RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
SNX13-205ENST00000471744 J3KT08 172 aa8.18□□□□□ -1.1
SNX13-205ENST00000471744 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
SNX13-205ENST00000471744 A0A0U1RQV1 116 aa8.16□□□□□ -1.1
SNX13-205ENST00000471744 PRO0461Q9UI25 63 aa8.16□□□□□ -1.1
SNX13-205ENST00000471744 DEFB116Q30KQ4 102 aa8.15□□□□□ -1.1
SNX13-205ENST00000471744 LINC00313P59037 77 aa8.13□□□□□ -1.11
SNX13-205ENST00000471744 PCOTHQ58A44 107 aa8.13□□□□□ -1.11
SNX13-205ENST00000471744 Q75L30 129 aa8.13□□□□□ -1.11
SNX13-205ENST00000471744 F8W1H4 67 aa8.12□□□□□ -1.11
SNX13-205ENST00000471744 NREPQ16612 68 aa8.12□□□□□ -1.11
SNX13-205ENST00000471744 A0A1B0GVX0 72 aa8.1□□□□□ -1.11
SNX13-205ENST00000471744 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
SNX13-205ENST00000471744 NDUFB1O75438 58 aa8.1□□□□□ -1.11
SNX13-205ENST00000471744 DSCR10P59022 87 aa8.1□□□□□ -1.11
SNX13-205ENST00000471744 KRTAP4-8Q9BYQ9 185 aa8.1□□□□□ -1.11
SNX13-205ENST00000471744 IGHV6-1A0A0B4J1U7 121 aa8.09□□□□□ -1.11
SNX13-205ENST00000471744 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
SNX13-205ENST00000471744 MUC2Q02817 5179 aa8.08□□□□□ -1.12
SNX13-205ENST00000471744 A8MUU9 505 aa8.07□□□□□ -1.12
SNX13-205ENST00000471744 ATP11AUNQ6ZP68 121 aa8.07□□□□□ -1.12
SNX13-205ENST00000471744 A8MWP4 228 aa8.06□□□□□ -1.12
SNX13-205ENST00000471744 KRTAP4-1Q9BYQ7 146 aa8.04□□□□□ -1.12
SNX13-205ENST00000471744 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
SNX13-205ENST00000471744 NOTCH2NLQ7Z3S9 236 aa8.02□□□□□ -1.13
SNX13-205ENST00000471744 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
SNX13-205ENST00000471744 IGKV3D-7A0A0C4DH55 119 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 BPY2O14599 106 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 Q6ZVQ6 151 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 PRR15Q8IV56 129 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 UBL5Q9BZL1 73 aa7.99□□□□□ -1.13
SNX13-205ENST00000471744 C8orf17Q9NRJ1 99 aa7.98□□□□□ -1.13
SNX13-205ENST00000471744 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
SNX13-205ENST00000471744 LINC00846Q9NV44 126 aa7.95□□□□□ -1.14
SNX13-205ENST00000471744 KRTAP9-6A0A140TA67 174 aa7.94□□□□□ -1.14
SNX13-205ENST00000471744 K7EQZ3 153 aa7.92□□□□□ -1.14
SNX13-205ENST00000471744 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
SNX13-205ENST00000471744 A0A1B0GV90 55 aa7.9□□□□□ -1.14
SNX13-205ENST00000471744 TMEM254Q8TBM7 123 aa7.9□□□□□ -1.14
SNX13-205ENST00000471744 KRTAP4-12Q9BQ66 201 aa7.9□□□□□ -1.14
SNX13-205ENST00000471744 MMP24-AS1A0A0U1RRL7 71 aa7.89□□□□□ -1.15
SNX13-205ENST00000471744 KRTAP19-1Q8IUB9 90 aa7.89□□□□□ -1.15
SNX13-205ENST00000471744 hDV103S1A0JD37 113 aa7.88□□□□□ -1.15
SNX13-205ENST00000471744 ACYP1P07311 99 aa7.88□□□□□ -1.15
SNX13-205ENST00000471744 FAT4Q6V0I7 4981 aa7.87□□□□□ -1.15
SNX13-205ENST00000471744 MRPL34Q9BQ48 92 aaKnown RBP7.87□□□□□ -1.15
SNX13-205ENST00000471744 ZCCHC13Q8WW36 166 aaKnown RBP7.86□□□□□ -1.15
SNX13-205ENST00000471744 FAM240AA0A1B0GVK7 77 aa7.85□□□□□ -1.15
SNX13-205ENST00000471744 CXCL6P80162 114 aa7.83□□□□□ -1.16
SNX13-205ENST00000471744 Q8N9L7 120 aa7.83□□□□□ -1.16
SNX13-205ENST00000471744 KRTAP19-2Q3LHN2 52 aa7.82□□□□□ -1.16
SNX13-205ENST00000471744 CASC2Q6XLA1 102 aa7.81□□□□□ -1.16
SNX13-205ENST00000471744 COX6B2Q6YFQ2 88 aa7.81□□□□□ -1.16
SNX13-205ENST00000471744 NDUFS5O43920 106 aa7.79□□□□□ -1.16
SNX13-205ENST00000471744 WFDC13Q8IUB5 93 aa7.79□□□□□ -1.16
SNX13-205ENST00000471744 HCG22E2RYF7 251 aa7.77□□□□□ -1.17
SNX13-205ENST00000471744 ATP5EP2Q5VTU8 51 aa7.76□□□□□ -1.17
SNX13-205ENST00000471744 J3QR89 54 aa7.72□□□□□ -1.17
SNX13-205ENST00000471744 SPINK7P58062 85 aa7.72□□□□□ -1.17
SNX13-205ENST00000471744 RBM12B-AS1Q9P1G2 102 aa7.72□□□□□ -1.17
SNX13-205ENST00000471744 LCE3BQ5TA77 95 aa7.71□□□□□ -1.18
SNX13-205ENST00000471744 HRES1P13985 223 aa7.7□□□□□ -1.18
SNX13-205ENST00000471744 MT1HP80294 61 aa7.7□□□□□ -1.18
SNX13-205ENST00000471744 LINC00643Q86TS7 51 aa7.68□□□□□ -1.18
SNX13-205ENST00000471744 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
SNX13-205ENST00000471744 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
SNX13-205ENST00000471744 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
SNX13-205ENST00000471744 TP53AIP1Q9HCN2 124 aa7.65□□□□□ -1.18
SNX13-205ENST00000471744 Q5W150 140 aa7.64□□□□□ -1.19
SNX13-205ENST00000471744 M0R2T5 61 aa7.63□□□□□ -1.19
SNX13-205ENST00000471744 FLGP20930 4061 aaPredicted RBP7.62□□□□□ -1.19
SNX13-205ENST00000471744 HIST1H4AP62805 103 aaKnown RBP7.62□□□□□ -1.19
SNX13-205ENST00000471744 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
SNX13-205ENST00000471744 KRTAP9-9Q9BYP9 154 aa7.6□□□□□ -1.19
SNX13-205ENST00000471744 KRTAP9-4Q9BYQ2 154 aa7.6□□□□□ -1.19
SNX13-205ENST00000471744 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
SNX13-205ENST00000471744 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
SNX13-205ENST00000471744 K7ERU9 68 aa7.52□□□□□ -1.21
SNX13-205ENST00000471744 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
SNX13-205ENST00000471744 A0A087WVE0 104 aa7.5□□□□□ -1.21
SNX13-205ENST00000471744 TRAV22A0A0B4J277 110 aa7.49□□□□□ -1.21
SNX13-205ENST00000471744 UQCRQO14949 82 aa7.49□□□□□ -1.21
SNX13-205ENST00000471744 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
SNX13-205ENST00000471744 LOC101927531A0A1B0GV80 90 aa7.44□□□□□ -1.22
SNX13-205ENST00000471744 ATOX1O00244 68 aa7.44□□□□□ -1.22
SNX13-205ENST00000471744 H1FX-AS1Q4G0G2 97 aa7.44□□□□□ -1.22
SNX13-205ENST00000471744 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
SNX13-205ENST00000471744 IMUPQ9GZP8 106 aa7.42□□□□□ -1.22
SNX13-205ENST00000471744 H0Y9P7 68 aa7.4□□□□□ -1.22
SNX13-205ENST00000471744 KRTAP19-4Q3LI73 84 aa7.4□□□□□ -1.22
SNX13-205ENST00000471744 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.22
SNX13-205ENST00000471744 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
SNX13-205ENST00000471744 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
SNX13-205ENST00000471744 SCGB1A1P11684 91 aa7.36□□□□□ -1.23
SNX13-205ENST00000471744 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
SNX13-205ENST00000471744 MP68P56378 58 aa7.35□□□□□ -1.23
SNX13-205ENST00000471744 MT-ATP8P03928 68 aa7.34□□□□□ -1.23
SNX13-205ENST00000471744 C1orf64Q8NEQ6 169 aa7.34□□□□□ -1.23
SNX13-205ENST00000471744 C5orf47Q569G3 176 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms