RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
TOP3A-205ENST00000477508 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
TOP3A-205ENST00000477508 F8W1H4 67 aa7.12□□□□□ -1.27
TOP3A-205ENST00000477508 KRTAP19-4Q3LI73 84 aa7.12□□□□□ -1.27
TOP3A-205ENST00000477508 DEFB116Q30KQ4 102 aa7.1□□□□□ -1.27
TOP3A-205ENST00000477508 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.27
TOP3A-205ENST00000477508 NREPQ16612 68 aa7.09□□□□□ -1.27
TOP3A-205ENST00000477508 LINC00313P59037 77 aa7.08□□□□□ -1.28
TOP3A-205ENST00000477508 NDUFB1O75438 58 aa7.07□□□□□ -1.28
TOP3A-205ENST00000477508 Q75L30 129 aa7.07□□□□□ -1.28
TOP3A-205ENST00000477508 A0A0U1RQV1 116 aa7.06□□□□□ -1.28
TOP3A-205ENST00000477508 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
TOP3A-205ENST00000477508 C8orf87E5RJ46 101 aa7.05□□□□□ -1.28
TOP3A-205ENST00000477508 PCOTHQ58A44 107 aa7.05□□□□□ -1.28
TOP3A-205ENST00000477508 MUC2Q02817 5179 aa7.05□□□□□ -1.28
TOP3A-205ENST00000477508 IGHV6-1A0A0B4J1U7 121 aa7.04□□□□□ -1.28
TOP3A-205ENST00000477508 LOC100996750A0A140TA64 210 aa7.04□□□□□ -1.28
TOP3A-205ENST00000477508 DSCR10P59022 87 aa7.04□□□□□ -1.28
TOP3A-205ENST00000477508 C20orf166-AS1Q96NR2 134 aa7.04□□□□□ -1.28
TOP3A-205ENST00000477508 KRTAP4-6Q9BYQ5 205 aa7.04□□□□□ -1.28
TOP3A-205ENST00000477508 A8MWP4 228 aa7.03□□□□□ -1.28
TOP3A-205ENST00000477508 A8MUU9 505 aa7.02□□□□□ -1.29
TOP3A-205ENST00000477508 ATP11AUNQ6ZP68 121 aa7.02□□□□□ -1.29
TOP3A-205ENST00000477508 ETDBQ3ZM63 59 aa7.01□□□□□ -1.29
TOP3A-205ENST00000477508 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
TOP3A-205ENST00000477508 Q6ZVQ6 151 aa6.98□□□□□ -1.29
TOP3A-205ENST00000477508 NOTCH2NLQ7Z3S9 236 aa6.98□□□□□ -1.29
TOP3A-205ENST00000477508 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
TOP3A-205ENST00000477508 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
TOP3A-205ENST00000477508 BPY2O14599 106 aa6.97□□□□□ -1.29
TOP3A-205ENST00000477508 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
TOP3A-205ENST00000477508 KRTAP4-1Q9BYQ7 146 aa6.96□□□□□ -1.3
TOP3A-205ENST00000477508 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
TOP3A-205ENST00000477508 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
TOP3A-205ENST00000477508 KRTAP23-1A1A580 65 aa6.94□□□□□ -1.3
TOP3A-205ENST00000477508 A0A1B0GV90 55 aa6.92□□□□□ -1.3
TOP3A-205ENST00000477508 K7EQZ3 153 aa6.9□□□□□ -1.3
TOP3A-205ENST00000477508 ACYP1P07311 99 aa6.9□□□□□ -1.3
TOP3A-205ENST00000477508 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
TOP3A-205ENST00000477508 KRTAP9-2Q9BYQ4 174 aa6.89□□□□□ -1.31
TOP3A-205ENST00000477508 TMEM254Q8TBM7 123 aa6.88□□□□□ -1.31
TOP3A-205ENST00000477508 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
TOP3A-205ENST00000477508 FAM240AA0A1B0GVK7 77 aa6.87□□□□□ -1.31
TOP3A-205ENST00000477508 hDV103S1A0JD37 113 aa6.86□□□□□ -1.31
TOP3A-205ENST00000477508 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
TOP3A-205ENST00000477508 CXCL6P80162 114 aa6.85□□□□□ -1.31
TOP3A-205ENST00000477508 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.31
TOP3A-205ENST00000477508 ZCCHC13Q8WW36 166 aaKnown RBP6.84□□□□□ -1.31
TOP3A-205ENST00000477508 Q8N9L7 120 aa6.83□□□□□ -1.32
TOP3A-205ENST00000477508 CASC2Q6XLA1 102 aa6.81□□□□□ -1.32
TOP3A-205ENST00000477508 NDUFS5O43920 106 aa6.79□□□□□ -1.32
TOP3A-205ENST00000477508 HCG22E2RYF7 251 aa6.78□□□□□ -1.32
TOP3A-205ENST00000477508 ATP5EP2Q5VTU8 51 aa6.78□□□□□ -1.32
TOP3A-205ENST00000477508 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
TOP3A-205ENST00000477508 J3QR89 54 aa6.77□□□□□ -1.33
TOP3A-205ENST00000477508 KRTAP19-2Q3LHN2 52 aa6.77□□□□□ -1.33
TOP3A-205ENST00000477508 COX6B2Q6YFQ2 88 aa6.77□□□□□ -1.33
TOP3A-205ENST00000477508 KRTAP9-6A0A140TA67 174 aa6.76□□□□□ -1.33
TOP3A-205ENST00000477508 SPINK7P58062 85 aa6.73□□□□□ -1.33
TOP3A-205ENST00000477508 LINC00643Q86TS7 51 aa6.73□□□□□ -1.33
TOP3A-205ENST00000477508 KRTAP3-1Q9BYR8 98 aa6.73□□□□□ -1.33
TOP3A-205ENST00000477508 RBM12B-AS1Q9P1G2 102 aa6.71□□□□□ -1.34
TOP3A-205ENST00000477508 HRES1P13985 223 aa6.69□□□□□ -1.34
TOP3A-205ENST00000477508 KRTAP19-1Q8IUB9 90 aa6.69□□□□□ -1.34
TOP3A-205ENST00000477508 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
TOP3A-205ENST00000477508 TP53AIP1Q9HCN2 124 aa6.69□□□□□ -1.34
TOP3A-205ENST00000477508 HIST1H4AP62805 103 aaKnown RBP6.67□□□□□ -1.34
TOP3A-205ENST00000477508 MT1HP80294 61 aa6.67□□□□□ -1.34
TOP3A-205ENST00000477508 MPLKIPQ8TAP9 179 aa6.67□□□□□ -1.34
TOP3A-205ENST00000477508 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
TOP3A-205ENST00000477508 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
TOP3A-205ENST00000477508 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
TOP3A-205ENST00000477508 Q5W150 140 aa6.65□□□□□ -1.34
TOP3A-205ENST00000477508 KRTAP4-12Q9BQ66 201 aa6.64□□□□□ -1.35
TOP3A-205ENST00000477508 C7orf65Q6ZTY9 151 aa6.63□□□□□ -1.35
TOP3A-205ENST00000477508 M0R2T5 61 aa6.62□□□□□ -1.35
TOP3A-205ENST00000477508 IGKV2D-30A0A075B6S6 120 aa6.61□□□□□ -1.35
TOP3A-205ENST00000477508 K7ERU9 68 aa6.61□□□□□ -1.35
TOP3A-205ENST00000477508 IGKV2-30P06310 120 aa6.61□□□□□ -1.35
TOP3A-205ENST00000477508 A0A087WVE0 104 aa6.55□□□□□ -1.36
TOP3A-205ENST00000477508 UQCRQO14949 82 aa6.54□□□□□ -1.36
TOP3A-205ENST00000477508 TRAV22A0A0B4J277 110 aa6.53□□□□□ -1.36
TOP3A-205ENST00000477508 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
TOP3A-205ENST00000477508 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
TOP3A-205ENST00000477508 ATOX1O00244 68 aa6.5□□□□□ -1.37
TOP3A-205ENST00000477508 LOC101927531A0A1B0GV80 90 aa6.49□□□□□ -1.37
TOP3A-205ENST00000477508 PCP4P48539 62 aa6.49□□□□□ -1.37
TOP3A-205ENST00000477508 H1FX-AS1Q4G0G2 97 aa6.48□□□□□ -1.37
TOP3A-205ENST00000477508 H0Y9P7 68 aa6.46□□□□□ -1.38
TOP3A-205ENST00000477508 C4orf26Q17RF5 130 aa6.46□□□□□ -1.38
TOP3A-205ENST00000477508 CYP4F30PQ9H0H9 118 aa6.46□□□□□ -1.38
TOP3A-205ENST00000477508 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.38
TOP3A-205ENST00000477508 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
TOP3A-205ENST00000477508 SCGB1A1P11684 91 aa6.45□□□□□ -1.38
TOP3A-205ENST00000477508 LCE3BQ5TA77 95 aa6.45□□□□□ -1.38
TOP3A-205ENST00000477508 OCR1Q9BZK8 76 aa6.45□□□□□ -1.38
TOP3A-205ENST00000477508 FSIP2Q5CZC0 6907 aa6.44□□□□□ -1.38
TOP3A-205ENST00000477508 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
TOP3A-205ENST00000477508 MP68P56378 58 aa6.42□□□□□ -1.38
TOP3A-205ENST00000477508 C5orf47Q569G3 176 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms