RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 WFDC13Q8IUB5 93 aa6.38□□□□□ -1.39
APTX-216ENST00000472896 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
APTX-216ENST00000472896 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
APTX-216ENST00000472896 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
APTX-216ENST00000472896 IGLV7-46A0A075B6I9 117 aa6.37□□□□□ -1.39
APTX-216ENST00000472896 SPART-AS1P0CW21 52 aa6.37□□□□□ -1.39
APTX-216ENST00000472896 COA5Q86WW8 74 aa6.37□□□□□ -1.39
APTX-216ENST00000472896 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
APTX-216ENST00000472896 UBE2DNLQ8IWF7 75 aa6.36□□□□□ -1.39
APTX-216ENST00000472896 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
APTX-216ENST00000472896 IGLV8-61A0A075B6I0 122 aa6.35□□□□□ -1.39
APTX-216ENST00000472896 CASC2Q6XLA1 102 aa6.35□□□□□ -1.39
APTX-216ENST00000472896 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
APTX-216ENST00000472896 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
APTX-216ENST00000472896 H3BNG1 76 aa6.34□□□□□ -1.4
APTX-216ENST00000472896 MOBPQ13875 183 aa6.33□□□□□ -1.4
APTX-216ENST00000472896 RPL37AP8A6NKH3 93 aa6.32□□□□□ -1.4
APTX-216ENST00000472896 HTN3P15516 51 aa6.32□□□□□ -1.4
APTX-216ENST00000472896 IGFL1Q6UW32 110 aa6.32□□□□□ -1.4
APTX-216ENST00000472896 DMBT1Q9UGM3 2413 aaPredicted RBP6.31□□□□□ -1.4
APTX-216ENST00000472896 APOBP04114 4563 aaKnown RBP6.31□□□□□ -1.4
APTX-216ENST00000472896 DEFB116Q30KQ4 102 aa6.31□□□□□ -1.4
APTX-216ENST00000472896 A8MWP4 228 aa6.3□□□□□ -1.4
APTX-216ENST00000472896 KRTAP10-2P60368 255 aa6.3□□□□□ -1.4
APTX-216ENST00000472896 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
APTX-216ENST00000472896 A0A087WSZ3 146 aa6.29□□□□□ -1.4
APTX-216ENST00000472896 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
APTX-216ENST00000472896 ASB16-AS1Q495Z4 193 aa6.28□□□□□ -1.4
APTX-216ENST00000472896 TP53AIP1Q9HCN2 124 aa6.28□□□□□ -1.4
APTX-216ENST00000472896 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.27□□□□□ -1.41
APTX-216ENST00000472896 C8orf87E5RJ46 101 aa6.27□□□□□ -1.41
APTX-216ENST00000472896 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
APTX-216ENST00000472896 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
APTX-216ENST00000472896 A0A087X002 238 aa6.26□□□□□ -1.41
APTX-216ENST00000472896 RPL37AP61513 92 aaKnown RBP6.26□□□□□ -1.41
APTX-216ENST00000472896 LINC01556Q5JQF7 62 aa6.26□□□□□ -1.41
APTX-216ENST00000472896 FLG2Q5D862 2391 aaPredicted RBP6.25□□□□□ -1.41
APTX-216ENST00000472896 LINC00472Q9H8W2 130 aa6.24□□□□□ -1.41
APTX-216ENST00000472896 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
APTX-216ENST00000472896 SPAG11AQ6PDA7 123 aa6.23□□□□□ -1.41
APTX-216ENST00000472896 KRTAP1-5Q9BYS1 174 aa6.23□□□□□ -1.41
APTX-216ENST00000472896 KRTAP9-6A0A140TA67 174 aa6.23□□□□□ -1.41
APTX-216ENST00000472896 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
APTX-216ENST00000472896 FAM168BA1KXE4 195 aa6.22□□□□□ -1.41
APTX-216ENST00000472896 Q5VSD8 79 aa6.22□□□□□ -1.41
APTX-216ENST00000472896 FAM229AH3BQW9 127 aa6.21□□□□□ -1.41
APTX-216ENST00000472896 SPINK7P58062 85 aa6.21□□□□□ -1.41
APTX-216ENST00000472896 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.41
APTX-216ENST00000472896 SPRR1BP22528 89 aa6.21□□□□□ -1.42
APTX-216ENST00000472896 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
APTX-216ENST00000472896 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
APTX-216ENST00000472896 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
APTX-216ENST00000472896 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
APTX-216ENST00000472896 A0A1W2PNN7 141 aa6.18□□□□□ -1.42
APTX-216ENST00000472896 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
APTX-216ENST00000472896 LINC00313P59037 77 aa6.18□□□□□ -1.42
APTX-216ENST00000472896 HRES1P13985 223 aa6.18□□□□□ -1.42
APTX-216ENST00000472896 PCOTHQ58A44 107 aa6.18□□□□□ -1.42
APTX-216ENST00000472896 FAT1Q14517 4588 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 MYCBP2O75592 4640 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 KRTAP10-1P60331 282 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 UBR4Q5T4S7 5183 aa6.17□□□□□ -1.42
APTX-216ENST00000472896 H0Y9J4 135 aa6.16□□□□□ -1.42
APTX-216ENST00000472896 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
APTX-216ENST00000472896 Q6ZRN7 208 aaPredicted RBP6.16□□□□□ -1.42
APTX-216ENST00000472896 LINC01554Q52M75 96 aa6.15□□□□□ -1.43
APTX-216ENST00000472896 PRLHP81277 87 aa6.11□□□□□ -1.43
APTX-216ENST00000472896 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
APTX-216ENST00000472896 A0A087WTM6 91 aa6.08□□□□□ -1.44
APTX-216ENST00000472896 ACYP2P14621 99 aa6.08□□□□□ -1.44
APTX-216ENST00000472896 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
APTX-216ENST00000472896 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
APTX-216ENST00000472896 Q96NJ1 140 aa6.06□□□□□ -1.44
APTX-216ENST00000472896 MRPL34Q9BQ48 92 aaKnown RBP6.06□□□□□ -1.44
APTX-216ENST00000472896 A0A1B0GVX0 72 aa6.05□□□□□ -1.44
APTX-216ENST00000472896 HMCN2Q8NDA2 5059 aa6.04□□□□□ -1.44
APTX-216ENST00000472896 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
APTX-216ENST00000472896 A0A096LNI7 61 aa6.03□□□□□ -1.44
APTX-216ENST00000472896 RETNLBQ9BQ08 111 aa6.03□□□□□ -1.44
APTX-216ENST00000472896 KRTAP4-12Q9BQ66 201 aa6.02□□□□□ -1.45
APTX-216ENST00000472896 A0A1B0GU69 56 aa6.01□□□□□ -1.45
APTX-216ENST00000472896 ADM2Q7Z4H4 148 aa6.01□□□□□ -1.45
APTX-216ENST00000472896 IGLV5-52A0A0A0MRZ9 124 aa5.99□□□□□ -1.45
APTX-216ENST00000472896 IGHV6-1A0A0B4J1U7 121 aa5.99□□□□□ -1.45
APTX-216ENST00000472896 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
APTX-216ENST00000472896 UQCR11O14957 56 aa5.98□□□□□ -1.45
APTX-216ENST00000472896 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
APTX-216ENST00000472896 KRTAP10-4P60372 401 aaPredicted RBP5.97□□□□□ -1.45
APTX-216ENST00000472896 LRP1Q07954 4544 aaKnown RBP5.96□□□□□ -1.45
APTX-216ENST00000472896 KRTAP13-3Q3SY46 172 aa5.96□□□□□ -1.46
APTX-216ENST00000472896 C14orf177Q52M58 125 aa5.95□□□□□ -1.46
APTX-216ENST00000472896 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
APTX-216ENST00000472896 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
APTX-216ENST00000472896 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
APTX-216ENST00000472896 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
APTX-216ENST00000472896 Q6ZSA8 131 aa5.94□□□□□ -1.46
APTX-216ENST00000472896 KRTAP11-1Q8IUC1 163 aa5.93□□□□□ -1.46
APTX-216ENST00000472896 DNAH8Q96JB1 4490 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms