RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 UBL5Q9BZL1 73 aa6.04□□□□□ -1.44
SEMA4D-216ENST00000474258 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
SEMA4D-216ENST00000474258 Q6ZVQ6 151 aa6.03□□□□□ -1.44
SEMA4D-216ENST00000474258 A0A087WSZ3 146 aa6.02□□□□□ -1.45
SEMA4D-216ENST00000474258 PCOTHQ58A44 107 aa6.02□□□□□ -1.45
SEMA4D-216ENST00000474258 NREPQ16612 68 aa6.01□□□□□ -1.45
SEMA4D-216ENST00000474258 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
SEMA4D-216ENST00000474258 Q5XG85 94 aa6.01□□□□□ -1.45
SEMA4D-216ENST00000474258 LCE2CQ5TA81 110 aa6□□□□□ -1.45
SEMA4D-216ENST00000474258 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
SEMA4D-216ENST00000474258 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
SEMA4D-216ENST00000474258 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
SEMA4D-216ENST00000474258 SIGMAR1Q99720 223 aa5.98□□□□□ -1.45
SEMA4D-216ENST00000474258 SS18L2Q9UHA2 77 aa5.98□□□□□ -1.45
SEMA4D-216ENST00000474258 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
SEMA4D-216ENST00000474258 CXCL6P80162 114 aa5.97□□□□□ -1.45
SEMA4D-216ENST00000474258 C1orf195Q5TG92 126 aa5.97□□□□□ -1.45
SEMA4D-216ENST00000474258 BPY2O14599 106 aa5.95□□□□□ -1.46
SEMA4D-216ENST00000474258 IMUPQ9GZP8 106 aa5.95□□□□□ -1.46
SEMA4D-216ENST00000474258 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
SEMA4D-216ENST00000474258 J3KT08 172 aa5.94□□□□□ -1.46
SEMA4D-216ENST00000474258 MT1HP80294 61 aa5.94□□□□□ -1.46
SEMA4D-216ENST00000474258 Q96NJ1 140 aa5.94□□□□□ -1.46
SEMA4D-216ENST00000474258 DSCR10P59022 87 aa5.92□□□□□ -1.46
SEMA4D-216ENST00000474258 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
SEMA4D-216ENST00000474258 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
SEMA4D-216ENST00000474258 DEFB116Q30KQ4 102 aa5.89□□□□□ -1.47
SEMA4D-216ENST00000474258 A8MWP4 228 aa5.88□□□□□ -1.47
SEMA4D-216ENST00000474258 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
SEMA4D-216ENST00000474258 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
SEMA4D-216ENST00000474258 KRTAP10-6P60371 365 aaPredicted RBP5.86□□□□□ -1.47
SEMA4D-216ENST00000474258 HIST1H4AP62805 103 aaKnown RBP5.86□□□□□ -1.47
SEMA4D-216ENST00000474258 COX6B2Q6YFQ2 88 aa5.86□□□□□ -1.47
SEMA4D-216ENST00000474258 K7EQZ3 153 aa5.85□□□□□ -1.47
SEMA4D-216ENST00000474258 M0R2T5 61 aa5.85□□□□□ -1.47
SEMA4D-216ENST00000474258 NDUFB1O75438 58 aa5.85□□□□□ -1.47
SEMA4D-216ENST00000474258 LORP23490 312 aaPredicted RBP5.85□□□□□ -1.47
SEMA4D-216ENST00000474258 Q8N9L7 120 aa5.85□□□□□ -1.47
SEMA4D-216ENST00000474258 SCGB1A1P11684 91 aa5.84□□□□□ -1.47
SEMA4D-216ENST00000474258 A0A087WVE0 104 aa5.83□□□□□ -1.48
SEMA4D-216ENST00000474258 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
SEMA4D-216ENST00000474258 ATP11AUNQ6ZP68 121 aa5.81□□□□□ -1.48
SEMA4D-216ENST00000474258 Q75L30 129 aa5.8□□□□□ -1.48
SEMA4D-216ENST00000474258 C8orf17Q9NRJ1 99 aa5.79□□□□□ -1.48
SEMA4D-216ENST00000474258 FLGP20930 4061 aaPredicted RBP5.79□□□□□ -1.48
SEMA4D-216ENST00000474258 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
SEMA4D-216ENST00000474258 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
SEMA4D-216ENST00000474258 HCG22E2RYF7 251 aa5.78□□□□□ -1.48
SEMA4D-216ENST00000474258 C8orf87E5RJ46 101 aa5.78□□□□□ -1.48
SEMA4D-216ENST00000474258 FSIP2Q5CZC0 6907 aa5.78□□□□□ -1.48
SEMA4D-216ENST00000474258 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
SEMA4D-216ENST00000474258 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
SEMA4D-216ENST00000474258 NOTCH2NLQ7Z3S9 236 aa5.77□□□□□ -1.49
SEMA4D-216ENST00000474258 LINC00313P59037 77 aa5.75□□□□□ -1.49
SEMA4D-216ENST00000474258 CASC2Q6XLA1 102 aa5.75□□□□□ -1.49
SEMA4D-216ENST00000474258 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
SEMA4D-216ENST00000474258 ATOX1O00244 68 aa5.73□□□□□ -1.49
SEMA4D-216ENST00000474258 WFDC13Q8IUB5 93 aa5.73□□□□□ -1.49
SEMA4D-216ENST00000474258 TMEM254Q8TBM7 123 aa5.73□□□□□ -1.49
SEMA4D-216ENST00000474258 KRTAP16-1A8MUX0 517 aa5.72□□□□□ -1.49
SEMA4D-216ENST00000474258 C20orf166-AS1Q96NR2 134 aa5.72□□□□□ -1.49
SEMA4D-216ENST00000474258 SMIM20Q8N5G0 67 aa5.71□□□□□ -1.5
SEMA4D-216ENST00000474258 MRPL34Q9BQ48 92 aaKnown RBP5.71□□□□□ -1.5
SEMA4D-216ENST00000474258 A8MUU9 505 aa5.7□□□□□ -1.5
SEMA4D-216ENST00000474258 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
SEMA4D-216ENST00000474258 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
SEMA4D-216ENST00000474258 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
SEMA4D-216ENST00000474258 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
SEMA4D-216ENST00000474258 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
SEMA4D-216ENST00000474258 TP53AIP1Q9HCN2 124 aa5.66□□□□□ -1.5
SEMA4D-216ENST00000474258 UQCRQO14949 82 aa5.65□□□□□ -1.5
SEMA4D-216ENST00000474258 COX7CP15954 63 aa5.63□□□□□ -1.51
SEMA4D-216ENST00000474258 C5orf47Q569G3 176 aa5.62□□□□□ -1.51
SEMA4D-216ENST00000474258 NDUFS5O43920 106 aa5.61□□□□□ -1.51
SEMA4D-216ENST00000474258 KRTAP9-8Q9BYQ0 159 aa5.61□□□□□ -1.51
SEMA4D-216ENST00000474258 PCP4P48539 62 aa5.6□□□□□ -1.51
SEMA4D-216ENST00000474258 FAM236DA0A1B0GTK5 79 aa5.58□□□□□ -1.52
SEMA4D-216ENST00000474258 FAM236CP0DP71 79 aa5.58□□□□□ -1.52
SEMA4D-216ENST00000474258 Q5W150 140 aa5.58□□□□□ -1.52
SEMA4D-216ENST00000474258 H3BPC8 53 aa5.57□□□□□ -1.52
SEMA4D-216ENST00000474258 TRAV22A0A0B4J277 110 aa5.56□□□□□ -1.52
SEMA4D-216ENST00000474258 MP68P56378 58 aa5.56□□□□□ -1.52
SEMA4D-216ENST00000474258 RBM12B-AS1Q9P1G2 102 aa5.56□□□□□ -1.52
SEMA4D-216ENST00000474258 H0Y9P7 68 aa5.55□□□□□ -1.52
SEMA4D-216ENST00000474258 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
SEMA4D-216ENST00000474258 ZCCHC13Q8WW36 166 aaKnown RBP5.55□□□□□ -1.52
SEMA4D-216ENST00000474258 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
SEMA4D-216ENST00000474258 C20orf197Q8N268 126 aa5.53□□□□□ -1.52
SEMA4D-216ENST00000474258 MPLKIPQ8TAP9 179 aa5.53□□□□□ -1.52
SEMA4D-216ENST00000474258 HRES1P13985 223 aa5.52□□□□□ -1.53
SEMA4D-216ENST00000474258 MT2AP02795 61 aa5.51□□□□□ -1.53
SEMA4D-216ENST00000474258 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
SEMA4D-216ENST00000474258 LINC00208Q96KT6 92 aa5.51□□□□□ -1.53
SEMA4D-216ENST00000474258 LOC101927531A0A1B0GV80 90 aa5.5□□□□□ -1.53
SEMA4D-216ENST00000474258 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
SEMA4D-216ENST00000474258 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
SEMA4D-216ENST00000474258 CYP4F30PQ9H0H9 118 aa5.48□□□□□ -1.53
SEMA4D-216ENST00000474258 SNURFQ9Y675 71 aa5.48□□□□□ -1.53
SEMA4D-216ENST00000474258 NDUFC1O43677 76 aa5.47□□□□□ -1.53
SEMA4D-216ENST00000474258 CYSTM1Q9H1C7 97 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms