RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 ARHGAP35Q9NRY4 1499 aa-0.98□□□□□ -2.57
COPS3-206ENST00000471414 ABCC1P33527 1531 aa-0.98□□□□□ -2.57
COPS3-206ENST00000471414 H3BUT2 72 aa-0.98□□□□□ -2.57
COPS3-206ENST00000471414 NRAPQ86VF7 1730 aa-0.98□□□□□ -2.57
COPS3-206ENST00000471414 ACACBO00763 2458 aa-0.98□□□□□ -2.57
COPS3-206ENST00000471414 RALGAPBQ86X10 1494 aa-0.99□□□□□ -2.57
COPS3-206ENST00000471414 UTP20O75691 2785 aaKnown RBP-0.99□□□□□ -2.57
COPS3-206ENST00000471414 DNAH2Q9P225 4427 aa-0.99□□□□□ -2.57
COPS3-206ENST00000471414 KCNQ1DNQ9H478 68 aa-0.99□□□□□ -2.57
COPS3-206ENST00000471414 CCDC168Q8NDH2 2452 aa-0.99□□□□□ -2.57
COPS3-206ENST00000471414 CFAP74Q9C0B2 1584 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 MT1HP80294 61 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 UBL5Q9BZL1 73 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 ERVK-7P63135 1459 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 CD163L1Q9NR16 1453 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 A0A0C4DFX4 3053 aa-1□□□□□ -2.57
COPS3-206ENST00000471414 INO80Q9ULG1 1556 aaPredicted RBP-1□□□□□ -2.57
COPS3-206ENST00000471414 TOGARAM1Q9Y4F4 1720 aa-1.01□□□□□ -2.57
COPS3-206ENST00000471414 TRIOO75962 3097 aa-1.01□□□□□ -2.57
COPS3-206ENST00000471414 BVES-AS1Q5T3Y7 98 aa-1.01□□□□□ -2.57
COPS3-206ENST00000471414 NHSQ6T4R5 1651 aa-1.01□□□□□ -2.57
COPS3-206ENST00000471414 WDR87Q6ZQQ6 2873 aa-1.02□□□□□ -2.57
COPS3-206ENST00000471414 ABCA13Q86UQ4 5058 aa-1.02□□□□□ -2.57
COPS3-206ENST00000471414 CRIP1P50238 77 aa-1.02□□□□□ -2.57
COPS3-206ENST00000471414 KIF1AQ12756 1690 aa-1.02□□□□□ -2.57
COPS3-206ENST00000471414 LRRIQ1Q96JM4 1722 aa-1.03□□□□□ -2.57
COPS3-206ENST00000471414 CCDC18Q5T9S5 1454 aa-1.03□□□□□ -2.57
COPS3-206ENST00000471414 WT1-ASQ06250 92 aa-1.03□□□□□ -2.57
COPS3-206ENST00000471414 DNAH8Q96JB1 4490 aa-1.04□□□□□ -2.58
COPS3-206ENST00000471414 KRTAP19-5Q3LI72 72 aa-1.04□□□□□ -2.58
COPS3-206ENST00000471414 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.04□□□□□ -2.58
COPS3-206ENST00000471414 LMTK2Q8IWU2 1503 aa-1.05□□□□□ -2.58
COPS3-206ENST00000471414 RANBP2P49792 3224 aaKnown RBP-1.05□□□□□ -2.58
COPS3-206ENST00000471414 SMARCA2P51531 1590 aa-1.05□□□□□ -2.58
COPS3-206ENST00000471414 BIRC6Q9NR09 4857 aa-1.05□□□□□ -2.58
COPS3-206ENST00000471414 LAMA2P24043 3122 aaKnown RBP-1.06□□□□□ -2.58
COPS3-206ENST00000471414 DEFB1P60022 68 aa-1.06□□□□□ -2.58
COPS3-206ENST00000471414 ENHOQ6UWT2 76 aa-1.06□□□□□ -2.58
COPS3-206ENST00000471414 PLECQ15149 4684 aaKnown RBP-1.07□□□□□ -2.58
COPS3-206ENST00000471414 RPS27P42677 84 aaKnown RBP-1.07□□□□□ -2.58
COPS3-206ENST00000471414 RPS27LQ71UM5 84 aaKnown RBP-1.07□□□□□ -2.58
COPS3-206ENST00000471414 C18orf32Q8TCD1 76 aa-1.07□□□□□ -2.58
COPS3-206ENST00000471414 ANKARQ7Z5J8 1434 aa-1.07□□□□□ -2.58
COPS3-206ENST00000471414 BPTFQ12830 3046 aa-1.08□□□□□ -2.58
COPS3-206ENST00000471414 ETDCA0A1B0GVM5 59 aa-1.08□□□□□ -2.58
COPS3-206ENST00000471414 MINOS1Q5TGZ0 78 aa-1.08□□□□□ -2.58
COPS3-206ENST00000471414 ABCA8O94911 1581 aa-1.08□□□□□ -2.58
COPS3-206ENST00000471414 RELNP78509 3460 aa-1.09□□□□□ -2.58
COPS3-206ENST00000471414 LY75O60449 1722 aa-1.09□□□□□ -2.58
COPS3-206ENST00000471414 LAMA3Q16787 3333 aa-1.09□□□□□ -2.58
COPS3-206ENST00000471414 IGLV5-48A0A075B6I7 105 aa-1.09□□□□□ -2.58
COPS3-206ENST00000471414 MYO5CQ9NQX4 1742 aa-1.09□□□□□ -2.58
COPS3-206ENST00000471414 USP9XQ93008 2570 aaPredicted RBP-1.09□□□□□ -2.58
COPS3-206ENST00000471414 MMP24-AS1A0A0U1RRL7 71 aa-1.1□□□□□ -2.59
COPS3-206ENST00000471414 CMYA5Q8N3K9 4069 aa-1.1□□□□□ -2.59
COPS3-206ENST00000471414 H3BVH4 76 aa-1.11□□□□□ -2.59
COPS3-206ENST00000471414 TNP1P09430 55 aa-1.11□□□□□ -2.59
COPS3-206ENST00000471414 C3P01024 1663 aa-1.11□□□□□ -2.59
COPS3-206ENST00000471414 RRBP1Q9P2E9 1410 aaKnown RBP-1.12□□□□□ -2.59
COPS3-206ENST00000471414 DNHD1Q96M86 4753 aa-1.12□□□□□ -2.59
COPS3-206ENST00000471414 TEX15Q9BXT5 2789 aa-1.13□□□□□ -2.59
COPS3-206ENST00000471414 TLN2Q9Y4G6 2542 aa-1.13□□□□□ -2.59
COPS3-206ENST00000471414 H3BUA1 57 aa-1.13□□□□□ -2.59
COPS3-206ENST00000471414 CLPSL2Q6UWE3 100 aa-1.13□□□□□ -2.59
COPS3-206ENST00000471414 C6orf48Q9UBA6 75 aa-1.13□□□□□ -2.59
COPS3-206ENST00000471414 MROH1Q8NDA8 1641 aa-1.14□□□□□ -2.59
COPS3-206ENST00000471414 SPENQ96T58 3664 aaKnown RBP-1.14□□□□□ -2.59
COPS3-206ENST00000471414 DEFB114Q30KQ6 69 aa-1.14□□□□□ -2.59
COPS3-206ENST00000471414 COL6A5A8TX70 2615 aa-1.14□□□□□ -2.59
COPS3-206ENST00000471414 DIP2AQ14689 1571 aa-1.14□□□□□ -2.59
COPS3-206ENST00000471414 NIPBLQ6KC79 2804 aaeCLIP-1.14□□□□□ -2.59
COPS3-206ENST00000471414 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.14□□□□□ -2.59
COPS3-206ENST00000471414 SMR3BP02814 79 aaPredicted RBP-1.15□□□□□ -2.59
COPS3-206ENST00000471414 NCBP2-AS2Q69YL0 99 aa-1.15□□□□□ -2.59
COPS3-206ENST00000471414 CDC42BPAQ5VT25 1732 aa-1.15□□□□□ -2.59
COPS3-206ENST00000471414 ABCC6O95255 1503 aa-1.15□□□□□ -2.59
COPS3-206ENST00000471414 RIF1Q5UIP0 2472 aaKnown RBP-1.15□□□□□ -2.59
COPS3-206ENST00000471414 DNAH7Q8WXX0 4024 aa-1.16□□□□□ -2.59
COPS3-206ENST00000471414 CDC42BPGQ6DT37 1551 aa-1.16□□□□□ -2.59
COPS3-206ENST00000471414 FCER1GP30273 86 aa-1.16□□□□□ -2.6
COPS3-206ENST00000471414 KRTAP20-1Q3LI63 56 aa-1.16□□□□□ -2.6
COPS3-206ENST00000471414 NOP10Q9NPE3 64 aaKnown RBP-1.16□□□□□ -2.6
COPS3-206ENST00000471414 FRYQ5TBA9 3013 aa-1.17□□□□□ -2.6
COPS3-206ENST00000471414 CELSR3Q9NYQ7 3312 aa-1.17□□□□□ -2.6
COPS3-206ENST00000471414 SFTA3P0C7M3 94 aa-1.18□□□□□ -2.6
COPS3-206ENST00000471414 KRTAP8-1Q8IUC2 63 aa-1.18□□□□□ -2.6
COPS3-206ENST00000471414 COL12A1Q99715 3063 aa-1.18□□□□□ -2.6
COPS3-206ENST00000471414 DNMBPQ6XZF7 1577 aa-1.18□□□□□ -2.6
COPS3-206ENST00000471414 C5orf42Q9H799 3197 aa-1.18□□□□□ -2.6
COPS3-206ENST00000471414 ATXN8Q156A1 80 aa-1.19□□□□□ -2.6
COPS3-206ENST00000471414 IQGAP3Q86VI3 1631 aa-1.19□□□□□ -2.6
COPS3-206ENST00000471414 CLASP1Q7Z460 1538 aa-1.2□□□□□ -2.6
COPS3-206ENST00000471414 MT1XP80297 61 aa-1.2□□□□□ -2.6
COPS3-206ENST00000471414 SPTBN5Q9NRC6 3674 aaKnown RBP-1.2□□□□□ -2.6
COPS3-206ENST00000471414 ASXL1Q8IXJ9 1541 aa-1.2□□□□□ -2.6
COPS3-206ENST00000471414 MADDQ8WXG6 1647 aa-1.21□□□□□ -2.6
COPS3-206ENST00000471414 MAST1Q9Y2H9 1570 aa-1.21□□□□□ -2.6
COPS3-206ENST00000471414 ABCA9Q8IUA7 1624 aa-1.22□□□□□ -2.6
COPS3-206ENST00000471414 ITPR1Q14643 2758 aa-1.23□□□□□ -2.61
COPS3-206ENST00000471414 DYNC1H1Q14204 4646 aaKnown RBP-1.23□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms