RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
SEMA4D-217ENST00000475255 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
SEMA4D-217ENST00000475255 C8orf87E5RJ46 101 aa8.18□□□□□ -1.1
SEMA4D-217ENST00000475255 Q5W150 140 aa8.18□□□□□ -1.1
SEMA4D-217ENST00000475255 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
SEMA4D-217ENST00000475255 Q6ZR54 194 aa8.17□□□□□ -1.1
SEMA4D-217ENST00000475255 NBDYA0A0U1RRE5 68 aa8.16□□□□□ -1.1
SEMA4D-217ENST00000475255 A6NN06 94 aa8.16□□□□□ -1.1
SEMA4D-217ENST00000475255 WWC2-AS2Q96NR7 200 aa8.16□□□□□ -1.1
SEMA4D-217ENST00000475255 PSORS1C2Q9UIG4 136 aa8.16□□□□□ -1.1
SEMA4D-217ENST00000475255 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
SEMA4D-217ENST00000475255 MDFIQ99750 246 aa8.15□□□□□ -1.1
SEMA4D-217ENST00000475255 CIRBP-AS1Q8TBR5 109 aa8.14□□□□□ -1.11
SEMA4D-217ENST00000475255 SPACA4Q8TDM5 124 aa8.14□□□□□ -1.11
SEMA4D-217ENST00000475255 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
SEMA4D-217ENST00000475255 PRAC1Q96KF2 57 aa8.12□□□□□ -1.11
SEMA4D-217ENST00000475255 FBN3Q75N90 2809 aa8.12□□□□□ -1.11
SEMA4D-217ENST00000475255 PLAC8Q9NZF1 115 aa8.1□□□□□ -1.11
SEMA4D-217ENST00000475255 LINC00483Q53H64 154 aa8.09□□□□□ -1.12
SEMA4D-217ENST00000475255 MEGF8Q7Z7M0 2845 aa8.07□□□□□ -1.12
SEMA4D-217ENST00000475255 C7orf65Q6ZTY9 151 aa8.07□□□□□ -1.12
SEMA4D-217ENST00000475255 DNAH17Q9UFH2 4485 aa8.07□□□□□ -1.12
SEMA4D-217ENST00000475255 STARD9Q9P2P6 4700 aa8.07□□□□□ -1.12
SEMA4D-217ENST00000475255 ADM2Q7Z4H4 148 aa8.06□□□□□ -1.12
SEMA4D-217ENST00000475255 IGLV5-52A0A0A0MRZ9 124 aa8.06□□□□□ -1.12
SEMA4D-217ENST00000475255 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
SEMA4D-217ENST00000475255 A0A087WTM6 91 aa8.05□□□□□ -1.12
SEMA4D-217ENST00000475255 RTL8CO15255 209 aa8.05□□□□□ -1.12
SEMA4D-217ENST00000475255 ZNF861PO60384 105 aa8.04□□□□□ -1.12
SEMA4D-217ENST00000475255 HECTD4Q9Y4D8 3996 aa8.04□□□□□ -1.12
SEMA4D-217ENST00000475255 ZNF706Q9Y5V0 76 aaPredicted RBP8.03□□□□□ -1.12
SEMA4D-217ENST00000475255 A0A0A0MQY5 61 aa8.02□□□□□ -1.13
SEMA4D-217ENST00000475255 LINC00313P59037 77 aa8.01□□□□□ -1.13
SEMA4D-217ENST00000475255 DNAH2Q9P225 4427 aa8.01□□□□□ -1.13
SEMA4D-217ENST00000475255 J3QL48 77 aa8□□□□□ -1.13
SEMA4D-217ENST00000475255 ACYP2P14621 99 aa8□□□□□ -1.13
SEMA4D-217ENST00000475255 DYNC2H1Q8NCM8 4307 aaKnown RBP8□□□□□ -1.13
SEMA4D-217ENST00000475255 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
SEMA4D-217ENST00000475255 A0A1B0GU69 56 aa7.98□□□□□ -1.13
SEMA4D-217ENST00000475255 VPS13DQ5THJ4 4388 aa7.97□□□□□ -1.13
SEMA4D-217ENST00000475255 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
SEMA4D-217ENST00000475255 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
SEMA4D-217ENST00000475255 SPINK1P00995 79 aa7.94□□□□□ -1.14
SEMA4D-217ENST00000475255 DNAH6Q9C0G6 4158 aa7.94□□□□□ -1.14
SEMA4D-217ENST00000475255 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
SEMA4D-217ENST00000475255 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
SEMA4D-217ENST00000475255 ALMS1Q8TCU4 4167 aa7.92□□□□□ -1.14
SEMA4D-217ENST00000475255 PRKDCP78527 4128 aaKnown RBP7.92□□□□□ -1.14
SEMA4D-217ENST00000475255 DNAH11Q96DT5 4516 aa7.9□□□□□ -1.15
SEMA4D-217ENST00000475255 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
SEMA4D-217ENST00000475255 MIR22HGQ0VDD5 57 aa7.85□□□□□ -1.15
SEMA4D-217ENST00000475255 FAM229AH3BQW9 127 aa7.83□□□□□ -1.16
SEMA4D-217ENST00000475255 KRTAP13-2Q52LG2 175 aa7.82□□□□□ -1.16
SEMA4D-217ENST00000475255 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
SEMA4D-217ENST00000475255 UQCR11O14957 56 aa7.8□□□□□ -1.16
SEMA4D-217ENST00000475255 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
SEMA4D-217ENST00000475255 C1orf134Q5TEV5 83 aa7.79□□□□□ -1.16
SEMA4D-217ENST00000475255 SSBP3-AS1Q7Z2R9 100 aa7.79□□□□□ -1.16
SEMA4D-217ENST00000475255 Q8N1X5 172 aa7.79□□□□□ -1.16
SEMA4D-217ENST00000475255 LY6G6CO95867 125 aa7.79□□□□□ -1.16
SEMA4D-217ENST00000475255 DNAH5Q8TE73 4624 aa7.78□□□□□ -1.16
SEMA4D-217ENST00000475255 FLG2Q5D862 2391 aaPredicted RBP7.76□□□□□ -1.17
SEMA4D-217ENST00000475255 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
SEMA4D-217ENST00000475255 SPATA8Q6RVD6 105 aa7.75□□□□□ -1.17
SEMA4D-217ENST00000475255 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
SEMA4D-217ENST00000475255 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
SEMA4D-217ENST00000475255 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
SEMA4D-217ENST00000475255 KRTAP10-1P60331 282 aa7.67□□□□□ -1.18
SEMA4D-217ENST00000475255 VPS13BQ7Z7G8 4022 aa7.65□□□□□ -1.18
SEMA4D-217ENST00000475255 KRTAP1-4P0C5Y4 121 aa7.63□□□□□ -1.19
SEMA4D-217ENST00000475255 FAT2Q9NYQ8 4349 aa7.62□□□□□ -1.19
SEMA4D-217ENST00000475255 HYDINQ4G0P3 5121 aa7.61□□□□□ -1.19
SEMA4D-217ENST00000475255 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
SEMA4D-217ENST00000475255 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
SEMA4D-217ENST00000475255 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
SEMA4D-217ENST00000475255 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
SEMA4D-217ENST00000475255 C9orf92A6NGG3 77 aa7.58□□□□□ -1.2
SEMA4D-217ENST00000475255 PKD1P98161 4303 aa7.54□□□□□ -1.2
SEMA4D-217ENST00000475255 Q6ZSA8 131 aa7.53□□□□□ -1.2
SEMA4D-217ENST00000475255 H0YAA0 97 aa7.51□□□□□ -1.21
SEMA4D-217ENST00000475255 PKHD1P08F94 4074 aa7.48□□□□□ -1.21
SEMA4D-217ENST00000475255 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
SEMA4D-217ENST00000475255 A0A1B0GU33 70 aa7.45□□□□□ -1.22
SEMA4D-217ENST00000475255 FAT1Q14517 4588 aa7.44□□□□□ -1.22
SEMA4D-217ENST00000475255 LINC00304Q8N9R0 145 aa7.44□□□□□ -1.22
SEMA4D-217ENST00000475255 KRTAP3-1Q9BYR8 98 aa7.44□□□□□ -1.22
SEMA4D-217ENST00000475255 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
SEMA4D-217ENST00000475255 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
SEMA4D-217ENST00000475255 A8MUU9 505 aa7.4□□□□□ -1.23
SEMA4D-217ENST00000475255 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
SEMA4D-217ENST00000475255 H1FX-AS1Q4G0G2 97 aa7.35□□□□□ -1.23
SEMA4D-217ENST00000475255 A0A0D9SG42 100 aa7.32□□□□□ -1.24
SEMA4D-217ENST00000475255 SACSQ9NZJ4 4579 aa7.29□□□□□ -1.24
SEMA4D-217ENST00000475255 LCE2DQ5TA82 110 aaPredicted RBP7.29□□□□□ -1.24
SEMA4D-217ENST00000475255 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
SEMA4D-217ENST00000475255 K7ERS5 55 aa7.28□□□□□ -1.24
SEMA4D-217ENST00000475255 ROMO1P60602 79 aa7.26□□□□□ -1.25
SEMA4D-217ENST00000475255 C20orf166-AS1Q96NR2 134 aa7.26□□□□□ -1.25
SEMA4D-217ENST00000475255 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
SEMA4D-217ENST00000475255 MYCBP2O75592 4640 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms