RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PDE6GP18545 87 aa2.6□□□□□ -1.99
VPS13D-206ENST00000476045 TRAV7A0A075B6U4 112 aa2.59□□□□□ -1.99
VPS13D-206ENST00000476045 FAM168BA1KXE4 195 aa2.59□□□□□ -1.99
VPS13D-206ENST00000476045 RPL37AP8A6NKH3 93 aa2.59□□□□□ -1.99
VPS13D-206ENST00000476045 TMEM258P61165 79 aa2.59□□□□□ -1.99
VPS13D-206ENST00000476045 Q8N9L7 120 aa2.59□□□□□ -1.99
VPS13D-206ENST00000476045 ETDCA0A1B0GVM5 59 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 BPY2O14599 106 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 BCE1O60756 84 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 TLX1NBP0CAT3 122 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 CXCL6P80162 114 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 NREPQ16612 68 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 FAM19A5Q7Z5A7 132 aaPredicted RBP2.58□□□□□ -2
VPS13D-206ENST00000476045 Q8N377 158 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 SNURFQ9Y675 71 aa2.58□□□□□ -2
VPS13D-206ENST00000476045 FAM236DA0A1B0GTK5 79 aa2.57□□□□□ -2
VPS13D-206ENST00000476045 FAM236CP0DP71 79 aa2.57□□□□□ -2
VPS13D-206ENST00000476045 RPS28P62857 69 aaKnown RBP2.57□□□□□ -2
VPS13D-206ENST00000476045 KCNQ1DNQ9H478 68 aa2.57□□□□□ -2
VPS13D-206ENST00000476045 PSORS1C2Q9UIG4 136 aa2.57□□□□□ -2
VPS13D-206ENST00000476045 IGLV1-50A0A075B6I6 118 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 ERC2-IT1O76042 136 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 IGKV4-1P06312 121 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 UBE2BP63146 152 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 KRTAP7-1Q8IUC3 87 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 Q9BRP9 147 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
VPS13D-206ENST00000476045 A0A0G2JQZ4 141 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 A0A1W2PNM2 257 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 A0A1W2PNN7 141 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 F8WEM9 126 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 C1orf137Q5JT78 98 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 Q6ZRX8 168 aa2.55□□□□□ -2
VPS13D-206ENST00000476045 RNF213Q63HN8 5207 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 KRTAP4-16G5E9R7 235 aaPredicted RBP2.54□□□□□ -2
VPS13D-206ENST00000476045 H0Y9J4 135 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 H7BZZ5 65 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 IGLV7-43P04211 117 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 SPRR1AP35321 89 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 SEC61GP60059 68 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 KRTAP10-8P60410 259 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 MRPL55Q7Z7F7 128 aaKnown RBP2.54□□□□□ -2
VPS13D-206ENST00000476045 SERP1Q9Y6X1 66 aa2.54□□□□□ -2
VPS13D-206ENST00000476045 IGLV5-48A0A075B6I7 105 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 PRLHP81277 87 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 C4orf26Q17RF5 130 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 HRCT1Q6UXD1 115 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 Q8NBF4 154 aa2.53□□□□□ -2
VPS13D-206ENST00000476045 A0A087X002 238 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 A0A0U1RQV1 116 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 KLKP1Q107X0 134 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 C5orf47Q569G3 176 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 Q5XG85 94 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 PHF5AQ7RTV0 110 aaKnown RBP2.52□□□□□ -2.01
VPS13D-206ENST00000476045 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 HIGD2AQ9BW72 106 aa2.52□□□□□ -2.01
VPS13D-206ENST00000476045 UBE2AP49459 152 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 DSCR10P59022 87 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 DEFB116Q30KQ4 102 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 NOTCH2NLQ7Z3S9 236 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 KRTAP11-1Q8IUC1 163 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 OCR1Q9BZK8 76 aa2.51□□□□□ -2.01
VPS13D-206ENST00000476045 K7EQZ3 153 aa2.5□□□□□ -2.01
VPS13D-206ENST00000476045 NDUFC1O43677 76 aa2.5□□□□□ -2.01
VPS13D-206ENST00000476045 ZNF861PO60384 105 aa2.5□□□□□ -2.01
VPS13D-206ENST00000476045 KRTAP1-4P0C5Y4 121 aa2.5□□□□□ -2.01
VPS13D-206ENST00000476045 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
VPS13D-206ENST00000476045 SMIM26A0A096LP01 95 aa2.49□□□□□ -2.01
VPS13D-206ENST00000476045 ATP5EP56381 51 aaPredicted RBP2.49□□□□□ -2.01
VPS13D-206ENST00000476045 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
VPS13D-206ENST00000476045 WFDC13Q8IUB5 93 aa2.49□□□□□ -2.01
VPS13D-206ENST00000476045 SPRR4Q96PI1 79 aa2.49□□□□□ -2.01
VPS13D-206ENST00000476045 A0A087WSZ3 146 aa2.48□□□□□ -2.01
VPS13D-206ENST00000476045 A0A1B0GW54 56 aa2.48□□□□□ -2.01
VPS13D-206ENST00000476045 HCG22E2RYF7 251 aa2.48□□□□□ -2.01
VPS13D-206ENST00000476045 FP248Q71RG6 208 aaPredicted RBP2.48□□□□□ -2.01
VPS13D-206ENST00000476045 PRR4Q16378 134 aa2.47□□□□□ -2.01
VPS13D-206ENST00000476045 LPAP08519 4548 aa2.47□□□□□ -2.01
VPS13D-206ENST00000476045 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.02
VPS13D-206ENST00000476045 LCE3CQ5T5A8 94 aa2.46□□□□□ -2.02
VPS13D-206ENST00000476045 KRTAP13-1Q8IUC0 172 aa2.46□□□□□ -2.02
VPS13D-206ENST00000476045 TYMSOSQ8TAI1 123 aa2.46□□□□□ -2.02
VPS13D-206ENST00000476045 ZNF706Q9Y5V0 76 aaPredicted RBP2.46□□□□□ -2.02
VPS13D-206ENST00000476045 SPRR1BP22528 89 aa2.45□□□□□ -2.02
VPS13D-206ENST00000476045 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
VPS13D-206ENST00000476045 CASC2Q6XLA1 102 aa2.45□□□□□ -2.02
VPS13D-206ENST00000476045 LINC00304Q8N9R0 145 aa2.45□□□□□ -2.02
VPS13D-206ENST00000476045 ZCCHC13Q8WW36 166 aaKnown RBP2.45□□□□□ -2.02
VPS13D-206ENST00000476045 IGLV7-46A0A075B6I9 117 aa2.44□□□□□ -2.02
VPS13D-206ENST00000476045 H0Y9P7 68 aa2.44□□□□□ -2.02
VPS13D-206ENST00000476045 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
VPS13D-206ENST00000476045 SPAG11AQ6PDA7 123 aa2.44□□□□□ -2.02
VPS13D-206ENST00000476045 LINC00208Q96KT6 92 aa2.44□□□□□ -2.02
VPS13D-206ENST00000476045 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 MP68P56378 58 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 PRR15Q8IV56 129 aa2.43□□□□□ -2.02
VPS13D-206ENST00000476045 C1orf64Q8NEQ6 169 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms