RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SSBP3-AS1Q7Z2R9 100 aa1.06□□□□□ -2.24
SMNDC1-205ENST00000477763 WFDC9Q8NEX5 89 aa1.06□□□□□ -2.24
SMNDC1-205ENST00000477763 HILPDAQ9Y5L2 63 aa1.06□□□□□ -2.24
SMNDC1-205ENST00000477763 HERC2O95714 4834 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 ABCA1O95477 2261 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 DYNC2H1Q8NCM8 4307 aaKnown RBP1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 ZANQ9Y493 2812 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 SACSQ9NZJ4 4579 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 C3orf79P0CE67 100 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 HMGA1P17096 107 aaKnown RBP1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 DEFB112Q30KQ8 113 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 SPINK9Q5DT21 86 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 ABCA13Q86UQ4 5058 aa1.05□□□□□ -2.24
SMNDC1-205ENST00000477763 PRKDCP78527 4128 aaKnown RBP1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 CACNA1CQ13936 2221 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 MEGF8Q7Z7M0 2845 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 LCE6AA0A183 80 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 LINC00959A0A1B0GUT2 108 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 GAFA1Q96PS6 74 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 U3KQA8 63 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 CUBNO60494 3623 aa1.04□□□□□ -2.24
SMNDC1-205ENST00000477763 DNAH1Q9P2D7 4330 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 ANK2Q01484 3957 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 CADP27708 2225 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 DNAH9Q9NYC9 4486 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 FXYD6-FXYD2A0A087WZ82 144 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 RPL38P63173 70 aaKnown RBP1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 ATXN8Q156A1 80 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 DEFB109BQ30KR1 87 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 FXYD6Q9H0Q3 95 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 TRRAPQ9Y4A5 3859 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 KIAA1109Q2LD37 5005 aa1.03□□□□□ -2.24
SMNDC1-205ENST00000477763 WNK1Q9H4A3 2382 aa1.03□□□□□ -2.25
SMNDC1-205ENST00000477763 SVEP1Q4LDE5 3571 aa1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 A0A0D9SFI3 127 aa1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 DNAJC13O75165 2243 aa1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 NREPQ16612 68 aa1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 FAM103A1Q9BTL3 118 aaKnown RBP1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 PLECQ15149 4684 aaKnown RBP1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 DNAH10Q8IVF4 4471 aa1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 NSD1Q96L73 2696 aaPredicted RBP1.02□□□□□ -2.25
SMNDC1-205ENST00000477763 TENM2Q9NT68 2774 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 SNRPGP15A8MWD9 76 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 COX7BP24311 80 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 HERC1Q15751 4861 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 VWFP04275 2813 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 TENM3Q9P273 2699 aa1.01□□□□□ -2.25
SMNDC1-205ENST00000477763 RNF213Q63HN8 5207 aa1□□□□□ -2.25
SMNDC1-205ENST00000477763 DEFB133Q30KQ1 61 aa1□□□□□ -2.25
SMNDC1-205ENST00000477763 CNFNQ9BYD5 112 aa1□□□□□ -2.25
SMNDC1-205ENST00000477763 C10orf95Q9H7T3 257 aa1□□□□□ -2.25
SMNDC1-205ENST00000477763 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
SMNDC1-205ENST00000477763 HRNRQ86YZ3 2850 aaPredicted RBP0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 SPTY2D1-AS1A0A0U1RR47 76 aa0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 I3L2K1 104 aa0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 PIGYQ3MUY2 71 aa0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 TP53AIP1Q9HCN2 124 aa0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 USF3Q68DE3 2245 aa0.99□□□□□ -2.25
SMNDC1-205ENST00000477763 NCBP2-AS2Q69YL0 99 aa0.98□□□□□ -2.25
SMNDC1-205ENST00000477763 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
SMNDC1-205ENST00000477763 DYNC1H1Q14204 4646 aaKnown RBP0.98□□□□□ -2.25
SMNDC1-205ENST00000477763 DNAH17Q9UFH2 4485 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 A0A0D9SG42 100 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 CPSF4LA6NMK7 179 aaKnown RBP0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 COX6B1P14854 86 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 COX6A2Q02221 97 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 TOMM5Q8N4H5 51 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 USMG5Q96IX5 58 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 HECTD4Q9Y4D8 3996 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 DNAH3Q8TD57 4116 aa0.97□□□□□ -2.25
SMNDC1-205ENST00000477763 COL7A1Q02388 2944 aa0.96□□□□□ -2.26
SMNDC1-205ENST00000477763 LINC01549A6NIU2 74 aa0.96□□□□□ -2.26
SMNDC1-205ENST00000477763 I3L3M4 83 aa0.96□□□□□ -2.26
SMNDC1-205ENST00000477763 CRIPTQ9P021 101 aa0.96□□□□□ -2.26
SMNDC1-205ENST00000477763 HUWE1Q7Z6Z7 4374 aaKnown RBP0.96□□□□□ -2.26
SMNDC1-205ENST00000477763 K7EMI3 77 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 NDUFA4O00483 81 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 UBL5Q9BZL1 73 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 PRO0255Q9UI72 69 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 PLCE1Q9P212 2302 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 CSMD3Q7Z407 3707 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 SRRM2Q9UQ35 2752 aaKnown RBP0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 STAB2Q8WWQ8 2551 aa0.95□□□□□ -2.26
SMNDC1-205ENST00000477763 DNAH7Q8WXX0 4024 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 K7EQZ3 153 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 PRH1P02810 166 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 TFF3Q07654 80 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 ENHOQ6UWT2 76 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 NMES1Q9C002 83 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 CMC2Q9NRP2 79 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 FRAS1Q86XX4 4008 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 DNAH11Q96DT5 4516 aa0.94□□□□□ -2.26
SMNDC1-205ENST00000477763 DNAH2Q9P225 4427 aa0.93□□□□□ -2.26
SMNDC1-205ENST00000477763 Q8IZM0 81 aa0.93□□□□□ -2.26
SMNDC1-205ENST00000477763 LYSTQ99698 3801 aa0.93□□□□□ -2.26
SMNDC1-205ENST00000477763 VPS13DQ5THJ4 4388 aa0.93□□□□□ -2.26
SMNDC1-205ENST00000477763 STARD9Q9P2P6 4700 aa0.92□□□□□ -2.26
SMNDC1-205ENST00000477763 STATHP02808 62 aa0.92□□□□□ -2.26
SMNDC1-205ENST00000477763 FCER1GP30273 86 aa0.92□□□□□ -2.26
SMNDC1-205ENST00000477763 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms