ENST00000478776 SFTA3P0C7M3 94 aa-0.38□□□□□ -2.47
VLDLR-204ENST00000478776 ALS2Q96Q42 1657 aa-0.38□□□□□ -2.47
VLDLR-204ENST00000478776 UTP20O75691 2785 aaKnown RBP-0.39□□□□□ -2.47
VLDLR-204ENST00000478776 DEFB110Q30KQ9 67 aa-0.39□□□□□ -2.47
VLDLR-204ENST00000478776 S100ZQ8WXG8 99 aa-0.39□□□□□ -2.47
VLDLR-204ENST00000478776 FAM186AA6NE01 2351 aa-0.39□□□□□ -2.47
VLDLR-204ENST00000478776 MUC17Q685J3 4493 aa-0.39□□□□□ -2.47
VLDLR-204ENST00000478776 COL6A5A8TX70 2615 aa-0.4□□□□□ -2.47
VLDLR-204ENST00000478776 VPS13DQ5THJ4 4388 aa-0.4□□□□□ -2.47
VLDLR-204ENST00000478776 IGIPA6NJ69 53 aa-0.4□□□□□ -2.47
VLDLR-204ENST00000478776 KRTAP20-2Q3LI61 65 aa-0.4□□□□□ -2.47
VLDLR-204ENST00000478776 NOP10Q9NPE3 64 aaKnown RBP-0.4□□□□□ -2.47
VLDLR-204ENST00000478776 ERICH3Q5RHP9 1530 aa-0.41□□□□□ -2.48
VLDLR-204ENST00000478776 EEA1Q15075 1411 aa-0.41□□□□□ -2.48
VLDLR-204ENST00000478776 MYO18BQ8IUG5 2567 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 DNAH11Q96DT5 4516 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 COL12A1Q99715 3063 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 ITPR3Q14573 2671 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 MMP24-AS1A0A0U1RRL7 71 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 MT4P47944 62 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 SMIM5Q71RC9 77 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 TMEM167BQ9NRX6 74 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 UGGT1Q9NYU2 1555 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 MAST1Q9Y2H9 1570 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 BIRC6Q9NR09 4857 aa-0.42□□□□□ -2.48
VLDLR-204ENST00000478776 CPS1P31327 1500 aa-0.43□□□□□ -2.48
VLDLR-204ENST00000478776 DNAH2Q9P225 4427 aa-0.43□□□□□ -2.48
VLDLR-204ENST00000478776 USP9YO00507 2555 aaPredicted RBP-0.43□□□□□ -2.48
VLDLR-204ENST00000478776 ACACBO00763 2458 aa-0.44□□□□□ -2.48
VLDLR-204ENST00000478776 WDR87Q6ZQQ6 2873 aa-0.44□□□□□ -2.48
VLDLR-204ENST00000478776 ACACAQ13085 2346 aa-0.44□□□□□ -2.48
VLDLR-204ENST00000478776 A0A1B0GUL6 1792 aa-0.45□□□□□ -2.48
VLDLR-204ENST00000478776 RANBP2P49792 3224 aaKnown RBP-0.45□□□□□ -2.48
VLDLR-204ENST00000478776 MGAM2Q2M2H8 2515 aa-0.45□□□□□ -2.48
VLDLR-204ENST00000478776 PRXQ9BXM0 1461 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms