RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 C20orf78Q9BR46 151 aa1□□□□□ -2.25
XRN1-210ENST00000472697 SNURFQ9Y675 71 aa1□□□□□ -2.25
XRN1-210ENST00000472697 LRP1Q07954 4544 aaKnown RBP1□□□□□ -2.25
XRN1-210ENST00000472697 PIGBOS1A0A0B4J2F0 54 aa1□□□□□ -2.25
XRN1-210ENST00000472697 SIX6O95475 246 aa1□□□□□ -2.25
XRN1-210ENST00000472697 KRTAP12-4P60329 112 aa1□□□□□ -2.25
XRN1-210ENST00000472697 HAMPP81172 84 aa1□□□□□ -2.25
XRN1-210ENST00000472697 MUC5ACP98088 5654 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 IGKV2-40A0A087WW87 121 aaPredicted RBP0.99□□□□□ -2.25
XRN1-210ENST00000472697 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 SPINK4O60575 86 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 IGKV2D-40P01614 121 aaPredicted RBP0.99□□□□□ -2.25
XRN1-210ENST00000472697 PYY3Q5JQD4 70 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 UNQ6190/PRO20217Q6UXQ8 127 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 COPS9Q8WXC6 57 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 PMCHL2Q9BQD1 86 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 NOP10Q9NPE3 64 aaKnown RBP0.99□□□□□ -2.25
XRN1-210ENST00000472697 TRAV22A0A0B4J277 110 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 TRBV10-3A0A0K0K1G6 114 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 CHKB-CPT1BH3BT56 60 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 PPP1R17O96001 155 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 WT1-ASQ06250 92 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 LINC00299Q6ZSB3 139 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 WFDC10BQ8IUB3 73 aa0.99□□□□□ -2.25
XRN1-210ENST00000472697 TRAV1-2A0A0B4J238 106 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 APELAP0DMC3 54 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 SEC11AP67812 179 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 XAF1Q6GPH4 301 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 Q6ZQY7 126 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 TRGV1A0A0A0MS02 117 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 IGLC1P0CG04 106 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 VAMP8Q9BV40 100 aa0.98□□□□□ -2.25
XRN1-210ENST00000472697 A0A0G2JND7 137 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 NCR3O14931 201 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 PLAC4Q8WY50 150 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 FAUP35544 74 aaKnown RBP0.97□□□□□ -2.25
XRN1-210ENST00000472697 SPINK13Q1W4C9 94 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 C6orf201Q7Z4U5 140 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 TRGV9Q99603 122 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 Q9H521 79 aa0.97□□□□□ -2.25
XRN1-210ENST00000472697 TRBV7-3A0A075B6L6 115 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 TTTY10Q9BZA0 68 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 AP4S1Q9Y587 144 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 WFDC2Q14508 124 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 LENEPQ9Y5L5 61 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
XRN1-210ENST00000472697 PDCD5O14737 125 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 SSBP1Q04837 148 aaKnown RBP0.95□□□□□ -2.26
XRN1-210ENST00000472697 NMSQ5H8A3 153 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 SPAG11AQ6PDA7 123 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 PPP1R1CQ8WVI7 109 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 ARHGAP5-AS1Q96IT6 56 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 HIGD1BQ9P298 99 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 TRBV30A0A0K0K1B3 111 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 SNRPGP15A8MWD9 76 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 APOC3P02656 99 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
XRN1-210ENST00000472697 MT1HP80294 61 aa0.94□□□□□ -2.26
XRN1-210ENST00000472697 AQP10Q96PS8 301 aa0.94□□□□□ -2.26
XRN1-210ENST00000472697 SPAG11BQ08648 103 aa0.94□□□□□ -2.26
XRN1-210ENST00000472697 ARL2-SNX15V9GYD0 113 aa0.94□□□□□ -2.26
XRN1-210ENST00000472697 GVQW2A0A096LPI5 108 aaPredicted RBP0.93□□□□□ -2.26
XRN1-210ENST00000472697 RPS29P62273 56 aaKnown RBP0.93□□□□□ -2.26
XRN1-210ENST00000472697 H3BQ15 152 aa0.93□□□□□ -2.26
XRN1-210ENST00000472697 V9GYH0 126 aa0.93□□□□□ -2.26
XRN1-210ENST00000472697 V9GYV3 84 aa0.93□□□□□ -2.26
XRN1-210ENST00000472697 SSSCA1O60232 199 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 HTN1P15515 57 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 ZNF818PQ6ZRF7 136 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 H7BZZ5 65 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 CDC42SE2Q9NRR3 84 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 SCP2D1Q9UJQ7 156 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 M0R2T5 61 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 DEFB107AQ8IZN7 70 aa0.92□□□□□ -2.26
XRN1-210ENST00000472697 TRAV21A0A0B4J279 112 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 CEBPZOSA8MTT3 80 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 CFAP126Q5VTH2 177 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 ENHOQ6UWT2 76 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 FXYD6Q9H0Q3 95 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 ANGP03950 147 aaKnown RBP0.91□□□□□ -2.26
XRN1-210ENST00000472697 IGLC2P0DOY2 106 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 DEFB1P60022 68 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 KRTAP19-2Q3LHN2 52 aa0.91□□□□□ -2.26
XRN1-210ENST00000472697 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
XRN1-210ENST00000472697 TRBV25-1A0A075B6N4 114 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 A0A096LNI7 61 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 ACYP2P14621 99 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 UBE2D3P61077 147 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 UBE2D2P62837 147 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 COX6A2Q02221 97 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 MED9Q9NWA0 146 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 SFTA3P0C7M3 94 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 COX6B2Q6YFQ2 88 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 CYP4F30PQ9H0H9 118 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 LINC00472Q9H8W2 130 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.27
XRN1-210ENST00000472697 LPAP08519 4548 aa0.89□□□□□ -2.27
XRN1-210ENST00000472697 A0A087WVE0 104 aa0.89□□□□□ -2.27
XRN1-210ENST00000472697 CTXND1A0A1B0GTU2 59 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms