RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 DNAH5Q8TE73 4624 aa4.72□□□□□ -1.65
VMA21-203ENST00000477649 A0A0G2JQZ4 141 aa4.71□□□□□ -1.66
VMA21-203ENST00000477649 K7EQZ3 153 aa4.71□□□□□ -1.66
VMA21-203ENST00000477649 Q5XG85 94 aa4.71□□□□□ -1.66
VMA21-203ENST00000477649 Q8N9L7 120 aa4.71□□□□□ -1.66
VMA21-203ENST00000477649 FAT2Q9NYQ8 4349 aa4.7□□□□□ -1.66
VMA21-203ENST00000477649 NDUFC1O43677 76 aa4.7□□□□□ -1.66
VMA21-203ENST00000477649 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
VMA21-203ENST00000477649 OCR1Q9BZK8 76 aa4.69□□□□□ -1.66
VMA21-203ENST00000477649 KIAA1109Q2LD37 5005 aa4.68□□□□□ -1.66
VMA21-203ENST00000477649 KLKP1Q107X0 134 aa4.68□□□□□ -1.66
VMA21-203ENST00000477649 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
VMA21-203ENST00000477649 ANAPC11Q9NYG5 84 aa4.68□□□□□ -1.66
VMA21-203ENST00000477649 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
VMA21-203ENST00000477649 C5orf47Q569G3 176 aa4.67□□□□□ -1.66
VMA21-203ENST00000477649 Q96NJ1 140 aa4.67□□□□□ -1.66
VMA21-203ENST00000477649 PKD1P98161 4303 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
VMA21-203ENST00000477649 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
VMA21-203ENST00000477649 KRTAP1-4P0C5Y4 121 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 TMEM258P61165 79 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 SPAG11AQ6PDA7 123 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 HRCT1Q6UXD1 115 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
VMA21-203ENST00000477649 A0A1B0GVX0 72 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 C8orf87E5RJ46 101 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 H3BPC8 53 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 SPINK1P00995 79 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 C20orf197Q8N268 126 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 TP53AIP1Q9HCN2 124 aa4.65□□□□□ -1.67
VMA21-203ENST00000477649 A0A087X002 238 aa4.64□□□□□ -1.67
VMA21-203ENST00000477649 KRTAP13-2Q52LG2 175 aa4.64□□□□□ -1.67
VMA21-203ENST00000477649 TYMSOSQ8TAI1 123 aa4.64□□□□□ -1.67
VMA21-203ENST00000477649 TMEM254Q8TBM7 123 aa4.64□□□□□ -1.67
VMA21-203ENST00000477649 ABCA13Q86UQ4 5058 aa4.63□□□□□ -1.67
VMA21-203ENST00000477649 MMP24-AS1A0A0U1RRL7 71 aa4.63□□□□□ -1.67
VMA21-203ENST00000477649 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
VMA21-203ENST00000477649 PKHD1P08F94 4074 aa4.63□□□□□ -1.67
VMA21-203ENST00000477649 MP68P56378 58 aa4.62□□□□□ -1.67
VMA21-203ENST00000477649 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
VMA21-203ENST00000477649 WFDC13Q8IUB5 93 aa4.62□□□□□ -1.67
VMA21-203ENST00000477649 C8orf17Q9NRJ1 99 aa4.62□□□□□ -1.67
VMA21-203ENST00000477649 A0A0U1RQV1 116 aa4.61□□□□□ -1.67
VMA21-203ENST00000477649 LRP1BQ9NZR2 4599 aa4.61□□□□□ -1.67
VMA21-203ENST00000477649 DYNC1H1Q14204 4646 aaKnown RBP4.61□□□□□ -1.67
VMA21-203ENST00000477649 IGHV6-1A0A0B4J1U7 121 aa4.59□□□□□ -1.67
VMA21-203ENST00000477649 LINC00304Q8N9R0 145 aa4.59□□□□□ -1.67
VMA21-203ENST00000477649 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
VMA21-203ENST00000477649 SRRM2Q9UQ35 2752 aaKnown RBP4.59□□□□□ -1.67
VMA21-203ENST00000477649 H7BZZ5 65 aa4.58□□□□□ -1.68
VMA21-203ENST00000477649 KRTAP10-4P60372 401 aaPredicted RBP4.58□□□□□ -1.68
VMA21-203ENST00000477649 RPS28P62857 69 aaKnown RBP4.58□□□□□ -1.68
VMA21-203ENST00000477649 C1orf195Q5TG92 126 aa4.58□□□□□ -1.68
VMA21-203ENST00000477649 SMR3BP02814 79 aaPredicted RBP4.57□□□□□ -1.68
VMA21-203ENST00000477649 TRAV22A0A0B4J277 110 aa4.56□□□□□ -1.68
VMA21-203ENST00000477649 FAM236DA0A1B0GTK5 79 aa4.56□□□□□ -1.68
VMA21-203ENST00000477649 FAM236CP0DP71 79 aa4.56□□□□□ -1.68
VMA21-203ENST00000477649 LINC00313P59037 77 aa4.56□□□□□ -1.68
VMA21-203ENST00000477649 ZCCHC13Q8WW36 166 aaKnown RBP4.56□□□□□ -1.68
VMA21-203ENST00000477649 SNURFQ9Y675 71 aa4.56□□□□□ -1.68
VMA21-203ENST00000477649 H0Y9P7 68 aa4.55□□□□□ -1.68
VMA21-203ENST00000477649 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
VMA21-203ENST00000477649 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
VMA21-203ENST00000477649 PRR26Q8N8Z3 221 aa4.54□□□□□ -1.68
VMA21-203ENST00000477649 HSPG2P98160 4391 aa4.54□□□□□ -1.68
VMA21-203ENST00000477649 APOBP04114 4563 aaKnown RBP4.52□□□□□ -1.69
VMA21-203ENST00000477649 NDUFS5O43920 106 aa4.52□□□□□ -1.69
VMA21-203ENST00000477649 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
VMA21-203ENST00000477649 LINC00208Q96KT6 92 aa4.52□□□□□ -1.69
VMA21-203ENST00000477649 HERC1Q15751 4861 aa4.51□□□□□ -1.69
VMA21-203ENST00000477649 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
VMA21-203ENST00000477649 C1orf64Q8NEQ6 169 aa4.51□□□□□ -1.69
VMA21-203ENST00000477649 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
VMA21-203ENST00000477649 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
VMA21-203ENST00000477649 Q5VSD8 79 aa4.5□□□□□ -1.69
VMA21-203ENST00000477649 NOTCH2NLQ7Z3S9 236 aa4.49□□□□□ -1.69
VMA21-203ENST00000477649 CYP4F30PQ9H0H9 118 aa4.48□□□□□ -1.69
VMA21-203ENST00000477649 KRTAP16-1A8MUX0 517 aa4.47□□□□□ -1.69
VMA21-203ENST00000477649 KRTAP10-8P60410 259 aa4.46□□□□□ -1.7
VMA21-203ENST00000477649 Q8N1X5 172 aa4.46□□□□□ -1.7
VMA21-203ENST00000477649 FP248Q71RG6 208 aaPredicted RBP4.45□□□□□ -1.7
VMA21-203ENST00000477649 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
VMA21-203ENST00000477649 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
VMA21-203ENST00000477649 FAT1Q14517 4588 aa4.42□□□□□ -1.7
VMA21-203ENST00000477649 SMIM26A0A096LP01 95 aa4.42□□□□□ -1.7
VMA21-203ENST00000477649 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
VMA21-203ENST00000477649 OXTP01178 125 aa4.41□□□□□ -1.7
VMA21-203ENST00000477649 Q5W150 140 aa4.4□□□□□ -1.71
VMA21-203ENST00000477649 C20orf166-AS1Q96NR2 134 aa4.4□□□□□ -1.71
VMA21-203ENST00000477649 A8MUU9 505 aa4.39□□□□□ -1.71
VMA21-203ENST00000477649 IGKV2-30P06310 120 aa4.39□□□□□ -1.71
VMA21-203ENST00000477649 PCOTHQ58A44 107 aa4.37□□□□□ -1.71
VMA21-203ENST00000477649 Q75L30 129 aa4.36□□□□□ -1.71
VMA21-203ENST00000477649 V9GYY9 64 aa4.36□□□□□ -1.71
VMA21-203ENST00000477649 C7orf65Q6ZTY9 151 aa4.35□□□□□ -1.71
VMA21-203ENST00000477649 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
VMA21-203ENST00000477649 ACYP2P14621 99 aa4.34□□□□□ -1.71
VMA21-203ENST00000477649 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
VMA21-203ENST00000477649 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms