RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
HLA-DOB-208ENST00000475235 PDE6GP18545 87 aa7.1□□□□□ -1.27
HLA-DOB-208ENST00000475235 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
HLA-DOB-208ENST00000475235 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
HLA-DOB-208ENST00000475235 MT1HL1P0DM35 61 aa7.09□□□□□ -1.27
HLA-DOB-208ENST00000475235 PSORS1C2Q9UIG4 136 aa7.09□□□□□ -1.27
HLA-DOB-208ENST00000475235 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
HLA-DOB-208ENST00000475235 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
HLA-DOB-208ENST00000475235 A8MU10 97 aa7.07□□□□□ -1.28
HLA-DOB-208ENST00000475235 C1orf137Q5JT78 98 aa7.07□□□□□ -1.28
HLA-DOB-208ENST00000475235 SMIM1B2RUZ4 78 aa7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 LINC01547P58512 204 aaPredicted RBP7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 OCR1Q9BZK8 76 aa7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 SND1-IT1Q9HBX3 110 aa7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 BPY2O14599 106 aa7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 ZNF625Q96I27 306 aaPredicted RBP7.06□□□□□ -1.28
HLA-DOB-208ENST00000475235 H3BQ85 93 aa7.05□□□□□ -1.28
HLA-DOB-208ENST00000475235 COX7B2Q8TF08 81 aa7.05□□□□□ -1.28
HLA-DOB-208ENST00000475235 ORMDL1Q9P0S3 153 aa7.05□□□□□ -1.28
HLA-DOB-208ENST00000475235 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
HLA-DOB-208ENST00000475235 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
HLA-DOB-208ENST00000475235 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
HLA-DOB-208ENST00000475235 FAM218AQ96MZ4 157 aa7.03□□□□□ -1.28
HLA-DOB-208ENST00000475235 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
HLA-DOB-208ENST00000475235 PRR15LQ9BU68 103 aa7.03□□□□□ -1.28
HLA-DOB-208ENST00000475235 LOC110117498A0A087WWA1 95 aa7.02□□□□□ -1.29
HLA-DOB-208ENST00000475235 SPANXA2-OT1Q8N9U9 137 aa7.01□□□□□ -1.29
HLA-DOB-208ENST00000475235 ZCCHC13Q8WW36 166 aaKnown RBP7.01□□□□□ -1.29
HLA-DOB-208ENST00000475235 TNXBP22105 4242 aa7.01□□□□□ -1.29
HLA-DOB-208ENST00000475235 KRTAP10-8P60410 259 aa7.01□□□□□ -1.29
HLA-DOB-208ENST00000475235 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
HLA-DOB-208ENST00000475235 IGLV9-49A0A0B4J1Y8 123 aa7□□□□□ -1.29
HLA-DOB-208ENST00000475235 IGLV5-39A0A0G2JS06 123 aa7□□□□□ -1.29
HLA-DOB-208ENST00000475235 KRTAP16-1A8MUX0 517 aa7□□□□□ -1.29
HLA-DOB-208ENST00000475235 MIR7-3HGQ8N6C7 128 aa6.98□□□□□ -1.29
HLA-DOB-208ENST00000475235 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
HLA-DOB-208ENST00000475235 ROMO1P60602 79 aa6.96□□□□□ -1.29
HLA-DOB-208ENST00000475235 LINC00308Q8TCZ7 52 aa6.96□□□□□ -1.29
HLA-DOB-208ENST00000475235 COX17Q14061 63 aa6.96□□□□□ -1.3
HLA-DOB-208ENST00000475235 LINC01558Q9Y6Z2 57 aa6.96□□□□□ -1.3
HLA-DOB-208ENST00000475235 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
HLA-DOB-208ENST00000475235 ZNF861PO60384 105 aa6.95□□□□□ -1.3
HLA-DOB-208ENST00000475235 PRAC1Q96KF2 57 aa6.95□□□□□ -1.3
HLA-DOB-208ENST00000475235 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
HLA-DOB-208ENST00000475235 IGLV1-50A0A075B6I6 118 aa6.93□□□□□ -1.3
HLA-DOB-208ENST00000475235 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
HLA-DOB-208ENST00000475235 NCR3O14931 201 aa6.93□□□□□ -1.3
HLA-DOB-208ENST00000475235 LINC00208Q96KT6 92 aa6.92□□□□□ -1.3
HLA-DOB-208ENST00000475235 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
HLA-DOB-208ENST00000475235 UBR4Q5T4S7 5183 aa6.92□□□□□ -1.3
HLA-DOB-208ENST00000475235 KRTAP9-6A0A140TA67 174 aa6.91□□□□□ -1.3
HLA-DOB-208ENST00000475235 Q6ZQT0 140 aa6.91□□□□□ -1.3
HLA-DOB-208ENST00000475235 KRTAP19-1Q8IUB9 90 aa6.91□□□□□ -1.3
HLA-DOB-208ENST00000475235 RPL37AP8A6NKH3 93 aa6.91□□□□□ -1.3
HLA-DOB-208ENST00000475235 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
HLA-DOB-208ENST00000475235 LINC00158P58513 81 aa6.88□□□□□ -1.31
HLA-DOB-208ENST00000475235 IGKV2-28A0A075B6P5 120 aa6.87□□□□□ -1.31
HLA-DOB-208ENST00000475235 H3BPC8 53 aa6.87□□□□□ -1.31
HLA-DOB-208ENST00000475235 IGKV2D-28P01615 120 aa6.87□□□□□ -1.31
HLA-DOB-208ENST00000475235 Q8NDZ9 215 aa6.87□□□□□ -1.31
HLA-DOB-208ENST00000475235 KRTAP13-1Q8IUC0 172 aa6.85□□□□□ -1.31
HLA-DOB-208ENST00000475235 LRP2P98164 4655 aa6.83□□□□□ -1.32
HLA-DOB-208ENST00000475235 A0A087WSZ3 146 aa6.82□□□□□ -1.32
HLA-DOB-208ENST00000475235 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
HLA-DOB-208ENST00000475235 PRLHP81277 87 aa6.81□□□□□ -1.32
HLA-DOB-208ENST00000475235 LCE3BQ5TA77 95 aa6.8□□□□□ -1.32
HLA-DOB-208ENST00000475235 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
HLA-DOB-208ENST00000475235 ETDCA0A1B0GVM5 59 aa6.79□□□□□ -1.32
HLA-DOB-208ENST00000475235 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
HLA-DOB-208ENST00000475235 SPAG11AQ6PDA7 123 aa6.79□□□□□ -1.32
HLA-DOB-208ENST00000475235 TYMSOSQ8TAI1 123 aa6.79□□□□□ -1.32
HLA-DOB-208ENST00000475235 K7ERS5 55 aa6.78□□□□□ -1.32
HLA-DOB-208ENST00000475235 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
HLA-DOB-208ENST00000475235 KCNQ1DNQ9H478 68 aa6.76□□□□□ -1.33
HLA-DOB-208ENST00000475235 CSAG1Q6PB30 78 aa6.76□□□□□ -1.33
HLA-DOB-208ENST00000475235 ANAPC11Q9NYG5 84 aa6.76□□□□□ -1.33
HLA-DOB-208ENST00000475235 SPRR1AP35321 89 aa6.75□□□□□ -1.33
HLA-DOB-208ENST00000475235 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
HLA-DOB-208ENST00000475235 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
HLA-DOB-208ENST00000475235 PRR4Q16378 134 aa6.73□□□□□ -1.33
HLA-DOB-208ENST00000475235 RNF213Q63HN8 5207 aa6.72□□□□□ -1.33
HLA-DOB-208ENST00000475235 H0Y9P7 68 aa6.72□□□□□ -1.33
HLA-DOB-208ENST00000475235 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.72□□□□□ -1.33
HLA-DOB-208ENST00000475235 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.33
HLA-DOB-208ENST00000475235 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.33
HLA-DOB-208ENST00000475235 SPRR4Q96PI1 79 aa6.71□□□□□ -1.33
HLA-DOB-208ENST00000475235 C8orf17Q9NRJ1 99 aa6.71□□□□□ -1.34
HLA-DOB-208ENST00000475235 LPAP08519 4548 aa6.7□□□□□ -1.34
HLA-DOB-208ENST00000475235 SPINK7P58062 85 aa6.69□□□□□ -1.34
HLA-DOB-208ENST00000475235 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
HLA-DOB-208ENST00000475235 LUZP6Q538Z0 58 aa6.68□□□□□ -1.34
HLA-DOB-208ENST00000475235 SPATA8Q6RVD6 105 aa6.68□□□□□ -1.34
HLA-DOB-208ENST00000475235 IGLV6-57P01721 117 aa6.67□□□□□ -1.34
HLA-DOB-208ENST00000475235 A8MWP4 228 aa6.66□□□□□ -1.34
HLA-DOB-208ENST00000475235 COA5Q86WW8 74 aa6.66□□□□□ -1.34
HLA-DOB-208ENST00000475235 Q6ZRX8 168 aa6.66□□□□□ -1.34
HLA-DOB-208ENST00000475235 COX7BP24311 80 aa6.65□□□□□ -1.35
HLA-DOB-208ENST00000475235 LINC00483Q53H64 154 aa6.65□□□□□ -1.35
HLA-DOB-208ENST00000475235 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms