RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 TSTD3H0UI37 97 aa8.02□□□□□ -1.13
CALD1-215ENST00000472096 LOC105371267A0A1B0GV96 52 aa8.01□□□□□ -1.13
CALD1-215ENST00000472096 NAA38Q9BRA0 125 aaKnown RBP8.01□□□□□ -1.13
CALD1-215ENST00000472096 CCKP06307 115 aa8□□□□□ -1.13
CALD1-215ENST00000472096 Q75L30 129 aa7.99□□□□□ -1.13
CALD1-215ENST00000472096 ATXN8Q156A1 80 aa7.98□□□□□ -1.13
CALD1-215ENST00000472096 KRTAP19-2Q3LHN2 52 aa7.98□□□□□ -1.13
CALD1-215ENST00000472096 SIGMAR1Q99720 223 aa7.98□□□□□ -1.13
CALD1-215ENST00000472096 BAALC-AS2P0C853 105 aa7.97□□□□□ -1.13
CALD1-215ENST00000472096 RBM3P98179 157 aaKnown RBP7.97□□□□□ -1.13
CALD1-215ENST00000472096 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
CALD1-215ENST00000472096 KRTAP4-2Q9BYR5 136 aa7.95□□□□□ -1.14
CALD1-215ENST00000472096 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
CALD1-215ENST00000472096 BATFQ16520 125 aa7.94□□□□□ -1.14
CALD1-215ENST00000472096 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
CALD1-215ENST00000472096 LYRM7Q5U5X0 104 aa7.93□□□□□ -1.14
CALD1-215ENST00000472096 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
CALD1-215ENST00000472096 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
CALD1-215ENST00000472096 DSCR10P59022 87 aa7.92□□□□□ -1.14
CALD1-215ENST00000472096 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
CALD1-215ENST00000472096 A8MUU9 505 aa7.91□□□□□ -1.14
CALD1-215ENST00000472096 C9JAW5 83 aa7.9□□□□□ -1.14
CALD1-215ENST00000472096 DEFB116Q30KQ4 102 aa7.9□□□□□ -1.14
CALD1-215ENST00000472096 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
CALD1-215ENST00000472096 JMJD7-PLA2G4BH0Y9G9 81 aa7.87□□□□□ -1.15
CALD1-215ENST00000472096 MT1HP80294 61 aa7.87□□□□□ -1.15
CALD1-215ENST00000472096 KRTAP16-1A8MUX0 517 aa7.86□□□□□ -1.15
CALD1-215ENST00000472096 LINC00313P59037 77 aa7.86□□□□□ -1.15
CALD1-215ENST00000472096 Q6ZQT0 140 aa7.86□□□□□ -1.15
CALD1-215ENST00000472096 LOC110117498A0A087WWA1 95 aa7.85□□□□□ -1.15
CALD1-215ENST00000472096 A0A0A0MQY5 61 aa7.85□□□□□ -1.15
CALD1-215ENST00000472096 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
CALD1-215ENST00000472096 TAX1BP3O14907 124 aa7.84□□□□□ -1.15
CALD1-215ENST00000472096 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
CALD1-215ENST00000472096 COX6B2Q6YFQ2 88 aa7.82□□□□□ -1.16
CALD1-215ENST00000472096 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
CALD1-215ENST00000472096 A0A1B0GVX0 72 aa7.81□□□□□ -1.16
CALD1-215ENST00000472096 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
CALD1-215ENST00000472096 PDE6GP18545 87 aa7.81□□□□□ -1.16
CALD1-215ENST00000472096 A0A1B0GW54 56 aa7.8□□□□□ -1.16
CALD1-215ENST00000472096 J3KT08 172 aa7.8□□□□□ -1.16
CALD1-215ENST00000472096 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
CALD1-215ENST00000472096 C8orf87E5RJ46 101 aa7.79□□□□□ -1.16
CALD1-215ENST00000472096 H3BT86 120 aa7.78□□□□□ -1.16
CALD1-215ENST00000472096 MTURNQ8N3F0 131 aa7.77□□□□□ -1.17
CALD1-215ENST00000472096 A8MWP4 228 aa7.72□□□□□ -1.17
CALD1-215ENST00000472096 NDUFB1O75438 58 aa7.72□□□□□ -1.17
CALD1-215ENST00000472096 MPLKIPQ8TAP9 179 aa7.72□□□□□ -1.17
CALD1-215ENST00000472096 SPCS1Q9Y6A9 102 aa7.71□□□□□ -1.18
CALD1-215ENST00000472096 M0R2T5 61 aa7.7□□□□□ -1.18
CALD1-215ENST00000472096 KRTAP10-6P60371 365 aaPredicted RBP7.7□□□□□ -1.18
CALD1-215ENST00000472096 IGKV3D-7A0A0C4DH55 119 aa7.68□□□□□ -1.18
CALD1-215ENST00000472096 NREPQ16612 68 aa7.68□□□□□ -1.18
CALD1-215ENST00000472096 COL5A1-AS1Q5SY13 56 aa7.68□□□□□ -1.18
CALD1-215ENST00000472096 C8orf17Q9NRJ1 99 aa7.68□□□□□ -1.18
CALD1-215ENST00000472096 Q8N9P0 234 aaPredicted RBP7.65□□□□□ -1.18
CALD1-215ENST00000472096 ZCCHC13Q8WW36 166 aaKnown RBP7.65□□□□□ -1.18
CALD1-215ENST00000472096 PRR15Q8IV56 129 aa7.64□□□□□ -1.19
CALD1-215ENST00000472096 HRES1P13985 223 aa7.63□□□□□ -1.19
CALD1-215ENST00000472096 K7EP34 96 aa7.61□□□□□ -1.19
CALD1-215ENST00000472096 Q6ZVQ6 151 aa7.61□□□□□ -1.19
CALD1-215ENST00000472096 MMP24-AS1A0A0U1RRL7 71 aa7.6□□□□□ -1.19
CALD1-215ENST00000472096 PRO0461Q9UI25 63 aa7.6□□□□□ -1.19
CALD1-215ENST00000472096 K7EQZ3 153 aa7.59□□□□□ -1.19
CALD1-215ENST00000472096 FAM236DA0A1B0GTK5 79 aa7.58□□□□□ -1.2
CALD1-215ENST00000472096 FAM236CP0DP71 79 aa7.58□□□□□ -1.2
CALD1-215ENST00000472096 TMEM254Q8TBM7 123 aa7.57□□□□□ -1.2
CALD1-215ENST00000472096 RBM12B-AS1Q9P1G2 102 aa7.57□□□□□ -1.2
CALD1-215ENST00000472096 BPY2O14599 106 aa7.56□□□□□ -1.2
CALD1-215ENST00000472096 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
CALD1-215ENST00000472096 MRPL34Q9BQ48 92 aaKnown RBP7.55□□□□□ -1.2
CALD1-215ENST00000472096 SPINK7P58062 85 aa7.54□□□□□ -1.2
CALD1-215ENST00000472096 hDV103S1A0JD37 113 aa7.53□□□□□ -1.2
CALD1-215ENST00000472096 IGKV2-30P06310 120 aa7.51□□□□□ -1.21
CALD1-215ENST00000472096 GTF2H5Q6ZYL4 71 aa7.51□□□□□ -1.21
CALD1-215ENST00000472096 Q8N9L7 120 aa7.49□□□□□ -1.21
CALD1-215ENST00000472096 LINC00846Q9NV44 126 aa7.48□□□□□ -1.21
CALD1-215ENST00000472096 NDUFS5O43920 106 aa7.47□□□□□ -1.21
CALD1-215ENST00000472096 WFDC13Q8IUB5 93 aa7.46□□□□□ -1.22
CALD1-215ENST00000472096 UBL5Q9BZL1 73 aa7.46□□□□□ -1.22
CALD1-215ENST00000472096 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
CALD1-215ENST00000472096 F8W1H4 67 aa7.44□□□□□ -1.22
CALD1-215ENST00000472096 CASC2Q6XLA1 102 aa7.44□□□□□ -1.22
CALD1-215ENST00000472096 ETDBQ3ZM63 59 aa7.42□□□□□ -1.22
CALD1-215ENST00000472096 CRCT1Q9UGL9 99 aa7.41□□□□□ -1.22
CALD1-215ENST00000472096 FSIP2Q5CZC0 6907 aa7.4□□□□□ -1.23
CALD1-215ENST00000472096 HCG22E2RYF7 251 aa7.39□□□□□ -1.23
CALD1-215ENST00000472096 Q5W150 140 aa7.38□□□□□ -1.23
CALD1-215ENST00000472096 MT2AP02795 61 aa7.36□□□□□ -1.23
CALD1-215ENST00000472096 IGKV2D-30A0A075B6S6 120 aa7.35□□□□□ -1.23
CALD1-215ENST00000472096 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
CALD1-215ENST00000472096 CXCL6P80162 114 aa7.34□□□□□ -1.23
CALD1-215ENST00000472096 MT1FP04733 61 aa7.31□□□□□ -1.24
CALD1-215ENST00000472096 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
CALD1-215ENST00000472096 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
CALD1-215ENST00000472096 FAM240AA0A1B0GVK7 77 aa7.23□□□□□ -1.25
CALD1-215ENST00000472096 ACYP1P07311 99 aa7.23□□□□□ -1.25
CALD1-215ENST00000472096 TP53AIP1Q9HCN2 124 aa7.22□□□□□ -1.25
CALD1-215ENST00000472096 C4orf26Q17RF5 130 aa7.21□□□□□ -1.26
CALD1-215ENST00000472096 USH2AO75445 5202 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms