RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 PHF5AQ7RTV0 110 aaKnown RBP4.22□□□□□ -1.73
CKS1B-205ENST00000473344 PRR26Q8N8Z3 221 aa4.22□□□□□ -1.73
CKS1B-205ENST00000473344 PRR4Q16378 134 aa4.21□□□□□ -1.74
CKS1B-205ENST00000473344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.21□□□□□ -1.74
CKS1B-205ENST00000473344 Q8IZM0 81 aa4.21□□□□□ -1.74
CKS1B-205ENST00000473344 H0Y9J4 135 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 IGLV7-43P04211 117 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 UBE2AP49459 152 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 SPAG11BQ08648 103 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 MPLKIPQ8TAP9 179 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 TOMM7Q9P0U1 55 aa4.2□□□□□ -1.74
CKS1B-205ENST00000473344 IGLV1-50A0A075B6I6 118 aa4.19□□□□□ -1.74
CKS1B-205ENST00000473344 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
CKS1B-205ENST00000473344 CYP4F30PQ9H0H9 118 aa4.19□□□□□ -1.74
CKS1B-205ENST00000473344 hDV103S1A0JD37 113 aa4.18□□□□□ -1.74
CKS1B-205ENST00000473344 VPREB1P12018 145 aa4.18□□□□□ -1.74
CKS1B-205ENST00000473344 COX7BP24311 80 aa4.18□□□□□ -1.74
CKS1B-205ENST00000473344 ELOF1P60002 83 aaKnown RBP4.18□□□□□ -1.74
CKS1B-205ENST00000473344 C9orf129Q5T035 196 aaKnown RBP4.18□□□□□ -1.74
CKS1B-205ENST00000473344 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
CKS1B-205ENST00000473344 IGHV3OR16-9A0A0B4J2B5 98 aa4.17□□□□□ -1.74
CKS1B-205ENST00000473344 FAT4Q6V0I7 4981 aa4.16□□□□□ -1.74
CKS1B-205ENST00000473344 FAM168BA1KXE4 195 aa4.16□□□□□ -1.74
CKS1B-205ENST00000473344 ATP11AUNQ6ZP68 121 aa4.16□□□□□ -1.74
CKS1B-205ENST00000473344 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
CKS1B-205ENST00000473344 H3BPC8 53 aa4.15□□□□□ -1.75
CKS1B-205ENST00000473344 TLX1NBP0CAT3 122 aa4.15□□□□□ -1.75
CKS1B-205ENST00000473344 C6orf99Q4VX62 202 aa4.15□□□□□ -1.75
CKS1B-205ENST00000473344 KRTAP1-4P0C5Y4 121 aa4.14□□□□□ -1.75
CKS1B-205ENST00000473344 UNQ6190/PRO20217Q6UXQ8 127 aa4.14□□□□□ -1.75
CKS1B-205ENST00000473344 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
CKS1B-205ENST00000473344 C10orf25Q5T742 122 aa4.13□□□□□ -1.75
CKS1B-205ENST00000473344 C6orf48Q9UBA6 75 aa4.13□□□□□ -1.75
CKS1B-205ENST00000473344 ETDCA0A1B0GVM5 59 aa4.12□□□□□ -1.75
CKS1B-205ENST00000473344 ZNF861PO60384 105 aa4.12□□□□□ -1.75
CKS1B-205ENST00000473344 MP68P56378 58 aa4.12□□□□□ -1.75
CKS1B-205ENST00000473344 SPANXA2-OT1Q8N9U9 137 aa4.12□□□□□ -1.75
CKS1B-205ENST00000473344 TRAV22A0A0B4J277 110 aa4.11□□□□□ -1.75
CKS1B-205ENST00000473344 IGKV4-1P06312 121 aa4.11□□□□□ -1.75
CKS1B-205ENST00000473344 Q6ZQY7 126 aa4.11□□□□□ -1.75
CKS1B-205ENST00000473344 C1orf64Q8NEQ6 169 aa4.11□□□□□ -1.75
CKS1B-205ENST00000473344 IGLV6-57P01721 117 aa4.1□□□□□ -1.75
CKS1B-205ENST00000473344 FAM229BQ4G0N7 80 aa4.1□□□□□ -1.75
CKS1B-205ENST00000473344 KRTAP7-1Q8IUC3 87 aa4.1□□□□□ -1.75
CKS1B-205ENST00000473344 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
CKS1B-205ENST00000473344 Q9BRP9 147 aa4.1□□□□□ -1.75
CKS1B-205ENST00000473344 HCG22E2RYF7 251 aa4.09□□□□□ -1.75
CKS1B-205ENST00000473344 KIAA0087Q14695 138 aa4.09□□□□□ -1.75
CKS1B-205ENST00000473344 HIGD2AQ9BW72 106 aa4.09□□□□□ -1.75
CKS1B-205ENST00000473344 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
CKS1B-205ENST00000473344 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
CKS1B-205ENST00000473344 RBM12B-AS1Q9P1G2 102 aa4.08□□□□□ -1.76
CKS1B-205ENST00000473344 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
CKS1B-205ENST00000473344 A0A087X002 238 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 CHKB-CPT1BH3BT56 60 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 M0R378 163 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 LCA10Q71F78 164 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 ZCCHC13Q8WW36 166 aaKnown RBP4.07□□□□□ -1.76
CKS1B-205ENST00000473344 XAGE1AQ9HD64 81 aa4.07□□□□□ -1.76
CKS1B-205ENST00000473344 ZNF73O43830 326 aaPredicted RBP4.06□□□□□ -1.76
CKS1B-205ENST00000473344 Q75L30 129 aa4.06□□□□□ -1.76
CKS1B-205ENST00000473344 RETNLBQ9BQ08 111 aa4.06□□□□□ -1.76
CKS1B-205ENST00000473344 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
CKS1B-205ENST00000473344 PSPHP1O15172 72 aa4.05□□□□□ -1.76
CKS1B-205ENST00000473344 LINC00208Q96KT6 92 aa4.05□□□□□ -1.76
CKS1B-205ENST00000473344 CDC42SE1Q9NRR8 79 aa4.05□□□□□ -1.76
CKS1B-205ENST00000473344 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
CKS1B-205ENST00000473344 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
CKS1B-205ENST00000473344 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
CKS1B-205ENST00000473344 ANAPC11Q9NYG5 84 aa4.04□□□□□ -1.76
CKS1B-205ENST00000473344 DHRS4-AS1Q9P1J3 65 aa4.04□□□□□ -1.76
CKS1B-205ENST00000473344 IGLV5-48A0A075B6I7 105 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 IGLV7-46A0A075B6I9 117 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 A6NED7 52 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 A8MUN3 132 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 TPRXLQ17RH7 258 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 Q5VV11 94 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 NKAPP1Q8N9T2 125 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 KCNQ1DNQ9H478 68 aa4.03□□□□□ -1.76
CKS1B-205ENST00000473344 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
CKS1B-205ENST00000473344 Q8N9P0 234 aaPredicted RBP4.01□□□□□ -1.77
CKS1B-205ENST00000473344 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
CKS1B-205ENST00000473344 PRR15LQ9BU68 103 aa4.01□□□□□ -1.77
CKS1B-205ENST00000473344 A6NN06 94 aa4□□□□□ -1.77
CKS1B-205ENST00000473344 CASC2Q6XLA1 102 aa4□□□□□ -1.77
CKS1B-205ENST00000473344 SPRR4Q96PI1 79 aa4□□□□□ -1.77
CKS1B-205ENST00000473344 Q8NBF4 154 aa3.99□□□□□ -1.77
CKS1B-205ENST00000473344 PRLHP81277 87 aa3.98□□□□□ -1.77
CKS1B-205ENST00000473344 SPAG11AQ6PDA7 123 aa3.98□□□□□ -1.77
CKS1B-205ENST00000473344 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
CKS1B-205ENST00000473344 IGLV5-37A0A075B6J1 123 aa3.97□□□□□ -1.77
CKS1B-205ENST00000473344 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
CKS1B-205ENST00000473344 Q8N9L7 120 aa3.96□□□□□ -1.78
CKS1B-205ENST00000473344 TP53AIP1Q9HCN2 124 aa3.95□□□□□ -1.78
CKS1B-205ENST00000473344 C8orf87E5RJ46 101 aa3.94□□□□□ -1.78
CKS1B-205ENST00000473344 H0Y9P7 68 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms