RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 BOD1L1Q8NFC6 3051 aa3.86□□□□□ -1.79
SPATA9-204ENST00000477047 FBN1P35555 2871 aaKnown RBP3.86□□□□□ -1.79
SPATA9-204ENST00000477047 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
SPATA9-204ENST00000477047 LRRK2Q5S007 2527 aa3.85□□□□□ -1.79
SPATA9-204ENST00000477047 PDZD2O15018 2839 aa3.85□□□□□ -1.79
SPATA9-204ENST00000477047 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
SPATA9-204ENST00000477047 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
SPATA9-204ENST00000477047 F8P00451 2351 aa3.84□□□□□ -1.79
SPATA9-204ENST00000477047 LY6EQ16553 131 aa3.84□□□□□ -1.8
SPATA9-204ENST00000477047 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.8
SPATA9-204ENST00000477047 AKAP6Q13023 2319 aa3.84□□□□□ -1.8
SPATA9-204ENST00000477047 NBEAL1Q6ZS30 2694 aa3.83□□□□□ -1.8
SPATA9-204ENST00000477047 H1FX-AS1Q4G0G2 97 aa3.83□□□□□ -1.8
SPATA9-204ENST00000477047 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
SPATA9-204ENST00000477047 CELSR2Q9HCU4 2923 aa3.83□□□□□ -1.8
SPATA9-204ENST00000477047 HIVEP1P15822 2718 aa3.82□□□□□ -1.8
SPATA9-204ENST00000477047 IGKV2-30P06310 120 aa3.82□□□□□ -1.8
SPATA9-204ENST00000477047 DEFB124Q8NES8 71 aa3.82□□□□□ -1.8
SPATA9-204ENST00000477047 MTORP42345 2549 aa3.82□□□□□ -1.8
SPATA9-204ENST00000477047 RP1L1Q8IWN7 2480 aaPredicted RBP3.82□□□□□ -1.8
SPATA9-204ENST00000477047 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
SPATA9-204ENST00000477047 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
SPATA9-204ENST00000477047 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
SPATA9-204ENST00000477047 CENPEQ02224 2701 aa3.8□□□□□ -1.8
SPATA9-204ENST00000477047 LELP1Q5T871 98 aa3.8□□□□□ -1.8
SPATA9-204ENST00000477047 NIPBLQ6KC79 2804 aaeCLIP3.79□□□□□ -1.8
SPATA9-204ENST00000477047 CRYBG3Q68DQ2 2970 aa3.79□□□□□ -1.8
SPATA9-204ENST00000477047 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.8
SPATA9-204ENST00000477047 BRD3OSQ6XYD6 125 aa3.78□□□□□ -1.8
SPATA9-204ENST00000477047 LYNX1P0DP58 116 aa3.77□□□□□ -1.81
SPATA9-204ENST00000477047 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
SPATA9-204ENST00000477047 FN1P02751 2386 aaKnown RBP3.77□□□□□ -1.81
SPATA9-204ENST00000477047 HIVEP3Q5T1R4 2406 aa3.77□□□□□ -1.81
SPATA9-204ENST00000477047 KRTAP4-4Q9BYR3 166 aa3.76□□□□□ -1.81
SPATA9-204ENST00000477047 ATRQ13535 2644 aa3.76□□□□□ -1.81
SPATA9-204ENST00000477047 ANKHD1Q8IWZ3 2542 aaKnown RBP3.76□□□□□ -1.81
SPATA9-204ENST00000477047 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
SPATA9-204ENST00000477047 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
SPATA9-204ENST00000477047 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
SPATA9-204ENST00000477047 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
SPATA9-204ENST00000477047 ROS1P08922 2347 aa3.74□□□□□ -1.81
SPATA9-204ENST00000477047 FLG2Q5D862 2391 aaPredicted RBP3.72□□□□□ -1.81
SPATA9-204ENST00000477047 DEFB136Q30KP8 78 aa3.72□□□□□ -1.81
SPATA9-204ENST00000477047 APCP25054 2843 aa3.72□□□□□ -1.81
SPATA9-204ENST00000477047 TENM2Q9NT68 2774 aa3.71□□□□□ -1.82
SPATA9-204ENST00000477047 K7EIL1 84 aa3.71□□□□□ -1.82
SPATA9-204ENST00000477047 INE1O15225 51 aa3.69□□□□□ -1.82
SPATA9-204ENST00000477047 STAB1Q9NY15 2570 aa3.69□□□□□ -1.82
SPATA9-204ENST00000477047 NOTCH3Q9UM47 2321 aa3.68□□□□□ -1.82
SPATA9-204ENST00000477047 C14orf177Q52M58 125 aa3.68□□□□□ -1.82
SPATA9-204ENST00000477047 PKD1L1Q8TDX9 2849 aa3.68□□□□□ -1.82
SPATA9-204ENST00000477047 Q6ZRN7 208 aaPredicted RBP3.68□□□□□ -1.82
SPATA9-204ENST00000477047 CUBNO60494 3623 aa3.67□□□□□ -1.82
SPATA9-204ENST00000477047 MAP1AP78559 2803 aaPredicted RBP3.67□□□□□ -1.82
SPATA9-204ENST00000477047 A0A1W2PPR1 153 aa3.67□□□□□ -1.82
SPATA9-204ENST00000477047 SPACA4Q8TDM5 124 aa3.67□□□□□ -1.82
SPATA9-204ENST00000477047 R4GN34 69 aa3.67□□□□□ -1.82
SPATA9-204ENST00000477047 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
SPATA9-204ENST00000477047 NBASA2RRP1 2371 aa3.65□□□□□ -1.82
SPATA9-204ENST00000477047 ZNF469Q96JG9 3925 aaPredicted RBP3.65□□□□□ -1.82
SPATA9-204ENST00000477047 C10orf99Q6UWK7 81 aa3.65□□□□□ -1.82
SPATA9-204ENST00000477047 KRTAP7-1Q8IUC3 87 aa3.64□□□□□ -1.83
SPATA9-204ENST00000477047 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
SPATA9-204ENST00000477047 NOTCH1P46531 2555 aa3.64□□□□□ -1.83
SPATA9-204ENST00000477047 JMJD1CQ15652 2540 aa3.64□□□□□ -1.83
SPATA9-204ENST00000477047 H3BNG1 76 aa3.63□□□□□ -1.83
SPATA9-204ENST00000477047 C10orf95Q9H7T3 257 aa3.63□□□□□ -1.83
SPATA9-204ENST00000477047 RYR3Q15413 4870 aa3.63□□□□□ -1.83
SPATA9-204ENST00000477047 COL6A5A8TX70 2615 aa3.63□□□□□ -1.83
SPATA9-204ENST00000477047 PRLHP81277 87 aa3.62□□□□□ -1.83
SPATA9-204ENST00000477047 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
SPATA9-204ENST00000477047 CSPG4Q6UVK1 2322 aa3.61□□□□□ -1.83
SPATA9-204ENST00000477047 CCDC168Q8NDH2 2452 aa3.61□□□□□ -1.83
SPATA9-204ENST00000477047 A0A096LPF7 62 aa3.61□□□□□ -1.83
SPATA9-204ENST00000477047 KMT2CQ8NEZ4 4911 aaKnown RBP3.6□□□□□ -1.83
SPATA9-204ENST00000477047 KRTAP10-6P60371 365 aaPredicted RBP3.6□□□□□ -1.83
SPATA9-204ENST00000477047 TACC2O95359 2948 aa3.6□□□□□ -1.83
SPATA9-204ENST00000477047 VPS13CQ709C8 3753 aa3.59□□□□□ -1.83
SPATA9-204ENST00000477047 TGP01266 2768 aa3.59□□□□□ -1.83
SPATA9-204ENST00000477047 MEGF8Q7Z7M0 2845 aa3.58□□□□□ -1.84
SPATA9-204ENST00000477047 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
SPATA9-204ENST00000477047 ACANP16112 2415 aa3.58□□□□□ -1.84
SPATA9-204ENST00000477047 PRRC2CQ9Y520 2896 aaKnown RBP3.57□□□□□ -1.84
SPATA9-204ENST00000477047 SPINK1P00995 79 aa3.57□□□□□ -1.84
SPATA9-204ENST00000477047 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
SPATA9-204ENST00000477047 UBE2DNLQ8IWF7 75 aa3.57□□□□□ -1.84
SPATA9-204ENST00000477047 DCHS2Q6V1P9 2916 aa3.56□□□□□ -1.84
SPATA9-204ENST00000477047 KRTAP12-2P59991 146 aa3.55□□□□□ -1.84
SPATA9-204ENST00000477047 HIVEP2P31629 2446 aa3.55□□□□□ -1.84
SPATA9-204ENST00000477047 KRTAP13-1Q8IUC0 172 aa3.55□□□□□ -1.84
SPATA9-204ENST00000477047 ANK2Q01484 3957 aa3.54□□□□□ -1.84
SPATA9-204ENST00000477047 TLN2Q9Y4G6 2542 aa3.52□□□□□ -1.85
SPATA9-204ENST00000477047 MXRA5Q9NR99 2828 aa3.51□□□□□ -1.85
SPATA9-204ENST00000477047 S4R3F8 94 aa3.51□□□□□ -1.85
SPATA9-204ENST00000477047 NSD1Q96L73 2696 aaPredicted RBP3.51□□□□□ -1.85
SPATA9-204ENST00000477047 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
SPATA9-204ENST00000477047 EPPK1P58107 5090 aaKnown RBP3.49□□□□□ -1.85
SPATA9-204ENST00000477047 LCE1EQ5T753 118 aa3.49□□□□□ -1.85
SPATA9-204ENST00000477047 SVEP1Q4LDE5 3571 aa3.48□□□□□ -1.85
SPATA9-204ENST00000477047 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms