RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 ATP11AUNQ6ZP68 121 aa12.85□□□□□ -0.35
RNF220-209ENST00000474064 DNAH11Q96DT5 4516 aa12.84□□□□□ -0.35
RNF220-209ENST00000474064 Q75L30 129 aa12.84□□□□□ -0.35
RNF220-209ENST00000474064 SPRR1BP22528 89 aa12.83□□□□□ -0.35
RNF220-209ENST00000474064 COA5Q86WW8 74 aa12.83□□□□□ -0.35
RNF220-209ENST00000474064 IGLV8-61A0A075B6I0 122 aa12.83□□□□□ -0.36
RNF220-209ENST00000474064 LOC101927531A0A1B0GV80 90 aa12.8□□□□□ -0.36
RNF220-209ENST00000474064 IGLV9-49A0A0B4J1Y8 123 aa12.78□□□□□ -0.36
RNF220-209ENST00000474064 A6NN06 94 aa12.77□□□□□ -0.37
RNF220-209ENST00000474064 A8MWP4 228 aa12.76□□□□□ -0.37
RNF220-209ENST00000474064 FAT2Q9NYQ8 4349 aa12.76□□□□□ -0.37
RNF220-209ENST00000474064 IGLV7-46A0A075B6I9 117 aa12.75□□□□□ -0.37
RNF220-209ENST00000474064 ANAPC11Q9NYG5 84 aa12.75□□□□□ -0.37
RNF220-209ENST00000474064 CIRBP-AS1Q8TBR5 109 aa12.73□□□□□ -0.37
RNF220-209ENST00000474064 CDC42SE1Q9NRR8 79 aa12.73□□□□□ -0.37
RNF220-209ENST00000474064 NDUFS5O43920 106 aa12.72□□□□□ -0.37
RNF220-209ENST00000474064 ZNF861PO60384 105 aa12.72□□□□□ -0.37
RNF220-209ENST00000474064 PCOTHQ58A44 107 aa12.72□□□□□ -0.37
RNF220-209ENST00000474064 PKD1P98161 4303 aa12.72□□□□□ -0.37
RNF220-209ENST00000474064 LINC00472Q9H8W2 130 aa12.72□□□□□ -0.37
RNF220-209ENST00000474064 SPAG11AQ6PDA7 123 aa12.71□□□□□ -0.37
RNF220-209ENST00000474064 KRTAP10-1P60331 282 aa12.68□□□□□ -0.38
RNF220-209ENST00000474064 ZNF706Q9Y5V0 76 aaPredicted RBP12.67□□□□□ -0.38
RNF220-209ENST00000474064 LINC00483Q53H64 154 aa12.66□□□□□ -0.38
RNF220-209ENST00000474064 SACSQ9NZJ4 4579 aa12.65□□□□□ -0.38
RNF220-209ENST00000474064 MMP24-AS1A0A0U1RRL7 71 aa12.65□□□□□ -0.38
RNF220-209ENST00000474064 IGLV7-43P04211 117 aa12.65□□□□□ -0.38
RNF220-209ENST00000474064 MOBPQ13875 183 aa12.64□□□□□ -0.39
RNF220-209ENST00000474064 LINC01558Q9Y6Z2 57 aa12.63□□□□□ -0.39
RNF220-209ENST00000474064 LRP1BQ9NZR2 4599 aa12.61□□□□□ -0.39
RNF220-209ENST00000474064 C7orf65Q6ZTY9 151 aa12.61□□□□□ -0.39
RNF220-209ENST00000474064 SPINK7P58062 85 aa12.59□□□□□ -0.39
RNF220-209ENST00000474064 Q6ZSA8 131 aa12.57□□□□□ -0.4
RNF220-209ENST00000474064 PKHD1P08F94 4074 aa12.53□□□□□ -0.4
RNF220-209ENST00000474064 HRES1P13985 223 aa12.52□□□□□ -0.41
RNF220-209ENST00000474064 TP53AIP1Q9HCN2 124 aa12.5□□□□□ -0.41
RNF220-209ENST00000474064 ASB16-AS1Q495Z4 193 aa12.46□□□□□ -0.41
RNF220-209ENST00000474064 VPS13BQ7Z7G8 4022 aa12.45□□□□□ -0.42
RNF220-209ENST00000474064 Q96NJ1 140 aa12.44□□□□□ -0.42
RNF220-209ENST00000474064 C8orf17Q9NRJ1 99 aa12.42□□□□□ -0.42
RNF220-209ENST00000474064 IGHV6-1A0A0B4J1U7 121 aa12.39□□□□□ -0.43
RNF220-209ENST00000474064 PRR26Q8N8Z3 221 aa12.39□□□□□ -0.43
RNF220-209ENST00000474064 A0A087X002 238 aa12.38□□□□□ -0.43
RNF220-209ENST00000474064 LINC00313P59037 77 aa12.35□□□□□ -0.43
RNF220-209ENST00000474064 DYNC1H1Q14204 4646 aaKnown RBP12.35□□□□□ -0.43
RNF220-209ENST00000474064 KMT2CQ8NEZ4 4911 aaKnown RBP12.34□□□□□ -0.43
RNF220-209ENST00000474064 PRAC1Q96KF2 57 aa12.34□□□□□ -0.43
RNF220-209ENST00000474064 RYR2Q92736 4967 aa12.33□□□□□ -0.44
RNF220-209ENST00000474064 SPINK6Q6UWN8 80 aa12.32□□□□□ -0.44
RNF220-209ENST00000474064 C8orf87E5RJ46 101 aa12.31□□□□□ -0.44
RNF220-209ENST00000474064 KRTAP13-2Q52LG2 175 aa12.31□□□□□ -0.44
RNF220-209ENST00000474064 A0A1B0GVX0 72 aa12.31□□□□□ -0.44
RNF220-209ENST00000474064 MRPL34Q9BQ48 92 aaKnown RBP12.31□□□□□ -0.44
RNF220-209ENST00000474064 SSBP3-AS1Q7Z2R9 100 aa12.3□□□□□ -0.44
RNF220-209ENST00000474064 NOTCH2NLQ7Z3S9 236 aa12.29□□□□□ -0.44
RNF220-209ENST00000474064 CDK2AP2O75956 126 aa12.28□□□□□ -0.44
RNF220-209ENST00000474064 SMR3BP02814 79 aaPredicted RBP12.28□□□□□ -0.44
RNF220-209ENST00000474064 ADM2Q7Z4H4 148 aa12.26□□□□□ -0.45
RNF220-209ENST00000474064 KRTAP1-4P0C5Y4 121 aa12.25□□□□□ -0.45
RNF220-209ENST00000474064 A0A1B0GVY2 172 aa12.24□□□□□ -0.45
RNF220-209ENST00000474064 PLA2G1BP04054 148 aaKnown RBP12.21□□□□□ -0.45
RNF220-209ENST00000474064 Q5W150 140 aa12.21□□□□□ -0.46
RNF220-209ENST00000474064 FAT1Q14517 4588 aa12.18□□□□□ -0.46
RNF220-209ENST00000474064 APOBP04114 4563 aaKnown RBP12.17□□□□□ -0.46
RNF220-209ENST00000474064 ACYP2P14621 99 aa12.16□□□□□ -0.46
RNF220-209ENST00000474064 C4orf48Q5BLP8 95 aa12.15□□□□□ -0.47
RNF220-209ENST00000474064 TYMSOSQ8TAI1 123 aa12.11□□□□□ -0.47
RNF220-209ENST00000474064 KRTAP13-3Q3SY46 172 aa12.1□□□□□ -0.47
RNF220-209ENST00000474064 LINC01554Q52M75 96 aa12.1□□□□□ -0.47
RNF220-209ENST00000474064 A0A1B0GU69 56 aa12.08□□□□□ -0.48
RNF220-209ENST00000474064 SPATA8Q6RVD6 105 aa12.03□□□□□ -0.48
RNF220-209ENST00000474064 DMAC1Q96GE9 116 aa12.03□□□□□ -0.48
RNF220-209ENST00000474064 RYR3Q15413 4870 aa12.01□□□□□ -0.49
RNF220-209ENST00000474064 KRTAP10-4P60372 401 aaPredicted RBP11.97□□□□□ -0.49
RNF220-209ENST00000474064 MIR22HGQ0VDD5 57 aa11.97□□□□□ -0.49
RNF220-209ENST00000474064 SPINK1P00995 79 aa11.94□□□□□ -0.5
RNF220-209ENST00000474064 UQCR11O14957 56 aa11.94□□□□□ -0.5
RNF220-209ENST00000474064 LINC00304Q8N9R0 145 aa11.94□□□□□ -0.5
RNF220-209ENST00000474064 RETNLBQ9BQ08 111 aa11.93□□□□□ -0.5
RNF220-209ENST00000474064 H3BS24 57 aa11.87□□□□□ -0.51
RNF220-209ENST00000474064 CSAG1Q6PB30 78 aa11.87□□□□□ -0.51
RNF220-209ENST00000474064 FAM229AH3BQW9 127 aa11.81□□□□□ -0.52
RNF220-209ENST00000474064 IGKV2-30P06310 120 aa11.8□□□□□ -0.52
RNF220-209ENST00000474064 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
RNF220-209ENST00000474064 KRTAP16-1A8MUX0 517 aa11.79□□□□□ -0.52
RNF220-209ENST00000474064 HSPG2P98160 4391 aa11.79□□□□□ -0.52
RNF220-209ENST00000474064 RPS29P62273 56 aaKnown RBP11.74□□□□□ -0.53
RNF220-209ENST00000474064 LRP1Q07954 4544 aaKnown RBP11.72□□□□□ -0.53
RNF220-209ENST00000474064 Q5VSD8 79 aa11.72□□□□□ -0.53
RNF220-209ENST00000474064 RYR1P21817 5038 aa11.7□□□□□ -0.54
RNF220-209ENST00000474064 IGKV2D-30A0A075B6S6 120 aa11.68□□□□□ -0.54
RNF220-209ENST00000474064 C9orf92A6NGG3 77 aa11.65□□□□□ -0.55
RNF220-209ENST00000474064 KIAA1109Q2LD37 5005 aa11.64□□□□□ -0.55
RNF220-209ENST00000474064 KRTAP17-1Q9BYP8 105 aa11.62□□□□□ -0.55
RNF220-209ENST00000474064 Q8N1X5 172 aa11.59□□□□□ -0.55
RNF220-209ENST00000474064 TNXBP22105 4242 aa11.58□□□□□ -0.56
RNF220-209ENST00000474064 EPPK1P58107 5090 aaKnown RBP11.58□□□□□ -0.56
RNF220-209ENST00000474064 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
RNF220-209ENST00000474064 KRTAP10-8P60410 259 aa11.5□□□□□ -0.57
RNF220-209ENST00000474064 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms