RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 J3KT08 172 aa5.74□□□□□ -1.49
HDLBP-236ENST00000477477 SCGB1C2P0DMR2 95 aa5.74□□□□□ -1.49
HDLBP-236ENST00000477477 RPS28P62857 69 aaKnown RBP5.74□□□□□ -1.49
HDLBP-236ENST00000477477 PRO0461Q9UI25 63 aa5.74□□□□□ -1.49
HDLBP-236ENST00000477477 A0A1W2PNM2 257 aa5.73□□□□□ -1.49
HDLBP-236ENST00000477477 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.73□□□□□ -1.49
HDLBP-236ENST00000477477 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
HDLBP-236ENST00000477477 ACYP1P07311 99 aa5.71□□□□□ -1.5
HDLBP-236ENST00000477477 LINC00313P59037 77 aa5.71□□□□□ -1.5
HDLBP-236ENST00000477477 FAM236DA0A1B0GTK5 79 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 MT2AP02795 61 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 MT-ATP8P03928 68 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 IGKV4-1P06312 121 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 FAM236CP0DP71 79 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 FXYD2P54710 66 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 PRO1854Q9UHT4 67 aa5.7□□□□□ -1.5
HDLBP-236ENST00000477477 TRBV7-4A0A0J9YYF1 115 aa5.69□□□□□ -1.5
HDLBP-236ENST00000477477 TRIAP1O43715 76 aa5.69□□□□□ -1.5
HDLBP-236ENST00000477477 MPLKIPQ8TAP9 179 aa5.69□□□□□ -1.5
HDLBP-236ENST00000477477 HRES1P13985 223 aa5.68□□□□□ -1.5
HDLBP-236ENST00000477477 ANKRD29Q8N6D5 301 aa5.68□□□□□ -1.5
HDLBP-236ENST00000477477 H3BQ85 93 aa5.67□□□□□ -1.5
HDLBP-236ENST00000477477 UQCRQO14949 82 aa5.67□□□□□ -1.5
HDLBP-236ENST00000477477 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
HDLBP-236ENST00000477477 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
HDLBP-236ENST00000477477 DNAL4O96015 105 aa5.66□□□□□ -1.5
HDLBP-236ENST00000477477 MT1FP04733 61 aa5.66□□□□□ -1.5
HDLBP-236ENST00000477477 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
HDLBP-236ENST00000477477 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
HDLBP-236ENST00000477477 DEFB116Q30KQ4 102 aa5.65□□□□□ -1.5
HDLBP-236ENST00000477477 LINC00472Q9H8W2 130 aa5.65□□□□□ -1.5
HDLBP-236ENST00000477477 FCGBPQ9Y6R7 5405 aaPredicted RBP5.64□□□□□ -1.51
HDLBP-236ENST00000477477 H3BT86 120 aa5.64□□□□□ -1.51
HDLBP-236ENST00000477477 IGHV6-1A0A0B4J1U7 121 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 TMEM256-PLSCR3K7ERE1 68 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 LCE2BO14633 110 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 TRACP01848 142 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 CCKP06307 115 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 TMEM258P61165 79 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
HDLBP-236ENST00000477477 PSMB2P49721 201 aa5.62□□□□□ -1.51
HDLBP-236ENST00000477477 KRTAP9-3Q9BYQ3 159 aa5.62□□□□□ -1.51
HDLBP-236ENST00000477477 C9JAW5 83 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 CCDC179H3BU77 68 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 K7ERJ3 54 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 COX6CP09669 75 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
HDLBP-236ENST00000477477 C8orf87E5RJ46 101 aa5.6□□□□□ -1.51
HDLBP-236ENST00000477477 ATOX1O00244 68 aa5.6□□□□□ -1.51
HDLBP-236ENST00000477477 A0A1B0GVX0 72 aa5.58□□□□□ -1.52
HDLBP-236ENST00000477477 SMCPP49901 116 aaPredicted RBP5.58□□□□□ -1.52
HDLBP-236ENST00000477477 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
HDLBP-236ENST00000477477 COX7CP15954 63 aa5.56□□□□□ -1.52
HDLBP-236ENST00000477477 ZCCHC13Q8WW36 166 aaKnown RBP5.56□□□□□ -1.52
HDLBP-236ENST00000477477 SPINK7P58062 85 aa5.54□□□□□ -1.52
HDLBP-236ENST00000477477 RBM3P98179 157 aaKnown RBP5.54□□□□□ -1.52
HDLBP-236ENST00000477477 DSCR8Q96T75 97 aa5.53□□□□□ -1.52
HDLBP-236ENST00000477477 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
HDLBP-236ENST00000477477 FAM236AA0A1B0GUQ0 79 aa5.52□□□□□ -1.53
HDLBP-236ENST00000477477 FAM236BA0A1B0GV22 79 aa5.52□□□□□ -1.53
HDLBP-236ENST00000477477 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
HDLBP-236ENST00000477477 MACF1Q9UPN3 7388 aaKnown RBP5.51□□□□□ -1.53
HDLBP-236ENST00000477477 SYNE2Q8WXH0 6885 aaKnown RBP5.49□□□□□ -1.53
HDLBP-236ENST00000477477 Q6ZQT0 140 aa5.49□□□□□ -1.53
HDLBP-236ENST00000477477 NDUFB1O75438 58 aa5.48□□□□□ -1.53
HDLBP-236ENST00000477477 BAALC-AS2P0C853 105 aa5.48□□□□□ -1.53
HDLBP-236ENST00000477477 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
HDLBP-236ENST00000477477 A8MWP4 228 aa5.47□□□□□ -1.53
HDLBP-236ENST00000477477 ATP5EP2Q5VTU8 51 aa5.47□□□□□ -1.53
HDLBP-236ENST00000477477 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
HDLBP-236ENST00000477477 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
HDLBP-236ENST00000477477 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
HDLBP-236ENST00000477477 KRTAP19-6Q3LI70 58 aa5.46□□□□□ -1.54
HDLBP-236ENST00000477477 SERP2Q8N6R1 65 aa5.46□□□□□ -1.54
HDLBP-236ENST00000477477 C8orf17Q9NRJ1 99 aa5.46□□□□□ -1.54
HDLBP-236ENST00000477477 IGKV3D-7A0A0C4DH55 119 aa5.44□□□□□ -1.54
HDLBP-236ENST00000477477 A0A1B0GW54 56 aa5.44□□□□□ -1.54
HDLBP-236ENST00000477477 V9GYY9 64 aa5.44□□□□□ -1.54
HDLBP-236ENST00000477477 JMJD7-PLA2G4BH0Y9G9 81 aa5.42□□□□□ -1.54
HDLBP-236ENST00000477477 Q6ZVQ6 151 aa5.42□□□□□ -1.54
HDLBP-236ENST00000477477 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
HDLBP-236ENST00000477477 LOC110117498A0A087WWA1 95 aa5.41□□□□□ -1.54
HDLBP-236ENST00000477477 NDUFC1O43677 76 aa5.41□□□□□ -1.54
HDLBP-236ENST00000477477 PDE6GP18545 87 aa5.4□□□□□ -1.54
HDLBP-236ENST00000477477 SMIM26A0A096LP01 95 aa5.39□□□□□ -1.55
HDLBP-236ENST00000477477 SEC61GP60059 68 aa5.39□□□□□ -1.55
HDLBP-236ENST00000477477 PRR15Q8IV56 129 aa5.38□□□□□ -1.55
HDLBP-236ENST00000477477 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
HDLBP-236ENST00000477477 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
HDLBP-236ENST00000477477 H1FX-AS1Q4G0G2 97 aa5.36□□□□□ -1.55
HDLBP-236ENST00000477477 TMEM254Q8TBM7 123 aa5.36□□□□□ -1.55
HDLBP-236ENST00000477477 MRPL34Q9BQ48 92 aaKnown RBP5.36□□□□□ -1.55
HDLBP-236ENST00000477477 NREPQ16612 68 aa5.35□□□□□ -1.55
HDLBP-236ENST00000477477 hDV103S1A0JD37 113 aa5.32□□□□□ -1.56
HDLBP-236ENST00000477477 K7EQZ3 153 aa5.31□□□□□ -1.56
HDLBP-236ENST00000477477 NDUFS5O43920 106 aa5.31□□□□□ -1.56
HDLBP-236ENST00000477477 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
HDLBP-236ENST00000477477 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms