RNA–Protein interactions for RNA: ENST00000475858.1

FAM107B-216, Transcript of family with sequence similarity 107 member B, humanhuman

TSL 2

Gene FAM107B, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM107B-216ENST00000475858 C4BP0C0L5 1744 aa0.7□□□□□ -2.3
FAM107B-216ENST00000475858 DNAH1Q9P2D7 4330 aa0.7□□□□□ -2.3
FAM107B-216ENST00000475858 PIGYQ3MUY2 71 aa0.7□□□□□ -2.3
FAM107B-216ENST00000475858 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
FAM107B-216ENST00000475858 CDC42BPAQ5VT25 1732 aa0.69□□□□□ -2.3
FAM107B-216ENST00000475858 UBR3Q6ZT12 1888 aa0.69□□□□□ -2.3
FAM107B-216ENST00000475858 TACC2O95359 2948 aa0.69□□□□□ -2.3
FAM107B-216ENST00000475858 SPTY2D1-AS1A0A0U1RR47 76 aa0.69□□□□□ -2.3
FAM107B-216ENST00000475858 LRRC37AA6NMS7 1700 aa0.69□□□□□ -2.3
FAM107B-216ENST00000475858 DYNC2H1Q8NCM8 4307 aaKnown RBP0.68□□□□□ -2.3
FAM107B-216ENST00000475858 MAP1AP78559 2803 aaPredicted RBP0.68□□□□□ -2.3
FAM107B-216ENST00000475858 FRAS1Q86XX4 4008 aa0.68□□□□□ -2.3
FAM107B-216ENST00000475858 CPSF4LA6NMK7 179 aaKnown RBP0.68□□□□□ -2.3
FAM107B-216ENST00000475858 HMGA1P17096 107 aaKnown RBP0.68□□□□□ -2.3
FAM107B-216ENST00000475858 GNG13Q9P2W3 67 aa0.68□□□□□ -2.3
FAM107B-216ENST00000475858 COL7A1Q02388 2944 aa0.68□□□□□ -2.3
FAM107B-216ENST00000475858 PTPRQQ9UMZ3 2332 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 CCDC141Q6ZP82 1450 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 NBASA2RRP1 2371 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 SMIM31A0A1B0GVY4 71 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 I3L3M4 83 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 SPRR1BP22528 89 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 GPR98Q8WXG9 6306 aa0.67□□□□□ -2.3
FAM107B-216ENST00000475858 DDX60Q8IY21 1712 aaKnown RBP0.67□□□□□ -2.3
FAM107B-216ENST00000475858 CSPG4Q6UVK1 2322 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 FAM208AQ9UK61 1670 aaKnown RBP0.66□□□□□ -2.3
FAM107B-216ENST00000475858 TRRAPQ9Y4A5 3859 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 WNK1Q9H4A3 2382 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 SPRR1AP35321 89 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 ATP5EP2Q5VTU8 51 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 KRTAP19-3Q7Z4W3 81 aa0.66□□□□□ -2.3
FAM107B-216ENST00000475858 DDX60LQ5H9U9 1706 aaKnown RBP0.66□□□□□ -2.3
FAM107B-216ENST00000475858 SSPOA2VEC9 5147 aa0.65□□□□□ -2.3
FAM107B-216ENST00000475858 NDUFA4O00483 81 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 MRPL34Q9BQ48 92 aaKnown RBP0.65□□□□□ -2.31
FAM107B-216ENST00000475858 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 PRXQ9BXM0 1461 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 CD163L1Q9NR16 1453 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 CMYA5Q8N3K9 4069 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 PLCE1Q9P212 2302 aa0.65□□□□□ -2.31
FAM107B-216ENST00000475858 RNF213Q63HN8 5207 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 FSIP2Q5CZC0 6907 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 USF3Q68DE3 2245 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 ACANP16112 2415 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 HMCN2Q8NDA2 5059 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 CSMD3Q7Z407 3707 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 NDUFA3O95167 84 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 COX8AP10176 69 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 COX6B1P14854 86 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 H1FX-AS1Q4G0G2 97 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 ENHOQ6UWT2 76 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 LYSTQ99698 3801 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 SPTBN1Q01082 2364 aaKnown RBP0.64□□□□□ -2.31
FAM107B-216ENST00000475858 HECTD4Q9Y4D8 3996 aa0.64□□□□□ -2.31
FAM107B-216ENST00000475858 GCC2Q8IWJ2 1684 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 CACNA1EQ15878 2313 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
FAM107B-216ENST00000475858 NDUFB1O75438 58 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 DEFB105AQ8NG35 78 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 S100ZQ8WXG8 99 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 USMG5Q96IX5 58 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 HUWE1Q7Z6Z7 4374 aaKnown RBP0.63□□□□□ -2.31
FAM107B-216ENST00000475858 KMT2AQ03164 3969 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 APC2O95996 2303 aa0.63□□□□□ -2.31
FAM107B-216ENST00000475858 GOLGA4Q13439 2230 aaKnown RBP0.62□□□□□ -2.31
FAM107B-216ENST00000475858 HSPG2P98160 4391 aa0.62□□□□□ -2.31
FAM107B-216ENST00000475858 C3orf79P0CE67 100 aa0.62□□□□□ -2.31
FAM107B-216ENST00000475858 AHCTF1Q8WYP5 2266 aa0.62□□□□□ -2.31
FAM107B-216ENST00000475858 DUOX1Q9NRD9 1551 aa0.62□□□□□ -2.31
FAM107B-216ENST00000475858 SONP18583 2426 aaKnown RBP0.62□□□□□ -2.31
FAM107B-216ENST00000475858 ANK3Q12955 4377 aaKnown RBP0.61□□□□□ -2.31
FAM107B-216ENST00000475858 STAB2Q8WWQ8 2551 aa0.61□□□□□ -2.31
FAM107B-216ENST00000475858 A0A1B0GUL6 1792 aa0.61□□□□□ -2.31
FAM107B-216ENST00000475858 FAT2Q9NYQ8 4349 aa0.61□□□□□ -2.31
FAM107B-216ENST00000475858 ATXN8Q156A1 80 aa0.61□□□□□ -2.31
FAM107B-216ENST00000475858 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
FAM107B-216ENST00000475858 NEBP20929 6669 aa0.6□□□□□ -2.31
FAM107B-216ENST00000475858 K7EMI3 77 aa0.6□□□□□ -2.31
FAM107B-216ENST00000475858 KRTAP20-1Q3LI63 56 aa0.6□□□□□ -2.31
FAM107B-216ENST00000475858 DNAH9Q9NYC9 4486 aa0.6□□□□□ -2.31
FAM107B-216ENST00000475858 DMBT1Q9UGM3 2413 aaPredicted RBP0.59□□□□□ -2.31
FAM107B-216ENST00000475858 NFAT5O94916 1531 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 ACACAQ13085 2346 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 SYNE1Q8NF91 8797 aaKnown RBP0.59□□□□□ -2.31
FAM107B-216ENST00000475858 LCE6AA0A183 80 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 LINC01549A6NIU2 74 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 PRH1P02810 166 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 SFTA3P0C7M3 94 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 DEFB109BQ30KR1 87 aa0.59□□□□□ -2.31
FAM107B-216ENST00000475858 DYNC1H1Q14204 4646 aaKnown RBP0.58□□□□□ -2.32
FAM107B-216ENST00000475858 MYCBP2O75592 4640 aa0.58□□□□□ -2.32
FAM107B-216ENST00000475858 RPL38P63173 70 aaKnown RBP0.58□□□□□ -2.32
FAM107B-216ENST00000475858 SPINK6Q6UWN8 80 aa0.58□□□□□ -2.32
FAM107B-216ENST00000475858 SMIM5Q71RC9 77 aa0.58□□□□□ -2.32
FAM107B-216ENST00000475858 WFDC13Q8IUB5 93 aa0.58□□□□□ -2.32
FAM107B-216ENST00000475858 SRRM2Q9UQ35 2752 aaKnown RBP0.58□□□□□ -2.32
FAM107B-216ENST00000475858 LOC730098B7Z3J9 87 aa0.57□□□□□ -2.32
FAM107B-216ENST00000475858 FAT3Q8TDW7 4589 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms