RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 SMCPP49901 116 aaPredicted RBP9.07□□□□□ -0.96
PCGF3-209ENST00000475288 SS18L2Q9UHA2 77 aa9.05□□□□□ -0.96
PCGF3-209ENST00000475288 MTURNQ8N3F0 131 aa9.03□□□□□ -0.96
PCGF3-209ENST00000475288 FCGBPQ9Y6R7 5405 aaPredicted RBP9.02□□□□□ -0.97
PCGF3-209ENST00000475288 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
PCGF3-209ENST00000475288 TEN1Q86WV5 123 aa9.01□□□□□ -0.97
PCGF3-209ENST00000475288 JMJD7-PLA2G4BH0Y9G9 81 aa9□□□□□ -0.97
PCGF3-209ENST00000475288 MT2AP02795 61 aa9□□□□□ -0.97
PCGF3-209ENST00000475288 C21orf62-AS1Q17RA5 79 aa8.97□□□□□ -0.97
PCGF3-209ENST00000475288 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
PCGF3-209ENST00000475288 KRTAP19-1Q8IUB9 90 aa8.95□□□□□ -0.98
PCGF3-209ENST00000475288 TRBV7-4A0A0J9YYF1 115 aa8.94□□□□□ -0.98
PCGF3-209ENST00000475288 LCE2BO14633 110 aa8.94□□□□□ -0.98
PCGF3-209ENST00000475288 PDE6GP18545 87 aa8.94□□□□□ -0.98
PCGF3-209ENST00000475288 RBM3P98179 157 aaKnown RBP8.94□□□□□ -0.98
PCGF3-209ENST00000475288 LOC110117498A0A087WWA1 95 aa8.93□□□□□ -0.98
PCGF3-209ENST00000475288 MT1FP04733 61 aa8.92□□□□□ -0.98
PCGF3-209ENST00000475288 MPLKIPQ8TAP9 179 aa8.91□□□□□ -0.98
PCGF3-209ENST00000475288 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
PCGF3-209ENST00000475288 A0A087WSZ3 146 aa8.9□□□□□ -0.98
PCGF3-209ENST00000475288 DSCR8Q96T75 97 aa8.9□□□□□ -0.98
PCGF3-209ENST00000475288 FAM236DA0A1B0GTK5 79 aa8.89□□□□□ -0.99
PCGF3-209ENST00000475288 FAM236CP0DP71 79 aa8.89□□□□□ -0.99
PCGF3-209ENST00000475288 DSCR10P59022 87 aa8.89□□□□□ -0.99
PCGF3-209ENST00000475288 KRTAP16-1A8MUX0 517 aa8.88□□□□□ -0.99
PCGF3-209ENST00000475288 Q6ZQT0 140 aa8.87□□□□□ -0.99
PCGF3-209ENST00000475288 C14orf132Q9NPU4 83 aa8.87□□□□□ -0.99
PCGF3-209ENST00000475288 RBM12B-AS1Q9P1G2 102 aa8.87□□□□□ -0.99
PCGF3-209ENST00000475288 A0A1B0GW54 56 aa8.86□□□□□ -0.99
PCGF3-209ENST00000475288 HRES1P13985 223 aa8.85□□□□□ -0.99
PCGF3-209ENST00000475288 KRTAP10-10P60014 251 aa8.85□□□□□ -0.99
PCGF3-209ENST00000475288 LINC00313P59037 77 aa8.84□□□□□ -0.99
PCGF3-209ENST00000475288 CCKP06307 115 aa8.83□□□□□ -1
PCGF3-209ENST00000475288 SYNE2Q8WXH0 6885 aaKnown RBP8.82□□□□□ -1
PCGF3-209ENST00000475288 A0A1B0GV72 72 aa8.82□□□□□ -1
PCGF3-209ENST00000475288 SIGMAR1Q99720 223 aa8.82□□□□□ -1
PCGF3-209ENST00000475288 FAM240AA0A1B0GVK7 77 aa8.81□□□□□ -1
PCGF3-209ENST00000475288 MACF1Q9UPN3 7388 aaKnown RBP8.81□□□□□ -1
PCGF3-209ENST00000475288 A0A1W2PNM2 257 aa8.8□□□□□ -1
PCGF3-209ENST00000475288 J3QR89 54 aa8.8□□□□□ -1
PCGF3-209ENST00000475288 NOTCH2NLQ7Z3S9 236 aa8.78□□□□□ -1
PCGF3-209ENST00000475288 LINC00846Q9NV44 126 aa8.78□□□□□ -1
PCGF3-209ENST00000475288 ACYP1P07311 99 aa8.77□□□□□ -1.01
PCGF3-209ENST00000475288 IGKV4-1P06312 121 aa8.76□□□□□ -1.01
PCGF3-209ENST00000475288 K7ERU9 68 aa8.75□□□□□ -1.01
PCGF3-209ENST00000475288 KRTAP19-6Q3LI70 58 aa8.74□□□□□ -1.01
PCGF3-209ENST00000475288 VPS25Q9BRG1 176 aa8.72□□□□□ -1.01
PCGF3-209ENST00000475288 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
PCGF3-209ENST00000475288 IGHV6-1A0A0B4J1U7 121 aa8.64□□□□□ -1.03
PCGF3-209ENST00000475288 C8orf87E5RJ46 101 aa8.64□□□□□ -1.03
PCGF3-209ENST00000475288 UBL5Q9BZL1 73 aa8.64□□□□□ -1.03
PCGF3-209ENST00000475288 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
PCGF3-209ENST00000475288 Q6ZVQ6 151 aa8.62□□□□□ -1.03
PCGF3-209ENST00000475288 A8MWP4 228 aa8.61□□□□□ -1.03
PCGF3-209ENST00000475288 NREPQ16612 68 aa8.61□□□□□ -1.03
PCGF3-209ENST00000475288 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
PCGF3-209ENST00000475288 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
PCGF3-209ENST00000475288 J3KT08 172 aa8.58□□□□□ -1.04
PCGF3-209ENST00000475288 SPINK7P58062 85 aa8.58□□□□□ -1.04
PCGF3-209ENST00000475288 ATP5EP2Q5VTU8 51 aa8.58□□□□□ -1.04
PCGF3-209ENST00000475288 LINC00643Q86TS7 51 aa8.58□□□□□ -1.04
PCGF3-209ENST00000475288 KRTAP6-3Q3LI67 103 aa8.56□□□□□ -1.04
PCGF3-209ENST00000475288 CXCL6P80162 114 aa8.55□□□□□ -1.04
PCGF3-209ENST00000475288 BPY2O14599 106 aa8.52□□□□□ -1.05
PCGF3-209ENST00000475288 Q8N9P0 234 aaPredicted RBP8.51□□□□□ -1.05
PCGF3-209ENST00000475288 WFDC13Q8IUB5 93 aa8.47□□□□□ -1.05
PCGF3-209ENST00000475288 NDUFB1O75438 58 aa8.44□□□□□ -1.06
PCGF3-209ENST00000475288 IMUPQ9GZP8 106 aa8.44□□□□□ -1.06
PCGF3-209ENST00000475288 PRR15Q8IV56 129 aa8.43□□□□□ -1.06
PCGF3-209ENST00000475288 IGKV3D-7A0A0C4DH55 119 aa8.42□□□□□ -1.06
PCGF3-209ENST00000475288 K7EQZ3 153 aa8.4□□□□□ -1.06
PCGF3-209ENST00000475288 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
PCGF3-209ENST00000475288 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
PCGF3-209ENST00000475288 Q8N9L7 120 aa8.36□□□□□ -1.07
PCGF3-209ENST00000475288 NEBP20929 6669 aa8.35□□□□□ -1.07
PCGF3-209ENST00000475288 H1FX-AS1Q4G0G2 97 aa8.35□□□□□ -1.07
PCGF3-209ENST00000475288 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
PCGF3-209ENST00000475288 HIST1H4AP62805 103 aaKnown RBP8.32□□□□□ -1.08
PCGF3-209ENST00000475288 HCG22E2RYF7 251 aa8.3□□□□□ -1.08
PCGF3-209ENST00000475288 A0A087WVE0 104 aa8.28□□□□□ -1.08
PCGF3-209ENST00000475288 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
PCGF3-209ENST00000475288 hDV103S1A0JD37 113 aa8.26□□□□□ -1.09
PCGF3-209ENST00000475288 CASC2Q6XLA1 102 aa8.26□□□□□ -1.09
PCGF3-209ENST00000475288 MRPL34Q9BQ48 92 aaKnown RBP8.23□□□□□ -1.09
PCGF3-209ENST00000475288 FAM236AA0A1B0GUQ0 79 aa8.19□□□□□ -1.1
PCGF3-209ENST00000475288 FAM236BA0A1B0GV22 79 aa8.19□□□□□ -1.1
PCGF3-209ENST00000475288 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
PCGF3-209ENST00000475288 KRTAP20-1Q3LI63 56 aa8.18□□□□□ -1.1
PCGF3-209ENST00000475288 MUC12Q9UKN1 5478 aa8.17□□□□□ -1.1
PCGF3-209ENST00000475288 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
PCGF3-209ENST00000475288 A6NN06 94 aa8.14□□□□□ -1.11
PCGF3-209ENST00000475288 ATOX1O00244 68 aa8.14□□□□□ -1.11
PCGF3-209ENST00000475288 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
PCGF3-209ENST00000475288 SMIM20Q8N5G0 67 aa8.14□□□□□ -1.11
PCGF3-209ENST00000475288 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
PCGF3-209ENST00000475288 IGKV2D-30A0A075B6S6 120 aa8.1□□□□□ -1.11
PCGF3-209ENST00000475288 NDUFS5O43920 106 aa8.1□□□□□ -1.11
PCGF3-209ENST00000475288 IGKV2-30P06310 120 aa8.1□□□□□ -1.11
PCGF3-209ENST00000475288 MT1BP07438 61 aa8.1□□□□□ -1.11
PCGF3-209ENST00000475288 UQCRQO14949 82 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms