RNA–Protein interactions for RNA: ENST00000477909.5

NXPE3-203, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,450 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-203ENST00000477909 LINC01558Q9Y6Z2 57 aa4.48□□□□□ -1.69
NXPE3-203ENST00000477909 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
NXPE3-203ENST00000477909 FAT2Q9NYQ8 4349 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 A0A087WTM6 91 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 IGLV9-49A0A0B4J1Y8 123 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 LINC00313P59037 77 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
NXPE3-203ENST00000477909 H0Y9J4 135 aa4.46□□□□□ -1.7
NXPE3-203ENST00000477909 DNAH5Q8TE73 4624 aa4.46□□□□□ -1.7
NXPE3-203ENST00000477909 SPRR1BP22528 89 aa4.46□□□□□ -1.7
NXPE3-203ENST00000477909 KRTAP13-1Q8IUC0 172 aa4.46□□□□□ -1.7
NXPE3-203ENST00000477909 A8MWP4 228 aa4.45□□□□□ -1.7
NXPE3-203ENST00000477909 ANAPC11Q9NYG5 84 aa4.45□□□□□ -1.7
NXPE3-203ENST00000477909 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
NXPE3-203ENST00000477909 RTL8CO15255 209 aa4.45□□□□□ -1.7
NXPE3-203ENST00000477909 TGP01266 2768 aa4.44□□□□□ -1.7
NXPE3-203ENST00000477909 H3BS24 57 aa4.44□□□□□ -1.7
NXPE3-203ENST00000477909 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
NXPE3-203ENST00000477909 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
NXPE3-203ENST00000477909 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
NXPE3-203ENST00000477909 Q6ZR54 194 aa4.42□□□□□ -1.7
NXPE3-203ENST00000477909 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
NXPE3-203ENST00000477909 HRES1P13985 223 aa4.42□□□□□ -1.7
NXPE3-203ENST00000477909 LY6G6CO95867 125 aa4.41□□□□□ -1.7
NXPE3-203ENST00000477909 IGLV5-52A0A0A0MRZ9 124 aa4.4□□□□□ -1.71
NXPE3-203ENST00000477909 LINC01554Q52M75 96 aa4.4□□□□□ -1.71
NXPE3-203ENST00000477909 PKHD1L1Q86WI1 4243 aa4.39□□□□□ -1.71
NXPE3-203ENST00000477909 C1orf134Q5TEV5 83 aa4.39□□□□□ -1.71
NXPE3-203ENST00000477909 PRR26Q8N8Z3 221 aa4.38□□□□□ -1.71
NXPE3-203ENST00000477909 Q96NJ1 140 aa4.38□□□□□ -1.71
NXPE3-203ENST00000477909 WWC2-AS2Q96NR7 200 aa4.38□□□□□ -1.71
NXPE3-203ENST00000477909 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
NXPE3-203ENST00000477909 LINC00483Q53H64 154 aa4.37□□□□□ -1.71
NXPE3-203ENST00000477909 ZNF861PO60384 105 aa4.37□□□□□ -1.71
NXPE3-203ENST00000477909 HYDINQ4G0P3 5121 aa4.36□□□□□ -1.71
NXPE3-203ENST00000477909 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
NXPE3-203ENST00000477909 KRTAP10-2P60368 255 aa4.36□□□□□ -1.71
NXPE3-203ENST00000477909 IGHV6-1A0A0B4J1U7 121 aa4.34□□□□□ -1.71
NXPE3-203ENST00000477909 C8orf17Q9NRJ1 99 aa4.34□□□□□ -1.71
NXPE3-203ENST00000477909 PKHD1P08F94 4074 aa4.34□□□□□ -1.71
NXPE3-203ENST00000477909 ZNF706Q9Y5V0 76 aaPredicted RBP4.34□□□□□ -1.71
NXPE3-203ENST00000477909 A0A087X002 238 aa4.34□□□□□ -1.72
NXPE3-203ENST00000477909 NOTCH2NLQ7Z3S9 236 aa4.34□□□□□ -1.72
NXPE3-203ENST00000477909 IGLV7-43P04211 117 aa4.33□□□□□ -1.72
NXPE3-203ENST00000477909 SPINK6Q6UWN8 80 aa4.33□□□□□ -1.72
NXPE3-203ENST00000477909 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
NXPE3-203ENST00000477909 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
NXPE3-203ENST00000477909 ASB16-AS1Q495Z4 193 aa4.31□□□□□ -1.72
NXPE3-203ENST00000477909 LRP1BQ9NZR2 4599 aa4.3□□□□□ -1.72
NXPE3-203ENST00000477909 A0A1B0GU69 56 aa4.3□□□□□ -1.72
NXPE3-203ENST00000477909 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
NXPE3-203ENST00000477909 A0A1B0GVX0 72 aa4.3□□□□□ -1.72
NXPE3-203ENST00000477909 MRPL34Q9BQ48 92 aaKnown RBP4.3□□□□□ -1.72
NXPE3-203ENST00000477909 ACYP2P14621 99 aa4.29□□□□□ -1.72
NXPE3-203ENST00000477909 KRTAP10-1P60331 282 aa4.29□□□□□ -1.72
NXPE3-203ENST00000477909 CSAG1Q6PB30 78 aa4.29□□□□□ -1.72
NXPE3-203ENST00000477909 RETNLBQ9BQ08 111 aa4.29□□□□□ -1.72
NXPE3-203ENST00000477909 Q6ZSA8 131 aa4.28□□□□□ -1.72
NXPE3-203ENST00000477909 MIR22HGQ0VDD5 57 aa4.27□□□□□ -1.73
NXPE3-203ENST00000477909 SPATA8Q6RVD6 105 aa4.27□□□□□ -1.73
NXPE3-203ENST00000477909 Q5W150 140 aa4.26□□□□□ -1.73
NXPE3-203ENST00000477909 VPS13BQ7Z7G8 4022 aa4.25□□□□□ -1.73
NXPE3-203ENST00000477909 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
NXPE3-203ENST00000477909 APOBP04114 4563 aaKnown RBP4.25□□□□□ -1.73
NXPE3-203ENST00000477909 UQCR11O14957 56 aa4.24□□□□□ -1.73
NXPE3-203ENST00000477909 SSBP3-AS1Q7Z2R9 100 aa4.22□□□□□ -1.73
NXPE3-203ENST00000477909 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
NXPE3-203ENST00000477909 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
NXPE3-203ENST00000477909 RYR2Q92736 4967 aa4.2□□□□□ -1.74
NXPE3-203ENST00000477909 KRTAP13-3Q3SY46 172 aa4.2□□□□□ -1.74
NXPE3-203ENST00000477909 KRTAP1-4P0C5Y4 121 aa4.19□□□□□ -1.74
NXPE3-203ENST00000477909 SMR3BP02814 79 aaPredicted RBP4.16□□□□□ -1.74
NXPE3-203ENST00000477909 A0A1B0GVY2 172 aa4.14□□□□□ -1.75
NXPE3-203ENST00000477909 TYMSOSQ8TAI1 123 aa4.14□□□□□ -1.75
NXPE3-203ENST00000477909 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
NXPE3-203ENST00000477909 FAT1Q14517 4588 aa4.12□□□□□ -1.75
NXPE3-203ENST00000477909 FAM229AH3BQW9 127 aa4.12□□□□□ -1.75
NXPE3-203ENST00000477909 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
NXPE3-203ENST00000477909 HSPG2P98160 4391 aa4.12□□□□□ -1.75
NXPE3-203ENST00000477909 TNXBP22105 4242 aa4.11□□□□□ -1.75
NXPE3-203ENST00000477909 SPINK1P00995 79 aa4.11□□□□□ -1.75
NXPE3-203ENST00000477909 ROMO1P60602 79 aa4.11□□□□□ -1.75
NXPE3-203ENST00000477909 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
NXPE3-203ENST00000477909 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
NXPE3-203ENST00000477909 KRTAP10-4P60372 401 aaPredicted RBP4.09□□□□□ -1.75
NXPE3-203ENST00000477909 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
NXPE3-203ENST00000477909 LINC00304Q8N9R0 145 aa4.07□□□□□ -1.76
NXPE3-203ENST00000477909 A8MUU9 505 aa4.07□□□□□ -1.76
NXPE3-203ENST00000477909 FAT3Q8TDW7 4589 aa4.06□□□□□ -1.76
NXPE3-203ENST00000477909 KMT2CQ8NEZ4 4911 aaKnown RBP4.05□□□□□ -1.76
NXPE3-203ENST00000477909 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
NXPE3-203ENST00000477909 C9orf92A6NGG3 77 aa4.04□□□□□ -1.76
NXPE3-203ENST00000477909 H0YAA0 97 aa4.04□□□□□ -1.76
NXPE3-203ENST00000477909 Q8N1X5 172 aa4.03□□□□□ -1.76
NXPE3-203ENST00000477909 FLG2Q5D862 2391 aaPredicted RBP4.01□□□□□ -1.77
NXPE3-203ENST00000477909 P0C880 135 aa4.01□□□□□ -1.77
NXPE3-203ENST00000477909 RYR3Q15413 4870 aa3.99□□□□□ -1.77
NXPE3-203ENST00000477909 A0A1B0GU33 70 aa3.98□□□□□ -1.77
NXPE3-203ENST00000477909 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms