RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 HELZ2Q9BYK8 2649 aaKnown RBP3.97□□□□□ -1.77
BRCA1-210ENST00000471181 A6NN06 94 aa3.97□□□□□ -1.77
BRCA1-210ENST00000471181 SVEP1Q4LDE5 3571 aa3.97□□□□□ -1.77
BRCA1-210ENST00000471181 KRTAP1-3Q8IUG1 177 aa3.97□□□□□ -1.77
BRCA1-210ENST00000471181 KRTAP1-1Q07627 177 aa3.96□□□□□ -1.78
BRCA1-210ENST00000471181 HRNRQ86YZ3 2850 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-210ENST00000471181 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
BRCA1-210ENST00000471181 MGAQ8IWI9 3026 aa3.95□□□□□ -1.78
BRCA1-210ENST00000471181 UBR5O95071 2799 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-210ENST00000471181 A0A087X002 238 aa3.93□□□□□ -1.78
BRCA1-210ENST00000471181 STAB1Q9NY15 2570 aa3.93□□□□□ -1.78
BRCA1-210ENST00000471181 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
BRCA1-210ENST00000471181 KRTAP10-8P60410 259 aa3.92□□□□□ -1.78
BRCA1-210ENST00000471181 FBN2P35556 2912 aa3.91□□□□□ -1.78
BRCA1-210ENST00000471181 TENM4Q6N022 2769 aa3.9□□□□□ -1.78
BRCA1-210ENST00000471181 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
BRCA1-210ENST00000471181 CRYBG3Q68DQ2 2970 aa3.88□□□□□ -1.79
BRCA1-210ENST00000471181 PRRC2CQ9Y520 2896 aaKnown RBP3.88□□□□□ -1.79
BRCA1-210ENST00000471181 A0A1B0GVY2 172 aa3.87□□□□□ -1.79
BRCA1-210ENST00000471181 ASH1LQ9NR48 2969 aaKnown RBP3.87□□□□□ -1.79
BRCA1-210ENST00000471181 DSPP15924 2871 aaKnown RBP3.86□□□□□ -1.79
BRCA1-210ENST00000471181 KRTAP11-1Q8IUC1 163 aa3.85□□□□□ -1.79
BRCA1-210ENST00000471181 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-210ENST00000471181 PDZD2O15018 2839 aa3.85□□□□□ -1.79
BRCA1-210ENST00000471181 PP632Q6XCG6 107 aa3.84□□□□□ -1.8
BRCA1-210ENST00000471181 CELSR2Q9HCU4 2923 aa3.83□□□□□ -1.8
BRCA1-210ENST00000471181 CFAP46Q8IYW2 2715 aa3.83□□□□□ -1.8
BRCA1-210ENST00000471181 ITPR3Q14573 2671 aa3.82□□□□□ -1.8
BRCA1-210ENST00000471181 CELSR1Q9NYQ6 3014 aa3.82□□□□□ -1.8
BRCA1-210ENST00000471181 FLNAP21333 2647 aaKnown RBP3.82□□□□□ -1.8
BRCA1-210ENST00000471181 TEP1Q99973 2627 aaKnown RBP3.81□□□□□ -1.8
BRCA1-210ENST00000471181 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
BRCA1-210ENST00000471181 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
BRCA1-210ENST00000471181 RPS29P62273 56 aaKnown RBP3.8□□□□□ -1.8
BRCA1-210ENST00000471181 BAHCC1Q9P281 2608 aa3.79□□□□□ -1.8
BRCA1-210ENST00000471181 ADGRG4Q8IZF6 3080 aa3.78□□□□□ -1.8
BRCA1-210ENST00000471181 DNAH1Q9P2D7 4330 aa3.78□□□□□ -1.8
BRCA1-210ENST00000471181 UTP20O75691 2785 aaKnown RBP3.77□□□□□ -1.81
BRCA1-210ENST00000471181 LRBAP50851 2863 aa3.77□□□□□ -1.81
BRCA1-210ENST00000471181 IGSF10Q6WRI0 2623 aa3.77□□□□□ -1.81
BRCA1-210ENST00000471181 NOTCH1P46531 2555 aa3.76□□□□□ -1.81
BRCA1-210ENST00000471181 DNAH7Q8WXX0 4024 aa3.76□□□□□ -1.81
BRCA1-210ENST00000471181 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
BRCA1-210ENST00000471181 Q6ZRN7 208 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-210ENST00000471181 COL6A5A8TX70 2615 aa3.74□□□□□ -1.81
BRCA1-210ENST00000471181 KRTAP10-10P60014 251 aa3.74□□□□□ -1.81
BRCA1-210ENST00000471181 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
BRCA1-210ENST00000471181 CENPEQ02224 2701 aa3.72□□□□□ -1.81
BRCA1-210ENST00000471181 PRKDCP78527 4128 aaKnown RBP3.71□□□□□ -1.82
BRCA1-210ENST00000471181 TRRAPQ9Y4A5 3859 aa3.71□□□□□ -1.82
BRCA1-210ENST00000471181 LYSTQ99698 3801 aa3.71□□□□□ -1.82
BRCA1-210ENST00000471181 TEX15Q9BXT5 2789 aa3.69□□□□□ -1.82
BRCA1-210ENST00000471181 OTOGQ6ZRI0 2925 aa3.69□□□□□ -1.82
BRCA1-210ENST00000471181 CSMD3Q7Z407 3707 aa3.67□□□□□ -1.82
BRCA1-210ENST00000471181 DMBT1Q9UGM3 2413 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-210ENST00000471181 NBEAL1Q6ZS30 2694 aa3.65□□□□□ -1.83
BRCA1-210ENST00000471181 DNAH6Q9C0G6 4158 aa3.65□□□□□ -1.83
BRCA1-210ENST00000471181 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
BRCA1-210ENST00000471181 H0YAA0 97 aa3.64□□□□□ -1.83
BRCA1-210ENST00000471181 UNC79Q9P2D8 2635 aa3.64□□□□□ -1.83
BRCA1-210ENST00000471181 COL12A1Q99715 3063 aa3.64□□□□□ -1.83
BRCA1-210ENST00000471181 KRTAP7-1Q8IUC3 87 aa3.63□□□□□ -1.83
BRCA1-210ENST00000471181 XP32Q5T750 250 aa3.63□□□□□ -1.83
BRCA1-210ENST00000471181 KRTAP21-3Q3LHN1 58 aa3.62□□□□□ -1.83
BRCA1-210ENST00000471181 APCP25054 2843 aa3.61□□□□□ -1.83
BRCA1-210ENST00000471181 TACC2O95359 2948 aa3.61□□□□□ -1.83
BRCA1-210ENST00000471181 KRTAP13-1Q8IUC0 172 aa3.61□□□□□ -1.83
BRCA1-210ENST00000471181 FLNCQ14315 2725 aa3.6□□□□□ -1.83
BRCA1-210ENST00000471181 GCN1Q92616 2671 aaKnown RBP3.6□□□□□ -1.83
BRCA1-210ENST00000471181 STAB2Q8WWQ8 2551 aa3.6□□□□□ -1.83
BRCA1-210ENST00000471181 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
BRCA1-210ENST00000471181 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
BRCA1-210ENST00000471181 DNAH9Q9NYC9 4486 aa3.56□□□□□ -1.84
BRCA1-210ENST00000471181 CHD6Q8TD26 2715 aa3.55□□□□□ -1.84
BRCA1-210ENST00000471181 DNHD1Q96M86 4753 aa3.55□□□□□ -1.84
BRCA1-210ENST00000471181 MXRA5Q9NR99 2828 aa3.54□□□□□ -1.84
BRCA1-210ENST00000471181 MAP1AP78559 2803 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-210ENST00000471181 NSD1Q96L73 2696 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-210ENST00000471181 KRTAP15-1Q3LI76 137 aa3.5□□□□□ -1.85
BRCA1-210ENST00000471181 TPRXLQ17RH7 258 aa3.49□□□□□ -1.85
BRCA1-210ENST00000471181 HECTD4Q9Y4D8 3996 aa3.49□□□□□ -1.85
BRCA1-210ENST00000471181 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
BRCA1-210ENST00000471181 FBN1P35555 2871 aaKnown RBP3.47□□□□□ -1.85
BRCA1-210ENST00000471181 VPS13DQ5THJ4 4388 aa3.46□□□□□ -1.85
BRCA1-210ENST00000471181 PKD1P98161 4303 aa3.46□□□□□ -1.86
BRCA1-210ENST00000471181 DNAH2Q9P225 4427 aa3.46□□□□□ -1.86
BRCA1-210ENST00000471181 ZANQ9Y493 2812 aa3.45□□□□□ -1.86
BRCA1-210ENST00000471181 FAT2Q9NYQ8 4349 aa3.45□□□□□ -1.86
BRCA1-210ENST00000471181 KRTAP1-4P0C5Y4 121 aa3.45□□□□□ -1.86
BRCA1-210ENST00000471181 PKHD1L1Q86WI1 4243 aa3.44□□□□□ -1.86
BRCA1-210ENST00000471181 NF1P21359 2839 aa3.44□□□□□ -1.86
BRCA1-210ENST00000471181 KRTAP13-4Q3LI77 160 aa3.43□□□□□ -1.86
BRCA1-210ENST00000471181 ALMS1Q8TCU4 4167 aa3.43□□□□□ -1.86
BRCA1-210ENST00000471181 STARD9Q9P2P6 4700 aa3.43□□□□□ -1.86
BRCA1-210ENST00000471181 PKHD1P08F94 4074 aa3.43□□□□□ -1.86
BRCA1-210ENST00000471181 ITPR2Q14571 2701 aa3.42□□□□□ -1.86
BRCA1-210ENST00000471181 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
BRCA1-210ENST00000471181 DNAH11Q96DT5 4516 aa3.4□□□□□ -1.87
BRCA1-210ENST00000471181 HIVEP1P15822 2718 aa3.39□□□□□ -1.87
BRCA1-210ENST00000471181 DNAH17Q9UFH2 4485 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms