RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 MEGF8Q7Z7M0 2845 aa7.9□□□□□ -1.15
CCNL1-216ENST00000475298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.89□□□□□ -1.15
CCNL1-216ENST00000475298 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
CCNL1-216ENST00000475298 KMT2AQ03164 3969 aa7.87□□□□□ -1.15
CCNL1-216ENST00000475298 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
CCNL1-216ENST00000475298 H0Y9J4 135 aa7.86□□□□□ -1.15
CCNL1-216ENST00000475298 SPRR1BP22528 89 aa7.85□□□□□ -1.15
CCNL1-216ENST00000475298 ASB16-AS1Q495Z4 193 aa7.85□□□□□ -1.15
CCNL1-216ENST00000475298 Q6ZR54 194 aa7.85□□□□□ -1.15
CCNL1-216ENST00000475298 HECTD4Q9Y4D8 3996 aa7.85□□□□□ -1.15
CCNL1-216ENST00000475298 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
CCNL1-216ENST00000475298 KRTAP13-1Q8IUC0 172 aa7.84□□□□□ -1.15
CCNL1-216ENST00000475298 SPACA4Q8TDM5 124 aa7.84□□□□□ -1.15
CCNL1-216ENST00000475298 A0A087WTM6 91 aa7.83□□□□□ -1.16
CCNL1-216ENST00000475298 TGP01266 2768 aa7.83□□□□□ -1.16
CCNL1-216ENST00000475298 ALMS1Q8TCU4 4167 aa7.82□□□□□ -1.16
CCNL1-216ENST00000475298 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
CCNL1-216ENST00000475298 TP53AIP1Q9HCN2 124 aa7.81□□□□□ -1.16
CCNL1-216ENST00000475298 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
CCNL1-216ENST00000475298 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
CCNL1-216ENST00000475298 RTL8CO15255 209 aa7.79□□□□□ -1.16
CCNL1-216ENST00000475298 DNAH8Q96JB1 4490 aa7.76□□□□□ -1.17
CCNL1-216ENST00000475298 DNAH17Q9UFH2 4485 aa7.76□□□□□ -1.17
CCNL1-216ENST00000475298 Q96NJ1 140 aa7.76□□□□□ -1.17
CCNL1-216ENST00000475298 ANAPC11Q9NYG5 84 aa7.75□□□□□ -1.17
CCNL1-216ENST00000475298 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
CCNL1-216ENST00000475298 C8orf17Q9NRJ1 99 aa7.74□□□□□ -1.17
CCNL1-216ENST00000475298 A0A087X002 238 aa7.71□□□□□ -1.18
CCNL1-216ENST00000475298 IGLV5-52A0A0A0MRZ9 124 aa7.71□□□□□ -1.18
CCNL1-216ENST00000475298 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
CCNL1-216ENST00000475298 LINC00483Q53H64 154 aa7.69□□□□□ -1.18
CCNL1-216ENST00000475298 DNAH6Q9C0G6 4158 aa7.69□□□□□ -1.18
CCNL1-216ENST00000475298 WWC2-AS2Q96NR7 200 aa7.68□□□□□ -1.18
CCNL1-216ENST00000475298 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
CCNL1-216ENST00000475298 LY6G6CO95867 125 aa7.67□□□□□ -1.18
CCNL1-216ENST00000475298 ZNF861PO60384 105 aa7.66□□□□□ -1.18
CCNL1-216ENST00000475298 MRPL34Q9BQ48 92 aaKnown RBP7.66□□□□□ -1.18
CCNL1-216ENST00000475298 IGHV6-1A0A0B4J1U7 121 aa7.65□□□□□ -1.18
CCNL1-216ENST00000475298 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
CCNL1-216ENST00000475298 A0A1B0GVX0 72 aa7.64□□□□□ -1.19
CCNL1-216ENST00000475298 NOTCH2NLQ7Z3S9 236 aa7.64□□□□□ -1.19
CCNL1-216ENST00000475298 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
CCNL1-216ENST00000475298 ACYP2P14621 99 aa7.63□□□□□ -1.19
CCNL1-216ENST00000475298 Q5W150 140 aa7.63□□□□□ -1.19
CCNL1-216ENST00000475298 KRTAP13-3Q3SY46 172 aa7.62□□□□□ -1.19
CCNL1-216ENST00000475298 A0A1B0GU69 56 aa7.62□□□□□ -1.19
CCNL1-216ENST00000475298 RETNLBQ9BQ08 111 aa7.61□□□□□ -1.19
CCNL1-216ENST00000475298 DNAH5Q8TE73 4624 aa7.61□□□□□ -1.19
CCNL1-216ENST00000475298 DNAH11Q96DT5 4516 aa7.61□□□□□ -1.19
CCNL1-216ENST00000475298 KRTAP10-2P60368 255 aa7.6□□□□□ -1.19
CCNL1-216ENST00000475298 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
CCNL1-216ENST00000475298 IGLV7-43P04211 117 aa7.59□□□□□ -1.2
CCNL1-216ENST00000475298 DMAC1Q96GE9 116 aa7.57□□□□□ -1.2
CCNL1-216ENST00000475298 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
CCNL1-216ENST00000475298 HYDINQ4G0P3 5121 aa7.56□□□□□ -1.2
CCNL1-216ENST00000475298 UQCR11O14957 56 aa7.55□□□□□ -1.2
CCNL1-216ENST00000475298 SPINK6Q6UWN8 80 aa7.55□□□□□ -1.2
CCNL1-216ENST00000475298 CDK2AP2O75956 126 aa7.53□□□□□ -1.2
CCNL1-216ENST00000475298 PKD1P98161 4303 aa7.52□□□□□ -1.21
CCNL1-216ENST00000475298 LRP1BQ9NZR2 4599 aa7.52□□□□□ -1.21
CCNL1-216ENST00000475298 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
CCNL1-216ENST00000475298 KRTAP10-1P60331 282 aa7.48□□□□□ -1.21
CCNL1-216ENST00000475298 KRTAP13-2Q52LG2 175 aa7.43□□□□□ -1.22
CCNL1-216ENST00000475298 Q6ZSA8 131 aa7.42□□□□□ -1.22
CCNL1-216ENST00000475298 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
CCNL1-216ENST00000475298 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
CCNL1-216ENST00000475298 ROMO1P60602 79 aa7.39□□□□□ -1.23
CCNL1-216ENST00000475298 PKHD1P08F94 4074 aa7.37□□□□□ -1.23
CCNL1-216ENST00000475298 IGKV2-30P06310 120 aa7.37□□□□□ -1.23
CCNL1-216ENST00000475298 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
CCNL1-216ENST00000475298 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
CCNL1-216ENST00000475298 A8MUU9 505 aa7.32□□□□□ -1.24
CCNL1-216ENST00000475298 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
CCNL1-216ENST00000475298 SACSQ9NZJ4 4579 aa7.29□□□□□ -1.24
CCNL1-216ENST00000475298 LINC00304Q8N9R0 145 aa7.28□□□□□ -1.24
CCNL1-216ENST00000475298 H0YAA0 97 aa7.26□□□□□ -1.25
CCNL1-216ENST00000475298 KRTAP16-1A8MUX0 517 aa7.24□□□□□ -1.25
CCNL1-216ENST00000475298 P0C880 135 aa7.24□□□□□ -1.25
CCNL1-216ENST00000475298 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
CCNL1-216ENST00000475298 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
CCNL1-216ENST00000475298 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
CCNL1-216ENST00000475298 DYNC1H1Q14204 4646 aaKnown RBP7.21□□□□□ -1.26
CCNL1-216ENST00000475298 BIRC6Q9NR09 4857 aa7.19□□□□□ -1.26
CCNL1-216ENST00000475298 SPINK1P00995 79 aa7.19□□□□□ -1.26
CCNL1-216ENST00000475298 FAT1Q14517 4588 aa7.18□□□□□ -1.26
CCNL1-216ENST00000475298 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
CCNL1-216ENST00000475298 CRIPTQ9P021 101 aa7.13□□□□□ -1.27
CCNL1-216ENST00000475298 KRTAP17-1Q9BYP8 105 aa7.12□□□□□ -1.27
CCNL1-216ENST00000475298 APOBP04114 4563 aaKnown RBP7.12□□□□□ -1.27
CCNL1-216ENST00000475298 Q8N1X5 172 aa7.1□□□□□ -1.27
CCNL1-216ENST00000475298 A0A1B0GVY2 172 aa7.08□□□□□ -1.28
CCNL1-216ENST00000475298 A0A1B0GU33 70 aa7.07□□□□□ -1.28
CCNL1-216ENST00000475298 RYR3Q15413 4870 aa7.06□□□□□ -1.28
CCNL1-216ENST00000475298 KMT2CQ8NEZ4 4911 aaKnown RBP7.06□□□□□ -1.28
CCNL1-216ENST00000475298 KRTAP10-4P60372 401 aaPredicted RBP7.05□□□□□ -1.28
CCNL1-216ENST00000475298 RYR2Q92736 4967 aa7.04□□□□□ -1.28
CCNL1-216ENST00000475298 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
CCNL1-216ENST00000475298 H1FX-AS1Q4G0G2 97 aa7.03□□□□□ -1.28
CCNL1-216ENST00000475298 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
CCNL1-216ENST00000475298 RPS29P62273 56 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms