RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 HIST1H2BOP23527 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BBP33778 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BDP58876 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BCP62807 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST2H2BEQ16778 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BHQ93079 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BNQ99877 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 HIST1H2BMQ99879 126 aa4.27□□□□□ -1.73
XRN1-208ENST00000470537 H0YGX0 51 aa4.26□□□□□ -1.73
XRN1-208ENST00000470537 HSBP1L1C9JCN9 74 aa4.24□□□□□ -1.73
XRN1-208ENST00000470537 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
XRN1-208ENST00000470537 ATOH7Q8N100 152 aa4.24□□□□□ -1.73
XRN1-208ENST00000470537 TRBV7-4A0A0J9YYF1 115 aa4.23□□□□□ -1.73
XRN1-208ENST00000470537 FABP2P12104 132 aa4.23□□□□□ -1.73
XRN1-208ENST00000470537 SPINK7P58062 85 aa4.23□□□□□ -1.73
XRN1-208ENST00000470537 IGHV6-1A0A0B4J1U7 121 aa4.22□□□□□ -1.73
XRN1-208ENST00000470537 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
XRN1-208ENST00000470537 ANKRD29Q8N6D5 301 aa4.22□□□□□ -1.73
XRN1-208ENST00000470537 A0A1B0GX51 115 aa4.21□□□□□ -1.74
XRN1-208ENST00000470537 H3BQ85 93 aa4.21□□□□□ -1.74
XRN1-208ENST00000470537 COA6Q5JTJ3 125 aaKnown RBP4.21□□□□□ -1.74
XRN1-208ENST00000470537 ZCCHC13Q8WW36 166 aaKnown RBP4.21□□□□□ -1.74
XRN1-208ENST00000470537 RAB37Q96AX2 223 aa4.21□□□□□ -1.74
XRN1-208ENST00000470537 HIST1H4GQ99525 98 aa4.21□□□□□ -1.74
XRN1-208ENST00000470537 A0A1W2PNM2 257 aa4.2□□□□□ -1.74
XRN1-208ENST00000470537 KRTAP20-1Q3LI63 56 aa4.19□□□□□ -1.74
XRN1-208ENST00000470537 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
XRN1-208ENST00000470537 LINC00472Q9H8W2 130 aa4.19□□□□□ -1.74
XRN1-208ENST00000470537 TRACP01848 142 aa4.18□□□□□ -1.74
XRN1-208ENST00000470537 LYRM7Q5U5X0 104 aa4.18□□□□□ -1.74
XRN1-208ENST00000470537 KRTAP4-4Q9BYR3 166 aa4.18□□□□□ -1.74
XRN1-208ENST00000470537 NEBP20929 6669 aa4.18□□□□□ -1.74
XRN1-208ENST00000470537 A0A1B0GVX0 72 aa4.17□□□□□ -1.74
XRN1-208ENST00000470537 DEFB116Q30KQ4 102 aa4.17□□□□□ -1.74
XRN1-208ENST00000470537 WFDC13Q8IUB5 93 aa4.17□□□□□ -1.74
XRN1-208ENST00000470537 FAM218AQ96MZ4 157 aa4.17□□□□□ -1.74
XRN1-208ENST00000470537 DSCR8Q96T75 97 aa4.17□□□□□ -1.74
XRN1-208ENST00000470537 DNAL4O96015 105 aa4.16□□□□□ -1.74
XRN1-208ENST00000470537 J3KT08 172 aa4.15□□□□□ -1.75
XRN1-208ENST00000470537 TMEM256-PLSCR3K7ERE1 68 aa4.15□□□□□ -1.75
XRN1-208ENST00000470537 NDUFB1O75438 58 aa4.15□□□□□ -1.75
XRN1-208ENST00000470537 CCKP06307 115 aa4.15□□□□□ -1.75
XRN1-208ENST00000470537 KRTAP5-9P26371 169 aa4.15□□□□□ -1.75
XRN1-208ENST00000470537 A6NN06 94 aa4.14□□□□□ -1.75
XRN1-208ENST00000470537 A0A0B4J2C4 111 aa4.13□□□□□ -1.75
XRN1-208ENST00000470537 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
XRN1-208ENST00000470537 ORMDL1Q9P0S3 153 aa4.13□□□□□ -1.75
XRN1-208ENST00000470537 MUC12Q9UKN1 5478 aa4.13□□□□□ -1.75
XRN1-208ENST00000470537 S100A2P29034 98 aa4.12□□□□□ -1.75
XRN1-208ENST00000470537 DLEU1O43261 78 aa4.1□□□□□ -1.75
XRN1-208ENST00000470537 PRO1854Q9UHT4 67 aa4.1□□□□□ -1.75
XRN1-208ENST00000470537 IGKV3D-7A0A0C4DH55 119 aa4.09□□□□□ -1.75
XRN1-208ENST00000470537 KRTAP9-6A8MVA2 160 aa4.09□□□□□ -1.75
XRN1-208ENST00000470537 COX8AP10176 69 aa4.09□□□□□ -1.75
XRN1-208ENST00000470537 VPS25Q9BRG1 176 aa4.09□□□□□ -1.75
XRN1-208ENST00000470537 A0A1B0GV72 72 aa4.08□□□□□ -1.76
XRN1-208ENST00000470537 COX6CP09669 75 aa4.08□□□□□ -1.76
XRN1-208ENST00000470537 RBM3P98179 157 aaKnown RBP4.07□□□□□ -1.76
XRN1-208ENST00000470537 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
XRN1-208ENST00000470537 Q5VV11 94 aa4.06□□□□□ -1.76
XRN1-208ENST00000470537 PSMB2P49721 201 aa4.05□□□□□ -1.76
XRN1-208ENST00000470537 HIST1H2BLQ99880 126 aa4.05□□□□□ -1.76
XRN1-208ENST00000470537 FAM236AA0A1B0GUQ0 79 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 FAM236BA0A1B0GV22 79 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 C9JAW5 83 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 Q6ZVQ6 151 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 HIST3H2BBQ8N257 126 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 C8orf17Q9NRJ1 99 aa4.04□□□□□ -1.76
XRN1-208ENST00000470537 A0A1B0GW54 56 aa4.03□□□□□ -1.76
XRN1-208ENST00000470537 KRTAP2-3P0C7H8 128 aa4.03□□□□□ -1.76
XRN1-208ENST00000470537 C2orf91Q6ZV80 131 aa4.03□□□□□ -1.76
XRN1-208ENST00000470537 CEND1Q8N111 149 aa4.03□□□□□ -1.76
XRN1-208ENST00000470537 KRTAP2-4Q9BYR9 128 aa4.03□□□□□ -1.76
XRN1-208ENST00000470537 S100A6P06703 90 aa4.02□□□□□ -1.77
XRN1-208ENST00000470537 Q6ZQT0 140 aa4.02□□□□□ -1.77
XRN1-208ENST00000470537 C14orf144Q96I85 54 aa4.01□□□□□ -1.77
XRN1-208ENST00000470537 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
XRN1-208ENST00000470537 KMT2DO14686 5537 aa3.99□□□□□ -1.77
XRN1-208ENST00000470537 C7orf65Q6ZTY9 151 aa3.98□□□□□ -1.77
XRN1-208ENST00000470537 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
XRN1-208ENST00000470537 NDUFS5O43920 106 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 MT1BP07438 61 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 S100A1P23297 94 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 KRTAP19-8Q3LI54 63 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 TMEM254Q8TBM7 123 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 IMUPQ9GZP8 106 aa3.97□□□□□ -1.77
XRN1-208ENST00000470537 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
XRN1-208ENST00000470537 PDE6GP18545 87 aa3.96□□□□□ -1.78
XRN1-208ENST00000470537 SPATA45Q537H7 98 aa3.96□□□□□ -1.78
XRN1-208ENST00000470537 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 FXYD2P54710 66 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 C5orf47Q569G3 176 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 CSAG1Q6PB30 78 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
XRN1-208ENST00000470537 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
XRN1-208ENST00000470537 BAALC-AS2P0C853 105 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms